RNA–Protein interactions for RNA: ENST00000525964.6

NCAPD3-203, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 1 (best)

Gene NCAPD3, Length 5,025 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-203ENST00000525964 KIF5AQ12840 1032 aa16.38■□□□□ 0.21
NCAPD3-203ENST00000525964 CEP135Q66GS9 1140 aa16.38■□□□□ 0.21
NCAPD3-203ENST00000525964 PLEKHM2Q8IWE5 1019 aa16.38■□□□□ 0.21
NCAPD3-203ENST00000525964 ERICH4A6NGS2 130 aa16.38■□□□□ 0.21
NCAPD3-203ENST00000525964 ATP2A1O14983 1001 aa16.38■□□□□ 0.21
NCAPD3-203ENST00000525964 SKILP12757 684 aa16.38■□□□□ 0.21
NCAPD3-203ENST00000525964 HSP90AA4PQ58FG1 418 aa16.38■□□□□ 0.21
NCAPD3-203ENST00000525964 SUPT20HQ8NEM7 779 aa16.38■□□□□ 0.21
NCAPD3-203ENST00000525964 TMOD4Q9NZQ9 345 aa16.38■□□□□ 0.21
NCAPD3-203ENST00000525964 H0YIN7 160 aa16.37■□□□□ 0.21
NCAPD3-203ENST00000525964 KRT86O43790 486 aa16.37■□□□□ 0.21
NCAPD3-203ENST00000525964 RRP9O43818 475 aaKnown RBP16.37■□□□□ 0.21
NCAPD3-203ENST00000525964 TUBB4AP04350 444 aa16.37■□□□□ 0.21
NCAPD3-203ENST00000525964 NEK11Q8NG66 645 aa16.37■□□□□ 0.21
NCAPD3-203ENST00000525964 APPBP2Q92624 585 aa16.37■□□□□ 0.21
NCAPD3-203ENST00000525964 EDC4Q6P2E9 1401 aaKnown RBP16.37■□□□□ 0.21
NCAPD3-203ENST00000525964 EIF4G3O43432 1585 aaKnown RBP16.37■□□□□ 0.21
NCAPD3-203ENST00000525964 RILPL1Q5EBL4 403 aa16.37■□□□□ 0.21
NCAPD3-203ENST00000525964 CCDC65Q8IXS2 484 aa16.37■□□□□ 0.21
NCAPD3-203ENST00000525964 FAM212AQ96EL1 285 aa16.37■□□□□ 0.21
NCAPD3-203ENST00000525964 FAM107BQ9H098 131 aa16.37■□□□□ 0.21
NCAPD3-203ENST00000525964 CTAGE15A4D2H0 777 aa16.37■□□□□ 0.21
NCAPD3-203ENST00000525964 CTAGE8P0CG41 777 aa16.37■□□□□ 0.21
NCAPD3-203ENST00000525964 EIF6P56537 245 aaKnown RBP16.37■□□□□ 0.21
NCAPD3-203ENST00000525964 CTAGE6Q86UF2 777 aa16.37■□□□□ 0.21
NCAPD3-203ENST00000525964 CTAGE4Q8IX94 777 aa16.37■□□□□ 0.21
NCAPD3-203ENST00000525964 TNNI3KQ59H18 835 aa16.36■□□□□ 0.21
NCAPD3-203ENST00000525964 DPP8Q6V1X1 898 aaPredicted RBP16.36■□□□□ 0.21
NCAPD3-203ENST00000525964 RGS22Q8NE09 1264 aa16.36■□□□□ 0.21
NCAPD3-203ENST00000525964 DNAJC25Q9H1X3 360 aa16.36■□□□□ 0.21
NCAPD3-203ENST00000525964 SLC52A2Q9HAB3 445 aa16.36■□□□□ 0.21
NCAPD3-203ENST00000525964 FPGT-TNNI3KV9GXZ4 949 aa16.36■□□□□ 0.21
NCAPD3-203ENST00000525964 ZSWIM4Q9H7M6 989 aa16.36■□□□□ 0.21
NCAPD3-203ENST00000525964 LARGE2Q8N3Y3 721 aa16.36■□□□□ 0.21
NCAPD3-203ENST00000525964 IQCGQ9H095 443 aaKnown RBP16.36■□□□□ 0.21
NCAPD3-203ENST00000525964 ZBTB21Q9ULJ3 1066 aa16.36■□□□□ 0.21
NCAPD3-203ENST00000525964 PRIM1P49642 420 aaKnown RBP16.36■□□□□ 0.21
NCAPD3-203ENST00000525964 PLCD1P51178 756 aa16.36■□□□□ 0.21
NCAPD3-203ENST00000525964 PSMD1Q99460 953 aa16.36■□□□□ 0.21
NCAPD3-203ENST00000525964 DKC1O60832 514 aaKnown RBP eCLIP16.35■□□□□ 0.21
NCAPD3-203ENST00000525964 RLBP1P12271 317 aa16.35■□□□□ 0.21
NCAPD3-203ENST00000525964 DHX37Q8IY37 1157 aaKnown RBP16.35■□□□□ 0.21
NCAPD3-203ENST00000525964 PTGS1P23219 599 aa16.35■□□□□ 0.21
NCAPD3-203ENST00000525964 SP4Q02446 784 aa16.35■□□□□ 0.21
NCAPD3-203ENST00000525964 DEXIO95424 95 aa16.35■□□□□ 0.21
NCAPD3-203ENST00000525964 LPIN2Q92539 896 aa16.35■□□□□ 0.21
NCAPD3-203ENST00000525964 BIN2Q9UBW5 565 aaPredicted RBP16.35■□□□□ 0.21
NCAPD3-203ENST00000525964 IVNS1ABPQ9Y6Y0 642 aa16.35■□□□□ 0.21
NCAPD3-203ENST00000525964 EEF2P13639 858 aaKnown RBP16.35■□□□□ 0.21
NCAPD3-203ENST00000525964 TAF12Q16514 161 aa16.35■□□□□ 0.21
NCAPD3-203ENST00000525964 LETM2Q2VYF4 491 aa16.35■□□□□ 0.21
NCAPD3-203ENST00000525964 SV2BQ7L1I2 683 aa16.35■□□□□ 0.21
NCAPD3-203ENST00000525964 CCDC186Q7Z3E2 898 aa16.35■□□□□ 0.21
NCAPD3-203ENST00000525964 HSF2BPO75031 334 aa16.34■□□□□ 0.21
NCAPD3-203ENST00000525964 XAGE2Q96GT9 111 aa16.34■□□□□ 0.21
NCAPD3-203ENST00000525964 RXRAP19793 462 aa16.34■□□□□ 0.21
NCAPD3-203ENST00000525964 SYT1P21579 422 aa16.34■□□□□ 0.21
NCAPD3-203ENST00000525964 IL13P35225 146 aa16.34■□□□□ 0.21
NCAPD3-203ENST00000525964 ARID5AQ03989 594 aa16.34■□□□□ 0.21
NCAPD3-203ENST00000525964 DBNDD2Q9BQY9 259 aa16.34■□□□□ 0.21
NCAPD3-203ENST00000525964 ZKSCAN3Q9BRR0 538 aa16.34■□□□□ 0.21
NCAPD3-203ENST00000525964 SAP30BPQ9UHR5 308 aaKnown RBP16.34■□□□□ 0.21
NCAPD3-203ENST00000525964 SHANK2Q9UPX8 1470 aa16.34■□□□□ 0.21
NCAPD3-203ENST00000525964 POLR3GO15318 223 aaPredicted RBP16.34■□□□□ 0.21
NCAPD3-203ENST00000525964 PLCB3Q01970 1234 aa16.34■□□□□ 0.21
NCAPD3-203ENST00000525964 BMS1Q14692 1282 aaKnown RBP16.34■□□□□ 0.21
NCAPD3-203ENST00000525964 PPM1EQ8WY54 764 aa16.34■□□□□ 0.21
NCAPD3-203ENST00000525964 RNF187Q5TA31 235 aaPredicted RBP16.34■□□□□ 0.21
NCAPD3-203ENST00000525964 G2E3Q7L622 706 aa16.34■□□□□ 0.21
NCAPD3-203ENST00000525964 PRIMPOLQ96LW4 560 aa16.34■□□□□ 0.21
NCAPD3-203ENST00000525964 SLAIN2Q9P270 581 aa16.34■□□□□ 0.21
NCAPD3-203ENST00000525964 A0A1W2PRG0 241 aa16.33■□□□□ 0.21
NCAPD3-203ENST00000525964 CHL1O00533 1208 aa16.33■□□□□ 0.21
NCAPD3-203ENST00000525964 A1BGP04217 495 aa16.33■□□□□ 0.21
NCAPD3-203ENST00000525964 FAM98CQ17RN3 349 aaKnown RBP16.33■□□□□ 0.21
NCAPD3-203ENST00000525964 HAUS3Q68CZ6 603 aa16.33■□□□□ 0.21
NCAPD3-203ENST00000525964 GPCPD1Q9NPB8 672 aa16.33■□□□□ 0.21
NCAPD3-203ENST00000525964 B4E1Z4 1266 aa16.33■□□□□ 0.2
NCAPD3-203ENST00000525964 TBC1D22AQ8WUA7 517 aa16.33■□□□□ 0.2
NCAPD3-203ENST00000525964 DNAI1Q9UI46 699 aa16.33■□□□□ 0.2
NCAPD3-203ENST00000525964 ABCC2Q92887 1545 aa16.33■□□□□ 0.2
NCAPD3-203ENST00000525964 ZBTB7BO15156 539 aaPredicted RBP16.33■□□□□ 0.2
NCAPD3-203ENST00000525964 TYRO3Q06418 890 aa16.33■□□□□ 0.2
NCAPD3-203ENST00000525964 PPP2R5BQ15173 497 aa16.33■□□□□ 0.2
NCAPD3-203ENST00000525964 DNAJC10Q8IXB1 793 aa16.33■□□□□ 0.2
NCAPD3-203ENST00000525964 FCHSD1Q86WN1 690 aa16.33■□□□□ 0.2
NCAPD3-203ENST00000525964 TNNQ9UQP3 1299 aa16.33■□□□□ 0.2
NCAPD3-203ENST00000525964 LUC7L2Q9Y383 392 aaKnown RBP16.33■□□□□ 0.2
NCAPD3-203ENST00000525964 SMTNP53814 917 aa16.32■□□□□ 0.2
NCAPD3-203ENST00000525964 UBXN1Q04323 297 aa16.32■□□□□ 0.2
NCAPD3-203ENST00000525964 DPH6Q7L8W6 267 aa16.32■□□□□ 0.2
NCAPD3-203ENST00000525964 ANGEL1Q9UNK9 670 aaKnown RBP16.32■□□□□ 0.2
NCAPD3-203ENST00000525964 NOD1Q9Y239 953 aa16.32■□□□□ 0.2
NCAPD3-203ENST00000525964 ATP10AO60312 1499 aa16.32■□□□□ 0.2
NCAPD3-203ENST00000525964 FRMD4BQ9Y2L6 1034 aa16.32■□□□□ 0.2
NCAPD3-203ENST00000525964 STX17P56962 302 aa16.32■□□□□ 0.2
NCAPD3-203ENST00000525964 C6orf163Q5TEZ5 329 aa16.32■□□□□ 0.2
NCAPD3-203ENST00000525964 ARMT1Q9H993 441 aa16.32■□□□□ 0.2
NCAPD3-203ENST00000525964 VWA3AA6NCI4 1184 aa16.31■□□□□ 0.2
NCAPD3-203ENST00000525964 FNBP1Q96RU3 617 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms