RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 TNNI2P48788 182 aa28.03■■■□□ 2.08
TRAPPC4-208ENST00000527680 BCAMP50895 628 aa28.03■■■□□ 2.08
TRAPPC4-208ENST00000527680 IFIT1P09914 478 aaKnown RBP28.02■■■□□ 2.08
TRAPPC4-208ENST00000527680 ANKRD13AQ8IZ07 590 aa28.02■■■□□ 2.08
TRAPPC4-208ENST00000527680 GRIK5Q16478 980 aa28.01■■■□□ 2.07
TRAPPC4-208ENST00000527680 NOM1Q5C9Z4 860 aaKnown RBP28.01■■■□□ 2.07
TRAPPC4-208ENST00000527680 IFNL1Q8IU54 200 aa28.01■■■□□ 2.07
TRAPPC4-208ENST00000527680 VGLL2Q8N8G2 317 aa28.01■■■□□ 2.07
TRAPPC4-208ENST00000527680 R3HDMLQ9H3Y0 253 aa28.01■■■□□ 2.07
TRAPPC4-208ENST00000527680 SSC5DA1L4H1 1573 aa28.01■■■□□ 2.07
TRAPPC4-208ENST00000527680 PUM3Q15397 648 aaKnown RBP28■■■□□ 2.07
TRAPPC4-208ENST00000527680 HPS5Q9UPZ3 1129 aa28■■■□□ 2.07
TRAPPC4-208ENST00000527680 OTUD7BQ6GQQ9 843 aa27.99■■■□□ 2.07
TRAPPC4-208ENST00000527680 TEKT1Q969V4 418 aa27.99■■■□□ 2.07
TRAPPC4-208ENST00000527680 CFHR5Q9BXR6 569 aa27.99■■■□□ 2.07
TRAPPC4-208ENST00000527680 EYA2O00167 538 aa27.98■■■□□ 2.07
TRAPPC4-208ENST00000527680 UBTFL1P0CB47 393 aaPredicted RBP27.98■■■□□ 2.07
TRAPPC4-208ENST00000527680 HDLBPQ00341 1268 aaKnown RBP27.98■■■□□ 2.07
TRAPPC4-208ENST00000527680 TMEM39BQ9GZU3 492 aa27.98■■■□□ 2.07
TRAPPC4-208ENST00000527680 NOB1Q9ULX3 412 aaKnown RBP27.98■■■□□ 2.07
TRAPPC4-208ENST00000527680 SLC5A1P13866 664 aa27.97■■■□□ 2.07
TRAPPC4-208ENST00000527680 ELP3Q9H9T3 547 aa27.97■■■□□ 2.07
TRAPPC4-208ENST00000527680 TMOD2Q9NZR1 351 aa27.96■■■□□ 2.07
TRAPPC4-208ENST00000527680 IGF2BP3O00425 579 aaKnown RBP eCLIP27.95■■■□□ 2.06
TRAPPC4-208ENST00000527680 FGFR2P21802 821 aa27.95■■■□□ 2.06
TRAPPC4-208ENST00000527680 RFX5P48382 616 aaPredicted RBP27.95■■■□□ 2.06
TRAPPC4-208ENST00000527680 TRMT2AQ8IZ69 625 aaKnown RBP27.95■■■□□ 2.06
TRAPPC4-208ENST00000527680 LPIN2Q92539 896 aa27.95■■■□□ 2.06
TRAPPC4-208ENST00000527680 TEPSINQ96N21 525 aa27.95■■■□□ 2.06
TRAPPC4-208ENST00000527680 SIL1Q9H173 461 aa27.95■■■□□ 2.06
TRAPPC4-208ENST00000527680 GJA5P36382 358 aa27.94■■■□□ 2.06
TRAPPC4-208ENST00000527680 CACNB3P54284 484 aa27.94■■■□□ 2.06
TRAPPC4-208ENST00000527680 FBXO46Q6PJ61 603 aaPredicted RBP27.94■■■□□ 2.06
TRAPPC4-208ENST00000527680 CDAN1Q8IWY9 1227 aa27.94■■■□□ 2.06
TRAPPC4-208ENST00000527680 OPTNQ96CV9 577 aa27.94■■■□□ 2.06
TRAPPC4-208ENST00000527680 MRIQ9BWK5 157 aa27.94■■■□□ 2.06
TRAPPC4-208ENST00000527680 HDAC5Q9UQL6 1122 aa27.94■■■□□ 2.06
TRAPPC4-208ENST00000527680 MAST3O60307 1309 aa27.93■■■□□ 2.06
TRAPPC4-208ENST00000527680 CT47B1P0C2W7 299 aaPredicted RBP27.93■■■□□ 2.06
TRAPPC4-208ENST00000527680 MAP3K9P80192 1104 aa27.93■■■□□ 2.06
TRAPPC4-208ENST00000527680 API5Q9BZZ5 524 aaKnown RBP27.93■■■□□ 2.06
TRAPPC4-208ENST00000527680 CEP126Q9P2H0 1117 aa27.93■■■□□ 2.06
TRAPPC4-208ENST00000527680 SUGT1Q9Y2Z0 365 aa27.93■■■□□ 2.06
TRAPPC4-208ENST00000527680 CSADQ9Y600 493 aa27.93■■■□□ 2.06
TRAPPC4-208ENST00000527680 KIF16BQ96L93 1317 aa27.92■■■□□ 2.06
TRAPPC4-208ENST00000527680 WDR66Q8TBY9 1149 aa27.92■■■□□ 2.06
TRAPPC4-208ENST00000527680 ZDHHC15Q96MV8 337 aa27.92■■■□□ 2.06
TRAPPC4-208ENST00000527680 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.91■■■□□ 2.06
TRAPPC4-208ENST00000527680 ARAP2Q8WZ64 1704 aa27.91■■■□□ 2.06
TRAPPC4-208ENST00000527680 ATG9AQ7Z3C6 839 aa27.9■■■□□ 2.06
TRAPPC4-208ENST00000527680 TRIM17Q9Y577 477 aa27.9■■■□□ 2.06
TRAPPC4-208ENST00000527680 APOBEC3HQ6NTF7 200 aaKnown RBP27.89■■■□□ 2.06
TRAPPC4-208ENST00000527680 HHIPL2Q6UWX4 724 aa27.89■■■□□ 2.06
TRAPPC4-208ENST00000527680 GNL3LQ9NVN8 582 aaKnown RBP27.89■■■□□ 2.06
TRAPPC4-208ENST00000527680 LRRFIP2Q9Y608 721 aaKnown RBP27.89■■■□□ 2.06
TRAPPC4-208ENST00000527680 CRHR2Q13324 411 aa27.88■■■□□ 2.05
TRAPPC4-208ENST00000527680 VGLL4Q14135 290 aa27.88■■■□□ 2.05
TRAPPC4-208ENST00000527680 ATP2B3Q16720 1220 aa27.88■■■□□ 2.05
TRAPPC4-208ENST00000527680 CNKSR2Q8WXI2 1034 aa27.88■■■□□ 2.05
TRAPPC4-208ENST00000527680 HOOK2Q96ED9 719 aa27.88■■■□□ 2.05
TRAPPC4-208ENST00000527680 PTPN18Q99952 460 aa27.88■■■□□ 2.05
TRAPPC4-208ENST00000527680 FBXO3Q9UK99 471 aa27.88■■■□□ 2.05
TRAPPC4-208ENST00000527680 CIAO1O76071 339 aa27.87■■■□□ 2.05
TRAPPC4-208ENST00000527680 FAM83AQ86UY5 434 aa27.87■■■□□ 2.05
TRAPPC4-208ENST00000527680 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.87■■■□□ 2.05
TRAPPC4-208ENST00000527680 ERO1AQ96HE7 468 aa27.87■■■□□ 2.05
TRAPPC4-208ENST00000527680 TESPA1A2RU30 521 aaPredicted RBP27.86■■■□□ 2.05
TRAPPC4-208ENST00000527680 CCER2I3L3R5 266 aa27.86■■■□□ 2.05
TRAPPC4-208ENST00000527680 GTF2A2P52657 109 aa27.86■■■□□ 2.05
TRAPPC4-208ENST00000527680 FKBP1CQ5VVH2 108 aa27.86■■■□□ 2.05
TRAPPC4-208ENST00000527680 OTUD5Q96G74 571 aa27.86■■■□□ 2.05
TRAPPC4-208ENST00000527680 CCL15-CCL14A0A0B4J2E2 113 aa27.85■■■□□ 2.05
TRAPPC4-208ENST00000527680 IL15P40933 162 aaPredicted RBP27.85■■■□□ 2.05
TRAPPC4-208ENST00000527680 CCL15Q16663 113 aa27.85■■■□□ 2.05
TRAPPC4-208ENST00000527680 MS4A4AQ96JQ5 239 aa27.85■■■□□ 2.05
TRAPPC4-208ENST00000527680 PA2G4Q9UQ80 394 aaKnown RBP27.85■■■□□ 2.05
TRAPPC4-208ENST00000527680 OTOP1Q7RTM1 612 aa27.84■■■□□ 2.05
TRAPPC4-208ENST00000527680 CD99L2Q8TCZ2 262 aa27.84■■■□□ 2.05
TRAPPC4-208ENST00000527680 WRNIP1Q96S55 665 aa27.84■■■□□ 2.05
TRAPPC4-208ENST00000527680 MYH13Q9UKX3 1938 aa27.83■■■□□ 2.05
TRAPPC4-208ENST00000527680 LDHBP07195 334 aaKnown RBP27.83■■■□□ 2.05
TRAPPC4-208ENST00000527680 RARSP54136 660 aaKnown RBP27.83■■■□□ 2.05
TRAPPC4-208ENST00000527680 SP3Q02447 781 aa27.83■■■□□ 2.05
TRAPPC4-208ENST00000527680 DCAF15Q66K64 600 aa27.83■■■□□ 2.05
TRAPPC4-208ENST00000527680 MEIS3Q99687 375 aa27.83■■■□□ 2.05
TRAPPC4-208ENST00000527680 OTOFQ9HC10 1997 aa27.82■■■□□ 2.04
TRAPPC4-208ENST00000527680 TAF1CQ15572 869 aaPredicted RBP27.82■■■□□ 2.04
TRAPPC4-208ENST00000527680 MIGA2Q7L4E1 593 aa27.82■■■□□ 2.04
TRAPPC4-208ENST00000527680 BRI3BPQ8WY22 251 aa27.82■■■□□ 2.04
TRAPPC4-208ENST00000527680 ZKSCAN4Q969J2 545 aaPredicted RBP27.82■■■□□ 2.04
TRAPPC4-208ENST00000527680 ZFYVE28Q9HCC9 887 aa27.82■■■□□ 2.04
TRAPPC4-208ENST00000527680 DENND2AQ9ULE3 1009 aa27.82■■■□□ 2.04
TRAPPC4-208ENST00000527680 WDHD1O75717 1129 aaPredicted RBP27.81■■■□□ 2.04
TRAPPC4-208ENST00000527680 TCP10Q12799 353 aa27.81■■■□□ 2.04
TRAPPC4-208ENST00000527680 DIXDC1Q155Q3 683 aa27.81■■■□□ 2.04
TRAPPC4-208ENST00000527680 EFCC1Q9HA90 598 aa27.81■■■□□ 2.04
TRAPPC4-208ENST00000527680 AK9Q5TCS8 1911 aa27.8■■■□□ 2.04
TRAPPC4-208ENST00000527680 PRDX5P30044 214 aa27.8■■■□□ 2.04
TRAPPC4-208ENST00000527680 ERO1BQ86YB8 467 aa27.8■■■□□ 2.04
TRAPPC4-208ENST00000527680 DAGLAQ9Y4D2 1042 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms