RNA–Protein interactions for RNA: ENST00000527317.2

AP001993.1-201, humanhuman

TSL 2 BASIC

Gene AP001993.1, Length 2,337 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001993.1-201ENST00000527317 PABPC4Q13310 644 aaKnown RBP eCLIP12.5□□□□□ -0.41
AP001993.1-201ENST00000527317 TMED1Q13445 227 aa12.5□□□□□ -0.41
AP001993.1-201ENST00000527317 GALNT17Q6IS24 598 aa12.5□□□□□ -0.41
AP001993.1-201ENST00000527317 CCDC80Q76M96 950 aa12.5□□□□□ -0.41
AP001993.1-201ENST00000527317 CCDC150Q8NCX0 1101 aa12.5□□□□□ -0.41
AP001993.1-201ENST00000527317 RASSF8Q8NHQ8 419 aa12.5□□□□□ -0.41
AP001993.1-201ENST00000527317 EBF2Q9HAK2 575 aa12.5□□□□□ -0.41
AP001993.1-201ENST00000527317 IMPACTQ9P2X3 320 aa12.5□□□□□ -0.41
AP001993.1-201ENST00000527317 A6NHS1 94 aa12.5□□□□□ -0.41
AP001993.1-201ENST00000527317 F13A1P00488 732 aa12.5□□□□□ -0.41
AP001993.1-201ENST00000527317 CSB-PGBD3P0DP91 1061 aa12.5□□□□□ -0.41
AP001993.1-201ENST00000527317 XBP1P17861 261 aa12.5□□□□□ -0.41
AP001993.1-201ENST00000527317 ATP5JP18859 108 aa12.5□□□□□ -0.41
AP001993.1-201ENST00000527317 KIF4BQ2VIQ3 1234 aa12.5□□□□□ -0.41
AP001993.1-201ENST00000527317 ARMCX5Q6P1M9 558 aa12.5□□□□□ -0.41
AP001993.1-201ENST00000527317 SYNE3Q6ZMZ3 975 aa12.5□□□□□ -0.41
AP001993.1-201ENST00000527317 NEK9Q8TD19 979 aa12.5□□□□□ -0.41
AP001993.1-201ENST00000527317 DTNBP1Q96EV8 351 aa12.5□□□□□ -0.41
AP001993.1-201ENST00000527317 ATP6V1DQ9Y5K8 247 aa12.5□□□□□ -0.41
AP001993.1-201ENST00000527317 DISP3Q9P2K9 1392 aa12.49□□□□□ -0.41
AP001993.1-201ENST00000527317 WDR62O43379 1518 aa12.49□□□□□ -0.41
AP001993.1-201ENST00000527317 EHBP1L1Q8N3D4 1523 aa12.49□□□□□ -0.41
AP001993.1-201ENST00000527317 MBD4O95243 580 aa12.49□□□□□ -0.41
AP001993.1-201ENST00000527317 NOL8Q76FK4 1167 aaKnown RBP12.49□□□□□ -0.41
AP001993.1-201ENST00000527317 RMDN2Q96LZ7 410 aa12.49□□□□□ -0.41
AP001993.1-201ENST00000527317 UBE2OQ9C0C9 1292 aaKnown RBP12.49□□□□□ -0.41
AP001993.1-201ENST00000527317 TRPV5Q9NQA5 729 aa12.49□□□□□ -0.41
AP001993.1-201ENST00000527317 SMARCA4P51532 1647 aa12.49□□□□□ -0.41
AP001993.1-201ENST00000527317 ARHGEF12Q9NZN5 1544 aa12.49□□□□□ -0.41
AP001993.1-201ENST00000527317 ZNF202O95125 648 aa12.49□□□□□ -0.41
AP001993.1-201ENST00000527317 SSBP05455 408 aaKnown RBP eCLIP12.49□□□□□ -0.41
AP001993.1-201ENST00000527317 U2AF1L5P0DN76 240 aaPredicted RBP12.49□□□□□ -0.41
AP001993.1-201ENST00000527317 CDC25CP30307 473 aa12.49□□□□□ -0.41
AP001993.1-201ENST00000527317 SESN3P58005 492 aa12.49□□□□□ -0.41
AP001993.1-201ENST00000527317 U2AF1Q01081 240 aaKnown RBP eCLIP12.49□□□□□ -0.41
AP001993.1-201ENST00000527317 DPY19L2Q6NUT2 758 aa12.49□□□□□ -0.41
AP001993.1-201ENST00000527317 AFAP1Q8N556 730 aa12.49□□□□□ -0.41
AP001993.1-201ENST00000527317 VIPAS39Q9H9C1 493 aa12.49□□□□□ -0.41
AP001993.1-201ENST00000527317 HOOK1Q9UJC3 728 aaKnown RBP12.49□□□□□ -0.41
AP001993.1-201ENST00000527317 IQSEC3Q9UPP2 1182 aaPredicted RBP12.49□□□□□ -0.41
AP001993.1-201ENST00000527317 RGS12O14924 1447 aa12.48□□□□□ -0.41
AP001993.1-201ENST00000527317 SMIM24O75264 130 aa12.48□□□□□ -0.41
AP001993.1-201ENST00000527317 IFIT2P09913 472 aaKnown RBP12.48□□□□□ -0.41
AP001993.1-201ENST00000527317 DNM1Q05193 864 aaKnown RBP12.48□□□□□ -0.41
AP001993.1-201ENST00000527317 PPFIA1Q13136 1202 aa12.48□□□□□ -0.41
AP001993.1-201ENST00000527317 CCDC57Q2TAC2 916 aa12.48□□□□□ -0.41
AP001993.1-201ENST00000527317 KBTBD12Q3ZCT8 623 aa12.48□□□□□ -0.41
AP001993.1-201ENST00000527317 PPP1R15BQ5SWA1 713 aa12.48□□□□□ -0.41
AP001993.1-201ENST00000527317 FAM76AQ8TAV0 307 aa12.48□□□□□ -0.41
AP001993.1-201ENST00000527317 CORO1BQ9BR76 489 aa12.48□□□□□ -0.41
AP001993.1-201ENST00000527317 PAGR1Q9BTK6 254 aa12.48□□□□□ -0.41
AP001993.1-201ENST00000527317 NUP58Q9BVL2 599 aa12.48□□□□□ -0.41
AP001993.1-201ENST00000527317 CAPS2Q9BXY5 557 aa12.48□□□□□ -0.41
AP001993.1-201ENST00000527317 PHF24Q9UPV7 400 aa12.48□□□□□ -0.41
AP001993.1-201ENST00000527317 CARMIL1Q5VZK9 1371 aa12.48□□□□□ -0.41
AP001993.1-201ENST00000527317 TMEM221A6NGB7 291 aa12.48□□□□□ -0.41
AP001993.1-201ENST00000527317 MGRN1O60291 552 aa12.48□□□□□ -0.41
AP001993.1-201ENST00000527317 ATP4AP20648 1035 aa12.48□□□□□ -0.41
AP001993.1-201ENST00000527317 CHMP4BP1P59074 171 aa12.48□□□□□ -0.41
AP001993.1-201ENST00000527317 BLMHQ13867 455 aa12.48□□□□□ -0.41
AP001993.1-201ENST00000527317 TMEM57Q8N5G2 664 aa12.48□□□□□ -0.41
AP001993.1-201ENST00000527317 SMYD1Q8NB12 490 aa12.48□□□□□ -0.41
AP001993.1-201ENST00000527317 POLR3CQ9BUI4 534 aaPredicted RBP12.48□□□□□ -0.41
AP001993.1-201ENST00000527317 INCENPQ9NQS7 918 aa12.48□□□□□ -0.41
AP001993.1-201ENST00000527317 THRAP3Q9Y2W1 955 aaKnown RBP12.48□□□□□ -0.41
AP001993.1-201ENST00000527317 PPIP5K1Q6PFW1 1433 aa12.47□□□□□ -0.41
AP001993.1-201ENST00000527317 BECN2A8MW95 431 aa12.47□□□□□ -0.41
AP001993.1-201ENST00000527317 KIF3BO15066 747 aa12.47□□□□□ -0.41
AP001993.1-201ENST00000527317 STX6O43752 255 aa12.47□□□□□ -0.41
AP001993.1-201ENST00000527317 CREB3O43889 395 aa12.47□□□□□ -0.41
AP001993.1-201ENST00000527317 KRT38O76015 456 aa12.47□□□□□ -0.41
AP001993.1-201ENST00000527317 VIL1P09327 827 aaKnown RBP12.47□□□□□ -0.41
AP001993.1-201ENST00000527317 SFPQP23246 707 aaKnown RBP eCLIP12.47□□□□□ -0.41
AP001993.1-201ENST00000527317 CA8P35219 290 aa12.47□□□□□ -0.41
AP001993.1-201ENST00000527317 MYO1EQ12965 1108 aa12.47□□□□□ -0.41
AP001993.1-201ENST00000527317 SF3B2Q13435 895 aaKnown RBP12.47□□□□□ -0.41
AP001993.1-201ENST00000527317 DCTN1Q14203 1278 aa12.47□□□□□ -0.41
AP001993.1-201ENST00000527317 TTC22Q5TAA0 569 aa12.47□□□□□ -0.41
AP001993.1-201ENST00000527317 NUGGCQ68CJ6 796 aa12.47□□□□□ -0.41
AP001993.1-201ENST00000527317 SAMD3Q8N6K7 520 aa12.47□□□□□ -0.41
AP001993.1-201ENST00000527317 WDR24Q96S15 920 aa12.47□□□□□ -0.41
AP001993.1-201ENST00000527317 WDR37Q9Y2I8 494 aa12.47□□□□□ -0.41
AP001993.1-201ENST00000527317 C15orf41Q9Y2V0 281 aa12.47□□□□□ -0.41
AP001993.1-201ENST00000527317 CADPSQ9ULU8 1353 aa12.47□□□□□ -0.41
AP001993.1-201ENST00000527317 SUPT6HQ7KZ85 1726 aaKnown RBP12.47□□□□□ -0.41
AP001993.1-201ENST00000527317 NDUFAB1O14561 156 aa12.46□□□□□ -0.41
AP001993.1-201ENST00000527317 MYO1BO43795 1136 aa12.46□□□□□ -0.41
AP001993.1-201ENST00000527317 VSNL1P62760 191 aa12.46□□□□□ -0.41
AP001993.1-201ENST00000527317 ADCY1Q08828 1119 aa12.46□□□□□ -0.41
AP001993.1-201ENST00000527317 SLMAPQ14BN4 828 aa12.46□□□□□ -0.41
AP001993.1-201ENST00000527317 ATF7IPQ6VMQ6 1270 aa12.46□□□□□ -0.41
AP001993.1-201ENST00000527317 HDAC7Q8WUI4 952 aa12.46□□□□□ -0.41
AP001993.1-201ENST00000527317 BRD8Q9H0E9 1235 aa12.46□□□□□ -0.41
AP001993.1-201ENST00000527317 DACT1Q9NYF0 836 aa12.46□□□□□ -0.41
AP001993.1-201ENST00000527317 CHMP3Q9Y3E7 222 aa12.46□□□□□ -0.41
AP001993.1-201ENST00000527317 CFTRP13569 1480 aa12.46□□□□□ -0.41
AP001993.1-201ENST00000527317 WDHD1O75717 1129 aaPredicted RBP12.46□□□□□ -0.41
AP001993.1-201ENST00000527317 GNGT1P63211 74 aa12.46□□□□□ -0.41
AP001993.1-201ENST00000527317 IFFO1Q0D2I5 559 aa12.46□□□□□ -0.41
AP001993.1-201ENST00000527317 DRP2Q13474 957 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms