RNA–Protein interactions for RNA: ENST00000529006.6

KDM2A-210, Transcript of lysine demethylase 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM2A, Length 6,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-210ENST00000529006 LDHBP07195 334 aaKnown RBP13.75□□□□□ -0.21
KDM2A-210ENST00000529006 PARP1P09874 1014 aaKnown RBP13.75□□□□□ -0.21
KDM2A-210ENST00000529006 EPB41P11171 864 aaKnown RBP13.75□□□□□ -0.21
KDM2A-210ENST00000529006 EIF6P56537 245 aaKnown RBP13.75□□□□□ -0.21
KDM2A-210ENST00000529006 SPAG1Q07617 926 aa13.75□□□□□ -0.21
KDM2A-210ENST00000529006 SAMD15Q9P1V8 674 aa13.75□□□□□ -0.21
KDM2A-210ENST00000529006 RTCBQ9Y3I0 505 aaKnown RBP13.75□□□□□ -0.21
KDM2A-210ENST00000529006 TTLL3Q9Y4R7 772 aa13.75□□□□□ -0.21
KDM2A-210ENST00000529006 RIOK3O14730 519 aaKnown RBP13.75□□□□□ -0.21
KDM2A-210ENST00000529006 RBM17Q96I25 401 aaKnown RBP13.75□□□□□ -0.21
KDM2A-210ENST00000529006 FAM135AQ9P2D6 1515 aa13.75□□□□□ -0.21
KDM2A-210ENST00000529006 EHBP1L1Q8N3D4 1523 aa13.75□□□□□ -0.21
KDM2A-210ENST00000529006 JAKMIP2Q96AA8 810 aa13.75□□□□□ -0.21
KDM2A-210ENST00000529006 NOP56O00567 594 aaKnown RBP13.75□□□□□ -0.21
KDM2A-210ENST00000529006 ANO3Q9BYT9 981 aa13.75□□□□□ -0.21
KDM2A-210ENST00000529006 PAG1Q9NWQ8 432 aa13.75□□□□□ -0.21
KDM2A-210ENST00000529006 STRN3Q13033 797 aa13.75□□□□□ -0.21
KDM2A-210ENST00000529006 CALCOCO2Q13137 446 aa13.75□□□□□ -0.21
KDM2A-210ENST00000529006 CLUL1Q15846 466 aa13.75□□□□□ -0.21
KDM2A-210ENST00000529006 DTHD1Q6ZMT9 781 aa13.75□□□□□ -0.21
KDM2A-210ENST00000529006 COPS6Q7L5N1 327 aa13.75□□□□□ -0.21
KDM2A-210ENST00000529006 USP48Q86UV5 1035 aa13.75□□□□□ -0.21
KDM2A-210ENST00000529006 STMN2Q93045 179 aa13.75□□□□□ -0.21
KDM2A-210ENST00000529006 INTS8Q75QN2 995 aaKnown RBP13.74□□□□□ -0.21
KDM2A-210ENST00000529006 CEP120Q8N960 986 aa13.74□□□□□ -0.21
KDM2A-210ENST00000529006 NOP9Q86U38 636 aaKnown RBP13.74□□□□□ -0.21
KDM2A-210ENST00000529006 RHPN1Q8TCX5 695 aa13.74□□□□□ -0.21
KDM2A-210ENST00000529006 STIM2Q9P246 746 aa13.74□□□□□ -0.21
KDM2A-210ENST00000529006 UVSSAQ2YD98 709 aa13.74□□□□□ -0.21
KDM2A-210ENST00000529006 FCHSD1Q86WN1 690 aa13.74□□□□□ -0.21
KDM2A-210ENST00000529006 CCDC110Q8TBZ0 833 aa13.74□□□□□ -0.21
KDM2A-210ENST00000529006 DMRT2Q9Y5R5 561 aa13.74□□□□□ -0.21
KDM2A-210ENST00000529006 SPOPO43791 374 aa13.74□□□□□ -0.21
KDM2A-210ENST00000529006 STK10O94804 968 aaKnown RBP13.74□□□□□ -0.21
KDM2A-210ENST00000529006 NMIQ13287 307 aaPredicted RBP13.74□□□□□ -0.21
KDM2A-210ENST00000529006 TTC21BQ7Z4L5 1316 aa13.74□□□□□ -0.21
KDM2A-210ENST00000529006 PTPDC1A2A3K4 754 aa13.74□□□□□ -0.21
KDM2A-210ENST00000529006 GIPC1O14908 333 aa13.74□□□□□ -0.21
KDM2A-210ENST00000529006 ZBTB24O43167 697 aaPredicted RBP13.74□□□□□ -0.21
KDM2A-210ENST00000529006 ATXN8OSP0DMR3 200 aa13.74□□□□□ -0.21
KDM2A-210ENST00000529006 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.74□□□□□ -0.21
KDM2A-210ENST00000529006 FEZ2Q9UHY8 353 aaPredicted RBP13.74□□□□□ -0.21
KDM2A-210ENST00000529006 CALML3P27482 149 aa13.74□□□□□ -0.21
KDM2A-210ENST00000529006 LMBR1LQ6UX01 489 aa13.74□□□□□ -0.21
KDM2A-210ENST00000529006 TMX3Q96JJ7 454 aa13.74□□□□□ -0.21
KDM2A-210ENST00000529006 UIMC1Q96RL1 719 aa13.74□□□□□ -0.21
KDM2A-210ENST00000529006 APOBRQ0VD83 1088 aa13.73□□□□□ -0.21
KDM2A-210ENST00000529006 EYA3Q99504 573 aa13.73□□□□□ -0.21
KDM2A-210ENST00000529006 FAM170AA1A519 330 aa13.73□□□□□ -0.21
KDM2A-210ENST00000529006 CCT6AP40227 531 aaKnown RBP13.73□□□□□ -0.21
KDM2A-210ENST00000529006 RNASE9P60153 205 aaKnown RBP13.73□□□□□ -0.21
KDM2A-210ENST00000529006 DDB1Q16531 1140 aa13.73□□□□□ -0.21
KDM2A-210ENST00000529006 DAPK1P53355 1430 aa13.73□□□□□ -0.21
KDM2A-210ENST00000529006 VIMP08670 466 aaKnown RBP13.73□□□□□ -0.21
KDM2A-210ENST00000529006 PLCG2P16885 1265 aa13.73□□□□□ -0.21
KDM2A-210ENST00000529006 PPARDQ03181 441 aa13.73□□□□□ -0.21
KDM2A-210ENST00000529006 FMNL3Q8IVF7 1028 aa13.73□□□□□ -0.21
KDM2A-210ENST00000529006 FNBP4Q8N3X1 1017 aaPredicted RBP13.73□□□□□ -0.21
KDM2A-210ENST00000529006 FAM184BQ9ULE4 1060 aa13.73□□□□□ -0.21
KDM2A-210ENST00000529006 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.73□□□□□ -0.21
KDM2A-210ENST00000529006 HECW1Q76N89 1606 aa13.73□□□□□ -0.21
KDM2A-210ENST00000529006 CLGNO14967 610 aa13.73□□□□□ -0.21
KDM2A-210ENST00000529006 TNFAIP3P21580 790 aa13.73□□□□□ -0.21
KDM2A-210ENST00000529006 GKAP1Q5VSY0 366 aaPredicted RBP13.73□□□□□ -0.21
KDM2A-210ENST00000529006 FBXO31Q5XUX0 539 aaPredicted RBP13.73□□□□□ -0.21
KDM2A-210ENST00000529006 USTQ9Y2C2 406 aa13.73□□□□□ -0.21
KDM2A-210ENST00000529006 BRDTQ58F21 947 aaPredicted RBP13.73□□□□□ -0.21
KDM2A-210ENST00000529006 IVLP07476 585 aa13.72□□□□□ -0.21
KDM2A-210ENST00000529006 ZNF174Q15697 407 aa13.72□□□□□ -0.21
KDM2A-210ENST00000529006 LETM2Q2VYF4 491 aa13.72□□□□□ -0.21
KDM2A-210ENST00000529006 CCDC186Q7Z3E2 898 aa13.72□□□□□ -0.21
KDM2A-210ENST00000529006 CCDC141Q6ZP82 1450 aa13.72□□□□□ -0.21
KDM2A-210ENST00000529006 TSGA10Q9BZW7 698 aa13.72□□□□□ -0.21
KDM2A-210ENST00000529006 ERCC6LQ2NKX8 1250 aa13.72□□□□□ -0.21
KDM2A-210ENST00000529006 SV2BQ7L1I2 683 aa13.72□□□□□ -0.21
KDM2A-210ENST00000529006 KRT222Q8N1A0 295 aa13.72□□□□□ -0.21
KDM2A-210ENST00000529006 IFT74Q96LB3 600 aa13.72□□□□□ -0.21
KDM2A-210ENST00000529006 NKIRAS1Q9NYS0 192 aa13.72□□□□□ -0.21
KDM2A-210ENST00000529006 TPTE2Q6XPS3 522 aa13.72□□□□□ -0.21
KDM2A-210ENST00000529006 NSMCE1Q8WV22 266 aa13.72□□□□□ -0.21
KDM2A-210ENST00000529006 PA2G4Q9UQ80 394 aaKnown RBP13.72□□□□□ -0.21
KDM2A-210ENST00000529006 MSH6P52701 1360 aa13.72□□□□□ -0.21
KDM2A-210ENST00000529006 SPTLC2O15270 562 aa13.72□□□□□ -0.21
KDM2A-210ENST00000529006 KRT19P08727 400 aa13.72□□□□□ -0.21
KDM2A-210ENST00000529006 GNA11P29992 359 aa13.72□□□□□ -0.21
KDM2A-210ENST00000529006 SMTNP53814 917 aa13.72□□□□□ -0.21
KDM2A-210ENST00000529006 GPR161Q8N6U8 529 aaKnown RBP13.72□□□□□ -0.21
KDM2A-210ENST00000529006 CCNT1O60563 726 aaKnown RBP13.72□□□□□ -0.21
KDM2A-210ENST00000529006 CAPN2P17655 700 aa13.72□□□□□ -0.21
KDM2A-210ENST00000529006 TNNC1P63316 161 aa13.72□□□□□ -0.21
KDM2A-210ENST00000529006 IVNS1ABPQ9Y6Y0 642 aa13.72□□□□□ -0.21
KDM2A-210ENST00000529006 GNAT2P19087 354 aa13.71□□□□□ -0.21
KDM2A-210ENST00000529006 DNM1Q05193 864 aaKnown RBP13.71□□□□□ -0.21
KDM2A-210ENST00000529006 FYB2Q5VWT5 728 aa13.71□□□□□ -0.21
KDM2A-210ENST00000529006 CCDC89Q8N998 374 aa13.71□□□□□ -0.21
KDM2A-210ENST00000529006 HGSO14964 777 aaPredicted RBP13.71□□□□□ -0.21
KDM2A-210ENST00000529006 DIXDC1Q155Q3 683 aa13.71□□□□□ -0.21
KDM2A-210ENST00000529006 LIN9Q5TKA1 542 aa13.71□□□□□ -0.21
KDM2A-210ENST00000529006 DACT1Q9NYF0 836 aa13.71□□□□□ -0.22
KDM2A-210ENST00000529006 VWA3AA6NCI4 1184 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms