RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 WWC3Q9ULE0 1092 aa9.55□□□□□ -0.88
SORL1-207ENST00000528339 PDE6AP16499 860 aa9.55□□□□□ -0.88
SORL1-207ENST00000528339 APPBP2Q92624 585 aa9.55□□□□□ -0.88
SORL1-207ENST00000528339 FAM227BQ96M60 508 aa9.55□□□□□ -0.88
SORL1-207ENST00000528339 PTH1RQ03431 593 aa9.54□□□□□ -0.88
SORL1-207ENST00000528339 SBK1Q52WX2 424 aa9.54□□□□□ -0.88
SORL1-207ENST00000528339 MPHOSPH8Q99549 860 aa9.54□□□□□ -0.88
SORL1-207ENST00000528339 PUS7LQ9H0K6 701 aaKnown RBP9.54□□□□□ -0.88
SORL1-207ENST00000528339 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.54□□□□□ -0.88
SORL1-207ENST00000528339 UTRNP46939 3433 aa9.54□□□□□ -0.88
SORL1-207ENST00000528339 IFIT1P09914 478 aaKnown RBP9.54□□□□□ -0.88
SORL1-207ENST00000528339 YBX3P16989 372 aaKnown RBP eCLIP9.54□□□□□ -0.881e-6■□□□□ 11.2
SORL1-207ENST00000528339 HIBADHP31937 336 aaKnown RBP9.54□□□□□ -0.88
SORL1-207ENST00000528339 HHIPL2Q6UWX4 724 aa9.54□□□□□ -0.88
SORL1-207ENST00000528339 MROH7-TTC4A0A0A0MT08 1334 aa9.54□□□□□ -0.88
SORL1-207ENST00000528339 ZBTB7AO95365 584 aa9.54□□□□□ -0.88
SORL1-207ENST00000528339 CCDC93Q567U6 631 aa9.54□□□□□ -0.88
SORL1-207ENST00000528339 RGS22Q8NE09 1264 aa9.54□□□□□ -0.88
SORL1-207ENST00000528339 HELBQ8NG08 1087 aaPredicted RBP9.53□□□□□ -0.88
SORL1-207ENST00000528339 PIM2Q9P1W9 311 aa9.53□□□□□ -0.88
SORL1-207ENST00000528339 MYO3BQ8WXR4 1341 aa9.53□□□□□ -0.88
SORL1-207ENST00000528339 PLXNB2O15031 1838 aa9.53□□□□□ -0.88
SORL1-207ENST00000528339 A0A0G2JLW4 131 aa9.53□□□□□ -0.88
SORL1-207ENST00000528339 GSG1L2A8MUP6 293 aa9.53□□□□□ -0.88
SORL1-207ENST00000528339 EXOSC10Q01780 885 aaKnown RBP9.53□□□□□ -0.88
SORL1-207ENST00000528339 GABPAQ06546 454 aa9.53□□□□□ -0.88
SORL1-207ENST00000528339 GPATCH3Q96I76 525 aa9.53□□□□□ -0.88
SORL1-207ENST00000528339 L3MBTL3Q96JM7 780 aaPredicted RBP9.53□□□□□ -0.88
SORL1-207ENST00000528339 ZDHHC15Q96MV8 337 aa9.53□□□□□ -0.88
SORL1-207ENST00000528339 SUPT20HQ8NEM7 779 aa9.53□□□□□ -0.88
SORL1-207ENST00000528339 CCDC85AQ96PX6 553 aaPredicted RBP9.53□□□□□ -0.88
SORL1-207ENST00000528339 MTA3Q9BTC8 594 aa9.53□□□□□ -0.88
SORL1-207ENST00000528339 TAF6LQ9Y6J9 622 aa9.53□□□□□ -0.88
SORL1-207ENST00000528339 MECOMQ03112 1051 aa9.52□□□□□ -0.89
SORL1-207ENST00000528339 MCMDC2Q4G0Z9 681 aa9.52□□□□□ -0.89
SORL1-207ENST00000528339 MPNDQ8N594 471 aa9.52□□□□□ -0.89
SORL1-207ENST00000528339 IDI2Q9BXS1 227 aa9.52□□□□□ -0.89
SORL1-207ENST00000528339 SPON1Q9HCB6 807 aa9.52□□□□□ -0.89
SORL1-207ENST00000528339 NDUFB9Q9Y6M9 179 aa9.52□□□□□ -0.89
SORL1-207ENST00000528339 IGKV6D-41A0A0C4DH26 115 aa9.52□□□□□ -0.89
SORL1-207ENST00000528339 SLFNL1Q499Z3 407 aa9.52□□□□□ -0.89
SORL1-207ENST00000528339 CCDC158Q5M9N0 1113 aa9.52□□□□□ -0.89
SORL1-207ENST00000528339 STOX1Q6ZVD7 989 aa9.52□□□□□ -0.89
SORL1-207ENST00000528339 BOLA2Q9H3K6 86 aa9.52□□□□□ -0.89
SORL1-207ENST00000528339 PALD1Q9ULE6 856 aa9.52□□□□□ -0.89
SORL1-207ENST00000528339 ST3GAL1Q11201 340 aa9.52□□□□□ -0.89
SORL1-207ENST00000528339 APOBEC3HQ6NTF7 200 aaKnown RBP9.52□□□□□ -0.89
SORL1-207ENST00000528339 ZNF804AQ7Z570 1209 aa9.52□□□□□ -0.89
SORL1-207ENST00000528339 HSPD1P10809 573 aaKnown RBP9.51□□□□□ -0.89
SORL1-207ENST00000528339 WDR66Q8TBY9 1149 aa9.51□□□□□ -0.89
SORL1-207ENST00000528339 SYT17Q9BSW7 474 aa9.51□□□□□ -0.89
SORL1-207ENST00000528339 ZSWIM6Q9HCJ5 1215 aa9.51□□□□□ -0.89
SORL1-207ENST00000528339 SERPINA10Q9UK55 444 aa9.51□□□□□ -0.89
SORL1-207ENST00000528339 APBB1O00213 710 aa9.51□□□□□ -0.89
SORL1-207ENST00000528339 FKBP1CQ5VVH2 108 aa9.51□□□□□ -0.89
SORL1-207ENST00000528339 CERS3Q8IU89 383 aa9.51□□□□□ -0.89
SORL1-207ENST00000528339 UFL1O94874 794 aa9.51□□□□□ -0.89
SORL1-207ENST00000528339 TBC1D22AQ8WUA7 517 aa9.51□□□□□ -0.89
SORL1-207ENST00000528339 ANKS1AQ92625 1134 aa9.51□□□□□ -0.89
SORL1-207ENST00000528339 SEC62Q99442 399 aaKnown RBP9.51□□□□□ -0.89
SORL1-207ENST00000528339 KCNQ5Q9NR82 932 aa9.51□□□□□ -0.89
SORL1-207ENST00000528339 SNX14Q9Y5W7 946 aa9.51□□□□□ -0.89
SORL1-207ENST00000528339 ZNF532Q9HCE3 1301 aa9.5□□□□□ -0.89
SORL1-207ENST00000528339 FAM177BA6PVY3 158 aa9.5□□□□□ -0.89
SORL1-207ENST00000528339 ECE2O60344 883 aa9.5□□□□□ -0.89
SORL1-207ENST00000528339 EIF5BO60841 1220 aaKnown RBP9.5□□□□□ -0.89
SORL1-207ENST00000528339 IARSP41252 1262 aaKnown RBP9.5□□□□□ -0.89
SORL1-207ENST00000528339 VPS53Q5VIR6 699 aa9.5□□□□□ -0.89
SORL1-207ENST00000528339 AGBL3Q8NEM8 1001 aa9.5□□□□□ -0.89
SORL1-207ENST00000528339 FHDC1Q9C0D6 1143 aaPredicted RBP9.5□□□□□ -0.89
SORL1-207ENST00000528339 TTC39AQ5SRH9 613 aa9.5□□□□□ -0.89
SORL1-207ENST00000528339 RASEFQ8IZ41 740 aa9.5□□□□□ -0.89
SORL1-207ENST00000528339 GPR101Q96P66 508 aaPredicted RBP9.5□□□□□ -0.89
SORL1-207ENST00000528339 POTECB2RU33 542 aa9.49□□□□□ -0.89
SORL1-207ENST00000528339 PRDX5P30044 214 aa9.49□□□□□ -0.89
SORL1-207ENST00000528339 MB21D2Q8IYB1 491 aaPredicted RBP9.49□□□□□ -0.89
SORL1-207ENST00000528339 GOLIM4O00461 696 aa9.49□□□□□ -0.89
SORL1-207ENST00000528339 POLD1P28340 1107 aa9.49□□□□□ -0.89
SORL1-207ENST00000528339 RGS3P49796 1198 aa9.49□□□□□ -0.89
SORL1-207ENST00000528339 DALRD3Q5D0E6 543 aaKnown RBP9.49□□□□□ -0.89
SORL1-207ENST00000528339 EYA3Q99504 573 aa9.49□□□□□ -0.89
SORL1-207ENST00000528339 WDR81Q562E7 1941 aa9.49□□□□□ -0.89
SORL1-207ENST00000528339 WDHD1O75717 1129 aaPredicted RBP9.49□□□□□ -0.89
SORL1-207ENST00000528339 CUL4AQ13619 759 aa9.49□□□□□ -0.89
SORL1-207ENST00000528339 DPP8Q6V1X1 898 aaPredicted RBP9.49□□□□□ -0.89
SORL1-207ENST00000528339 ZGPATQ8N5A5 531 aaKnown RBP9.49□□□□□ -0.89
SORL1-207ENST00000528339 STAG1Q8WVM7 1258 aa9.49□□□□□ -0.89
SORL1-207ENST00000528339 EHD4Q9H223 541 aa9.49□□□□□ -0.89
SORL1-207ENST00000528339 PSDA5PKW4 1024 aaPredicted RBP9.48□□□□□ -0.89
SORL1-207ENST00000528339 SLC27A2O14975 620 aa9.48□□□□□ -0.89
SORL1-207ENST00000528339 CD2BP2O95400 341 aaKnown RBP9.48□□□□□ -0.89
SORL1-207ENST00000528339 LCORLQ8N3X6 602 aa9.48□□□□□ -0.89
SORL1-207ENST00000528339 ATF5Q9Y2D1 282 aaPredicted RBP9.48□□□□□ -0.89
SORL1-207ENST00000528339 CYP21A2P08686 494 aa9.48□□□□□ -0.89
SORL1-207ENST00000528339 RPS12P25398 132 aaKnown RBP9.48□□□□□ -0.89
SORL1-207ENST00000528339 CAVIN4Q5BKX8 364 aa9.48□□□□□ -0.89
SORL1-207ENST00000528339 RSBN1LQ6PCB5 846 aaPredicted RBP9.48□□□□□ -0.89
SORL1-207ENST00000528339 NPM2Q86SE8 214 aaKnown RBP9.48□□□□□ -0.89
SORL1-207ENST00000528339 DPF2Q92785 391 aa9.48□□□□□ -0.89
SORL1-207ENST00000528339 DAGLAQ9Y4D2 1042 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms