RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 KIF22Q14807 665 aa15.66■□□□□ 0.1
SRPRA-202ENST00000527817 CCDC27Q2M243 656 aa15.66■□□□□ 0.1
SRPRA-202ENST00000527817 MFSD14BQ5SR56 506 aa15.66■□□□□ 0.1
SRPRA-202ENST00000527817 LDHAL6AQ6ZMR3 332 aa15.66■□□□□ 0.1
SRPRA-202ENST00000527817 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.66■□□□□ 0.1
SRPRA-202ENST00000527817 TTF2Q9UNY4 1162 aaKnown RBP15.66■□□□□ 0.1
SRPRA-202ENST00000527817 CSADQ9Y600 493 aa15.66■□□□□ 0.1
SRPRA-202ENST00000527817 PLIN1O60240 522 aa15.65■□□□□ 0.1
SRPRA-202ENST00000527817 TNNI2P48788 182 aa15.65■□□□□ 0.1
SRPRA-202ENST00000527817 PRMT2P55345 433 aa15.65■□□□□ 0.1
SRPRA-202ENST00000527817 UBE4AQ14139 1066 aa15.65■□□□□ 0.1
SRPRA-202ENST00000527817 LMBR1LQ6UX01 489 aa15.65■□□□□ 0.1
SRPRA-202ENST00000527817 TCP10L2B9ZVM9 353 aa15.64■□□□□ 0.09
SRPRA-202ENST00000527817 CETPP11597 493 aa15.64■□□□□ 0.09
SRPRA-202ENST00000527817 HIBADHP31937 336 aaKnown RBP15.64■□□□□ 0.09
SRPRA-202ENST00000527817 LACTBP83111 547 aaPredicted RBP15.64■□□□□ 0.09
SRPRA-202ENST00000527817 CCDC57Q2TAC2 916 aa15.64■□□□□ 0.09
SRPRA-202ENST00000527817 CDAN1Q8IWY9 1227 aa15.64■□□□□ 0.09
SRPRA-202ENST00000527817 FAM84BQ96KN1 310 aaPredicted RBP15.64■□□□□ 0.09
SRPRA-202ENST00000527817 TMEM39BQ9GZU3 492 aa15.64■□□□□ 0.09
SRPRA-202ENST00000527817 CHMP3Q9Y3E7 222 aa15.64■□□□□ 0.09
SRPRA-202ENST00000527817 SPDYE5A6NIY4 337 aa15.63■□□□□ 0.09
SRPRA-202ENST00000527817 CRKP46108 304 aa15.63■□□□□ 0.09
SRPRA-202ENST00000527817 HDLBPQ00341 1268 aaKnown RBP15.63■□□□□ 0.09
SRPRA-202ENST00000527817 BEND3Q5T5X7 828 aa15.63■□□□□ 0.09
SRPRA-202ENST00000527817 ERO1BQ86YB8 467 aa15.63■□□□□ 0.09
SRPRA-202ENST00000527817 WWC1Q8IX03 1113 aa15.63■□□□□ 0.09
SRPRA-202ENST00000527817 SH3TC2Q8TF17 1288 aa15.63■□□□□ 0.09
SRPRA-202ENST00000527817 ZNF594Q96JF6 807 aaPredicted RBP15.63■□□□□ 0.09
SRPRA-202ENST00000527817 CNNM1Q9NRU3 951 aa15.63■□□□□ 0.09
SRPRA-202ENST00000527817 CACNA1FO60840 1977 aa15.63■□□□□ 0.09
SRPRA-202ENST00000527817 RANBP2P49792 3224 aaKnown RBP15.63■□□□□ 0.09
SRPRA-202ENST00000527817 IL16Q14005 1332 aa15.63■□□□□ 0.09
SRPRA-202ENST00000527817 OTOFQ9HC10 1997 aa15.62■□□□□ 0.09
SRPRA-202ENST00000527817 BTBD19C9JJ37 291 aa15.62■□□□□ 0.09
SRPRA-202ENST00000527817 EPHA10Q5JZY3 1008 aa15.62■□□□□ 0.09
SRPRA-202ENST00000527817 MRIQ9BWK5 157 aa15.62■□□□□ 0.09
SRPRA-202ENST00000527817 ARHGAP39Q9C0H5 1083 aa15.62■□□□□ 0.09
SRPRA-202ENST00000527817 VAMP4O75379 141 aa15.61■□□□□ 0.09
SRPRA-202ENST00000527817 MYCP01106 439 aaPredicted RBP15.61■□□□□ 0.09
SRPRA-202ENST00000527817 GYG1P46976 350 aa15.61■□□□□ 0.09
SRPRA-202ENST00000527817 SNAPC2Q13487 334 aa15.61■□□□□ 0.09
SRPRA-202ENST00000527817 TAF7LQ5H9L4 462 aa15.61■□□□□ 0.09
SRPRA-202ENST00000527817 SNCAIPQ9Y6H5 919 aa15.61■□□□□ 0.09
SRPRA-202ENST00000527817 IRF6O14896 467 aa15.6■□□□□ 0.09
SRPRA-202ENST00000527817 PPIL2Q13356 520 aa15.6■□□□□ 0.09
SRPRA-202ENST00000527817 NCBP3Q53F19 620 aaKnown RBP15.6■□□□□ 0.09
SRPRA-202ENST00000527817 FKBP1CQ5VVH2 108 aa15.6■□□□□ 0.09
SRPRA-202ENST00000527817 C17orf99Q6UX52 265 aa15.6■□□□□ 0.09
SRPRA-202ENST00000527817 FBXO33Q7Z6M2 555 aa15.6■□□□□ 0.09
SRPRA-202ENST00000527817 NKX2-3Q8TAU0 364 aa15.6■□□□□ 0.09
SRPRA-202ENST00000527817 HOOK2Q96ED9 719 aa15.6■□□□□ 0.09
SRPRA-202ENST00000527817 A0A1B0GUL6 1792 aa15.59■□□□□ 0.09
SRPRA-202ENST00000527817 GRM8O00222 908 aa15.59■□□□□ 0.09
SRPRA-202ENST00000527817 HOXD10P28358 340 aa15.59■□□□□ 0.09
SRPRA-202ENST00000527817 MTFR1Q15390 333 aa15.59■□□□□ 0.09
SRPRA-202ENST00000527817 CHRDL2Q6WN34 429 aa15.59■□□□□ 0.09
SRPRA-202ENST00000527817 FAM83AQ86UY5 434 aa15.59■□□□□ 0.09
SRPRA-202ENST00000527817 TBC1D22AQ8WUA7 517 aa15.59■□□□□ 0.09
SRPRA-202ENST00000527817 DPF3Q92784 378 aa15.59■□□□□ 0.09
SRPRA-202ENST00000527817 SRRDQ9UH36 339 aa15.59■□□□□ 0.09
SRPRA-202ENST00000527817 F6X3S4 739 aa15.58■□□□□ 0.08
SRPRA-202ENST00000527817 PPATQ06203 517 aa15.58■□□□□ 0.08
SRPRA-202ENST00000527817 GRIK5Q16478 980 aa15.58■□□□□ 0.08
SRPRA-202ENST00000527817 ZKSCAN4Q969J2 545 aaPredicted RBP15.58■□□□□ 0.08
SRPRA-202ENST00000527817 SHISA4Q96DD7 197 aa15.58■□□□□ 0.08
SRPRA-202ENST00000527817 WRNIP1Q96S55 665 aa15.58■□□□□ 0.08
SRPRA-202ENST00000527817 RBM27Q9P2N5 1060 aaKnown RBP15.58■□□□□ 0.08
SRPRA-202ENST00000527817 RIPOR2Q9Y4F9 1068 aa15.58■□□□□ 0.08
SRPRA-202ENST00000527817 A0A0C4DFX4 3053 aa15.57■□□□□ 0.08
SRPRA-202ENST00000527817 GJB1P08034 283 aa15.57■□□□□ 0.08
SRPRA-202ENST00000527817 GRK4P32298 578 aa15.57■□□□□ 0.08
SRPRA-202ENST00000527817 PSMC4P43686 418 aa15.57■□□□□ 0.08
SRPRA-202ENST00000527817 UBE2Q1Q7Z7E8 422 aa15.57■□□□□ 0.08
SRPRA-202ENST00000527817 TEKT1Q969V4 418 aa15.57■□□□□ 0.08
SRPRA-202ENST00000527817 TRIM47Q96LD4 638 aa15.57■□□□□ 0.08
SRPRA-202ENST00000527817 ZDHHC15Q96MV8 337 aa15.57■□□□□ 0.08
SRPRA-202ENST00000527817 PUS3Q9BZE2 481 aaKnown RBP15.57■□□□□ 0.08
SRPRA-202ENST00000527817 C9orf78Q9NZ63 289 aaPredicted RBP15.57■□□□□ 0.08
SRPRA-202ENST00000527817 CTGFP29279 349 aa15.56■□□□□ 0.08
SRPRA-202ENST00000527817 GJA8P48165 433 aa15.56■□□□□ 0.08
SRPRA-202ENST00000527817 DCAF15Q66K64 600 aa15.56■□□□□ 0.08
SRPRA-202ENST00000527817 ANKRD23Q86SG2 305 aa15.56■□□□□ 0.08
SRPRA-202ENST00000527817 VPS37DQ86XT2 251 aa15.56■□□□□ 0.08
SRPRA-202ENST00000527817 HTATIP2Q9BUP3 242 aa15.56■□□□□ 0.08
SRPRA-202ENST00000527817 PRO3102Q9H379 93 aa15.56■□□□□ 0.08
SRPRA-202ENST00000527817 TMOD2Q9NZR1 351 aa15.56■□□□□ 0.08
SRPRA-202ENST00000527817 SUGT1Q9Y2Z0 365 aa15.56■□□□□ 0.08
SRPRA-202ENST00000527817 MROH5Q6ZUA9 1318 aa15.56■□□□□ 0.08
SRPRA-202ENST00000527817 ARAP2Q8WZ64 1704 aa15.56■□□□□ 0.08
SRPRA-202ENST00000527817 ALDH1L1O75891 902 aa15.55■□□□□ 0.08
SRPRA-202ENST00000527817 OSBPP22059 807 aa15.55■□□□□ 0.08
SRPRA-202ENST00000527817 CACNB3P54284 484 aa15.55■□□□□ 0.08
SRPRA-202ENST00000527817 APOBEC3HQ6NTF7 200 aaKnown RBP15.55■□□□□ 0.08
SRPRA-202ENST00000527817 HHIPL2Q6UWX4 724 aa15.55■□□□□ 0.08
SRPRA-202ENST00000527817 RAET1EQ8TD07 263 aa15.55■□□□□ 0.08
SRPRA-202ENST00000527817 ZNF341Q9BYN7 854 aa15.55■□□□□ 0.08
SRPRA-202ENST00000527817 CPA4Q9UI42 421 aa15.55■□□□□ 0.08
SRPRA-202ENST00000527817 FANCIQ9NVI1 1328 aa15.54■□□□□ 0.08
SRPRA-202ENST00000527817 FRAT2O75474 233 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms