RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 TRDNQ13061 729 aa19.15■□□□□ 0.66
SNRNP35-204ENST00000527158 STK3Q13188 491 aa19.15■□□□□ 0.66
SNRNP35-204ENST00000527158 ZMYM6O95789 1325 aa19.15■□□□□ 0.66
SNRNP35-204ENST00000527158 STX6O43752 255 aa19.15■□□□□ 0.66
SNRNP35-204ENST00000527158 SYT1P21579 422 aa19.15■□□□□ 0.66
SNRNP35-204ENST00000527158 HOXA10P31260 410 aaPredicted RBP19.15■□□□□ 0.66
SNRNP35-204ENST00000527158 MCM5P33992 734 aa19.15■□□□□ 0.66
SNRNP35-204ENST00000527158 IFNL3Q8IZI9 196 aa19.15■□□□□ 0.66
SNRNP35-204ENST00000527158 AGXT2Q9BYV1 514 aa19.15■□□□□ 0.66
SNRNP35-204ENST00000527158 NAPBQ9H115 298 aa19.15■□□□□ 0.66
SNRNP35-204ENST00000527158 RGS17Q9UGC6 210 aaPredicted RBP19.15■□□□□ 0.66
SNRNP35-204ENST00000527158 COL1A1P02452 1464 aaPredicted RBP19.14■□□□□ 0.66
SNRNP35-204ENST00000527158 ZBTB22O15209 634 aa19.14■□□□□ 0.65
SNRNP35-204ENST00000527158 FBXL16Q8N461 479 aa19.14■□□□□ 0.65
SNRNP35-204ENST00000527158 KLRG2A4D1S0 409 aaPredicted RBP19.13■□□□□ 0.65
SNRNP35-204ENST00000527158 GTF3C6Q969F1 213 aa19.13■□□□□ 0.65
SNRNP35-204ENST00000527158 CRAMP1Q96RY5 1269 aa19.13■□□□□ 0.65
SNRNP35-204ENST00000527158 SLC4A4Q9Y6R1 1079 aa19.13■□□□□ 0.65
SNRNP35-204ENST00000527158 POTEAQ6S8J7 498 aa19.13■□□□□ 0.65
SNRNP35-204ENST00000527158 CHST3Q7LGC8 479 aa19.13■□□□□ 0.65
SNRNP35-204ENST00000527158 LCORLQ8N3X6 602 aa19.13■□□□□ 0.65
SNRNP35-204ENST00000527158 MIGA1Q8NAN2 632 aa19.13■□□□□ 0.65
SNRNP35-204ENST00000527158 BRIP1Q9BX63 1249 aa19.13■□□□□ 0.65
SNRNP35-204ENST00000527158 MAGEB6P1A0A0J9YX57 407 aa19.12■□□□□ 0.65
SNRNP35-204ENST00000527158 ZSCAN22P10073 491 aaPredicted RBP19.12■□□□□ 0.65
SNRNP35-204ENST00000527158 PDCP20941 246 aa19.12■□□□□ 0.65
SNRNP35-204ENST00000527158 NAA16Q6N069 864 aaPredicted RBP19.12■□□□□ 0.65
SNRNP35-204ENST00000527158 TXNRD3Q86VQ6 643 aa19.12■□□□□ 0.65
SNRNP35-204ENST00000527158 CHMP4CQ96CF2 233 aa19.12■□□□□ 0.65
SNRNP35-204ENST00000527158 NSFL1CQ9UNZ2 370 aaKnown RBP19.12■□□□□ 0.65
SNRNP35-204ENST00000527158 IRS2Q9Y4H2 1338 aa19.12■□□□□ 0.65
SNRNP35-204ENST00000527158 GSG1L2A8MUP6 293 aa19.12■□□□□ 0.65
SNRNP35-204ENST00000527158 ATP2B4P23634 1241 aa19.12■□□□□ 0.65
SNRNP35-204ENST00000527158 CHAF1AQ13111 956 aaPredicted RBP19.12■□□□□ 0.65
SNRNP35-204ENST00000527158 TMC4Q7Z404 712 aa19.12■□□□□ 0.65
SNRNP35-204ENST00000527158 MB21D2Q8IYB1 491 aaPredicted RBP19.12■□□□□ 0.65
SNRNP35-204ENST00000527158 WDR19Q8NEZ3 1342 aa19.11■□□□□ 0.65
SNRNP35-204ENST00000527158 PRC1O43663 620 aa19.11■□□□□ 0.65
SNRNP35-204ENST00000527158 PFKFB2O60825 505 aa19.11■□□□□ 0.65
SNRNP35-204ENST00000527158 TDO2P48775 406 aa19.11■□□□□ 0.65
SNRNP35-204ENST00000527158 GPSM2P81274 684 aa19.11■□□□□ 0.65
SNRNP35-204ENST00000527158 APOBRQ0VD83 1088 aa19.11■□□□□ 0.65
SNRNP35-204ENST00000527158 KLHL40Q2TBA0 621 aa19.11■□□□□ 0.65
SNRNP35-204ENST00000527158 TMED8Q6PL24 325 aaPredicted RBP19.11■□□□□ 0.65
SNRNP35-204ENST00000527158 C15orf52Q6ZUT6 534 aaKnown RBP19.11■□□□□ 0.65
SNRNP35-204ENST00000527158 ZNF804AQ7Z570 1209 aa19.11■□□□□ 0.65
SNRNP35-204ENST00000527158 ZNF274Q96GC6 653 aaPredicted RBP19.11■□□□□ 0.65
SNRNP35-204ENST00000527158 ANO8Q9HCE9 1232 aaPredicted RBP19.11■□□□□ 0.65
SNRNP35-204ENST00000527158 PARP3Q9Y6F1 533 aa19.11■□□□□ 0.65
SNRNP35-204ENST00000527158 LAMA4Q16363 1823 aa19.11■□□□□ 0.65
SNRNP35-204ENST00000527158 LARP1BQ659C4 914 aaKnown RBP19.1■□□□□ 0.65
SNRNP35-204ENST00000527158 SPTY2D1Q68D10 685 aaPredicted RBP19.1■□□□□ 0.65
SNRNP35-204ENST00000527158 EPB41L4AQ9HCS5 686 aaPredicted RBP19.1■□□□□ 0.65
SNRNP35-204ENST00000527158 ATP6V1DQ9Y5K8 247 aa19.1■□□□□ 0.65
SNRNP35-204ENST00000527158 PRKAB2O43741 272 aa19.1■□□□□ 0.65
SNRNP35-204ENST00000527158 ADGRA1Q86SQ6 560 aa19.1■□□□□ 0.65
SNRNP35-204ENST00000527158 NBPF3Q9H094 633 aa19.1■□□□□ 0.65
SNRNP35-204ENST00000527158 GGA1Q9UJY5 639 aa19.1■□□□□ 0.65
SNRNP35-204ENST00000527158 CLCN1P35523 988 aa19.09■□□□□ 0.65
SNRNP35-204ENST00000527158 SCRN1Q12765 414 aa19.09■□□□□ 0.65
SNRNP35-204ENST00000527158 TBC1D10CQ8IV04 446 aa19.09■□□□□ 0.65
SNRNP35-204ENST00000527158 LLPHQ9BRT6 129 aaKnown RBP19.09■□□□□ 0.65
SNRNP35-204ENST00000527158 NAP1L2Q9ULW6 460 aaPredicted RBP19.09■□□□□ 0.65
SNRNP35-204ENST00000527158 IGSF3O75054 1194 aa19.09■□□□□ 0.65
SNRNP35-204ENST00000527158 UFL1O94874 794 aa19.09■□□□□ 0.65
SNRNP35-204ENST00000527158 MMP10P09238 476 aa19.09■□□□□ 0.65
SNRNP35-204ENST00000527158 WDR66Q8TBY9 1149 aa19.09■□□□□ 0.65
SNRNP35-204ENST00000527158 NSUN4Q96CB9 384 aaKnown RBP19.09■□□□□ 0.65
SNRNP35-204ENST00000527158 PRPF40AO75400 957 aaKnown RBP19.08■□□□□ 0.65
SNRNP35-204ENST00000527158 PDE6BP35913 854 aa19.08■□□□□ 0.65
SNRNP35-204ENST00000527158 EVCP57679 992 aa19.08■□□□□ 0.65
SNRNP35-204ENST00000527158 MECOMQ03112 1051 aa19.08■□□□□ 0.65
SNRNP35-204ENST00000527158 TDRD7Q8NHU6 1098 aaKnown RBP19.08■□□□□ 0.65
SNRNP35-204ENST00000527158 RRAGDQ9NQL2 400 aaPredicted RBP19.08■□□□□ 0.65
SNRNP35-204ENST00000527158 LMBRD1Q9NUN5 540 aa19.08■□□□□ 0.65
SNRNP35-204ENST00000527158 DDX49Q9Y6V7 483 aaKnown RBP19.08■□□□□ 0.65
SNRNP35-204ENST00000527158 F13A1P00488 732 aa19.08■□□□□ 0.64
SNRNP35-204ENST00000527158 PDIA3P30101 505 aaKnown RBP19.08■□□□□ 0.64
SNRNP35-204ENST00000527158 RIOK1Q9BRS2 568 aaKnown RBP19.08■□□□□ 0.64
SNRNP35-204ENST00000527158 CNNM2Q9H8M5 875 aa19.08■□□□□ 0.64
SNRNP35-204ENST00000527158 PODXL2Q9NZ53 605 aa19.08■□□□□ 0.64
SNRNP35-204ENST00000527158 MTMR6Q9Y217 621 aa19.08■□□□□ 0.64
SNRNP35-204ENST00000527158 TNS1Q9HBL0 1735 aaKnown RBP19.07■□□□□ 0.64
SNRNP35-204ENST00000527158 VPS37CA5D8V6 355 aaPredicted RBP19.07■□□□□ 0.64
SNRNP35-204ENST00000527158 PPEF1O14829 653 aaPredicted RBP19.07■□□□□ 0.64
SNRNP35-204ENST00000527158 DTNBO60941 627 aa19.07■□□□□ 0.64
SNRNP35-204ENST00000527158 ANTXR2P58335 489 aa19.07■□□□□ 0.64
SNRNP35-204ENST00000527158 SLC51AQ86UW1 340 aa19.07■□□□□ 0.64
SNRNP35-204ENST00000527158 PANK2Q9BZ23 570 aa19.07■□□□□ 0.64
SNRNP35-204ENST00000527158 NPR1P16066 1061 aa19.06■□□□□ 0.64
SNRNP35-204ENST00000527158 AKNAD1Q5T1N1 836 aa19.06■□□□□ 0.64
SNRNP35-204ENST00000527158 MFSD6Q6ZSS7 791 aa19.06■□□□□ 0.64
SNRNP35-204ENST00000527158 SP8Q8IXZ3 490 aa19.06■□□□□ 0.64
SNRNP35-204ENST00000527158 RGPD3A6NKT7 1758 aaPredicted RBP19.06■□□□□ 0.64
SNRNP35-204ENST00000527158 RGPD4Q7Z3J3 1758 aa19.06■□□□□ 0.64
SNRNP35-204ENST00000527158 SALL1Q9NSC2 1324 aa19.06■□□□□ 0.64
SNRNP35-204ENST00000527158 SRGNP10124 158 aa19.06■□□□□ 0.64
SNRNP35-204ENST00000527158 PRDX5P30044 214 aa19.06■□□□□ 0.64
SNRNP35-204ENST00000527158 DZIP1Q86YF9 867 aaKnown RBP19.06■□□□□ 0.64
SNRNP35-204ENST00000527158 ZNF384Q8TF68 577 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms