RNA–Protein interactions for RNA: ENST00000525537.2

ATM-208, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-208ENST00000525537 NFKBIEO00221 500 aa8.45□□□□□ -1.06
ATM-208ENST00000525537 ADAM23O75077 832 aa8.45□□□□□ -1.06
ATM-208ENST00000525537 PAGE1O75459 146 aa8.45□□□□□ -1.06
ATM-208ENST00000525537 TRPA1O75762 1119 aa8.45□□□□□ -1.06
ATM-208ENST00000525537 ARHGEF15O94989 841 aa8.45□□□□□ -1.06
ATM-208ENST00000525537 DDR2Q16832 855 aa8.45□□□□□ -1.06
ATM-208ENST00000525537 BNC2Q6ZN30 1099 aaPredicted RBP8.45□□□□□ -1.06
ATM-208ENST00000525537 CELF2-AS1Q8N7Q2 184 aa8.45□□□□□ -1.06
ATM-208ENST00000525537 OR6P1Q8NGX9 317 aa8.45□□□□□ -1.06
ATM-208ENST00000525537 NXPE3Q969Y0 559 aa8.45□□□□□ -1.06
ATM-208ENST00000525537 COL25A1Q9BXS0 654 aaPredicted RBP8.45□□□□□ -1.06
ATM-208ENST00000525537 SLKQ9H2G2 1235 aaPredicted RBP8.45□□□□□ -1.06
ATM-208ENST00000525537 PCDH12Q9NPG4 1184 aa8.45□□□□□ -1.06
ATM-208ENST00000525537 FANCLQ9NW38 375 aa8.45□□□□□ -1.06
ATM-208ENST00000525537 DNMT3LQ9UJW3 386 aa8.45□□□□□ -1.06
ATM-208ENST00000525537 PPP1R12AO14974 1030 aaPredicted RBP8.44□□□□□ -1.06
ATM-208ENST00000525537 KHNYNO15037 678 aaKnown RBP8.44□□□□□ -1.06
ATM-208ENST00000525537 TLR3O15455 904 aaKnown RBP8.44□□□□□ -1.06
ATM-208ENST00000525537 LMNB1P20700 586 aa8.44□□□□□ -1.06
ATM-208ENST00000525537 ZNF165P49910 485 aa8.44□□□□□ -1.06
ATM-208ENST00000525537 TNP2Q05952 138 aa8.44□□□□□ -1.06
ATM-208ENST00000525537 FAAP100Q0VG06 881 aa8.44□□□□□ -1.06
ATM-208ENST00000525537 IFRD2Q12894 506 aaPredicted RBP8.44□□□□□ -1.06
ATM-208ENST00000525537 MPP2Q14168 576 aa8.44□□□□□ -1.06
ATM-208ENST00000525537 CWF19L2Q2TBE0 894 aaKnown RBP8.44□□□□□ -1.06
ATM-208ENST00000525537 LILRB2Q8N423 598 aa8.44□□□□□ -1.06
ATM-208ENST00000525537 FBXO27Q8NI29 283 aa8.44□□□□□ -1.06
ATM-208ENST00000525537 WHAMMQ8TF30 809 aa8.44□□□□□ -1.06
ATM-208ENST00000525537 APPBP2Q92624 585 aa8.44□□□□□ -1.06
ATM-208ENST00000525537 FERD3LQ96RJ6 166 aa8.44□□□□□ -1.06
ATM-208ENST00000525537 CRBNQ96SW2 442 aa8.44□□□□□ -1.06
ATM-208ENST00000525537 DNAJC7Q99615 494 aa8.44□□□□□ -1.06
ATM-208ENST00000525537 MIR1-1HGQ9H1L0 117 aa8.44□□□□□ -1.06
ATM-208ENST00000525537 ACTR10Q9NZ32 417 aa8.44□□□□□ -1.06
ATM-208ENST00000525537 GPN3Q9UHW5 284 aaPredicted RBP8.44□□□□□ -1.06
ATM-208ENST00000525537 DCDC2BA2VCK2 349 aa8.43□□□□□ -1.06
ATM-208ENST00000525537 FAM221AA4D161 298 aa8.43□□□□□ -1.06
ATM-208ENST00000525537 NRLP54845 237 aa8.43□□□□□ -1.06
ATM-208ENST00000525537 SPEM2Q0P670 501 aa8.43□□□□□ -1.06
ATM-208ENST00000525537 RASGRF1Q13972 1273 aa8.43□□□□□ -1.06
ATM-208ENST00000525537 ARSHQ5FYA8 562 aa8.43□□□□□ -1.06
ATM-208ENST00000525537 RNFT1Q5M7Z0 435 aa8.43□□□□□ -1.06
ATM-208ENST00000525537 DHX32Q7L7V1 743 aaKnown RBP8.43□□□□□ -1.06
ATM-208ENST00000525537 REXO1Q8N1G1 1221 aaKnown RBP8.43□□□□□ -1.06
ATM-208ENST00000525537 HHIPQ96QV1 700 aa8.43□□□□□ -1.06
ATM-208ENST00000525537 KANSL2Q9H9L4 492 aa8.43□□□□□ -1.06
ATM-208ENST00000525537 STRN4Q9NRL3 753 aa8.43□□□□□ -1.06
ATM-208ENST00000525537 TMEM39AQ9NV64 488 aa8.43□□□□□ -1.06
ATM-208ENST00000525537 SAMM50Q9Y512 469 aa8.43□□□□□ -1.06
ATM-208ENST00000525537 PDE2AO00408 941 aaPredicted RBP8.42□□□□□ -1.06
ATM-208ENST00000525537 PDPK1O15530 556 aa8.42□□□□□ -1.06
ATM-208ENST00000525537 THBS1P07996 1170 aa8.42□□□□□ -1.06
ATM-208ENST00000525537 SLURP2P0DP57 97 aa8.42□□□□□ -1.06
ATM-208ENST00000525537 MAPTP10636 758 aaKnown RBP8.42□□□□□ -1.06
ATM-208ENST00000525537 IMPDH2P12268 514 aa8.42□□□□□ -1.06
ATM-208ENST00000525537 MCM4P33991 863 aa8.42□□□□□ -1.06
ATM-208ENST00000525537 UBAP2LQ14157 1087 aaKnown RBP8.42□□□□□ -1.06
ATM-208ENST00000525537 NOL8Q76FK4 1167 aaKnown RBP8.42□□□□□ -1.06
ATM-208ENST00000525537 KIAA0907Q7Z7F0 614 aaPredicted RBP8.42□□□□□ -1.06
ATM-208ENST00000525537 HOMER1Q86YM7 354 aa8.42□□□□□ -1.06
ATM-208ENST00000525537 NSUN5Q96P11 429 aaKnown RBP8.42□□□□□ -1.06
ATM-208ENST00000525537 MARK1Q9P0L2 795 aa8.42□□□□□ -1.06
ATM-208ENST00000525537 ZNRF3Q9ULT6 936 aa8.42□□□□□ -1.06
ATM-208ENST00000525537 PCDHB5Q9Y5E4 795 aa8.42□□□□□ -1.06
ATM-208ENST00000525537 SENP3-EIF4A1A0A087X0R7 540 aa8.41□□□□□ -1.06
ATM-208ENST00000525537 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.41□□□□□ -1.06
ATM-208ENST00000525537 CILPO75339 1184 aa8.41□□□□□ -1.06
ATM-208ENST00000525537 PPP2R3AQ06190 1150 aa8.41□□□□□ -1.06
ATM-208ENST00000525537 FBXW10Q5XX13 1052 aa8.41□□□□□ -1.06
ATM-208ENST00000525537 DIEXFQ68CQ4 756 aaKnown RBP8.41□□□□□ -1.06
ATM-208ENST00000525537 REC114Q7Z4M0 266 aa8.41□□□□□ -1.06
ATM-208ENST00000525537 ASAP3Q8TDY4 903 aa8.41□□□□□ -1.06
ATM-208ENST00000525537 PLD4Q96BZ4 506 aa8.41□□□□□ -1.06
ATM-208ENST00000525537 ST7Q9NRC1 585 aa8.41□□□□□ -1.06
ATM-208ENST00000525537 TMEM260Q9NX78 707 aa8.41□□□□□ -1.06
ATM-208ENST00000525537 CYP8B1Q9UNU6 501 aa8.41□□□□□ -1.06
ATM-208ENST00000525537 MAPK8IP1Q9UQF2 711 aa8.41□□□□□ -1.06
ATM-208ENST00000525537 ESYT3A0FGR9 886 aa8.4□□□□□ -1.06
ATM-208ENST00000525537 BMP6P22004 513 aa8.4□□□□□ -1.06
ATM-208ENST00000525537 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.4□□□□□ -1.06
ATM-208ENST00000525537 RBBP8NLQ8NC74 664 aaPredicted RBP8.4□□□□□ -1.06
ATM-208ENST00000525537 NANOS1Q8WY41 292 aaKnown RBP8.4□□□□□ -1.06
ATM-208ENST00000525537 JARID2Q92833 1246 aaPredicted RBP8.4□□□□□ -1.06
ATM-208ENST00000525537 BHMTQ93088 406 aa8.4□□□□□ -1.06
ATM-208ENST00000525537 PBX4Q9BYU1 374 aa8.4□□□□□ -1.06
ATM-208ENST00000525537 KLHL42Q9P2K6 505 aa8.4□□□□□ -1.06
ATM-208ENST00000525537 NME2P22392 152 aa8.39□□□□□ -1.07
ATM-208ENST00000525537 GPLD1P80108 840 aa8.39□□□□□ -1.07
ATM-208ENST00000525537 FXNQ16595 210 aa8.39□□□□□ -1.07
ATM-208ENST00000525537 RASIP1Q5U651 963 aa8.39□□□□□ -1.07
ATM-208ENST00000525537 SCARF2Q96GP6 870 aaPredicted RBP8.39□□□□□ -1.07
ATM-208ENST00000525537 SLC30A3Q99726 388 aa8.39□□□□□ -1.07
ATM-208ENST00000525537 KRTAP9-2Q9BYQ4 174 aa8.39□□□□□ -1.07
ATM-208ENST00000525537 MUC3BQ9H195 1237 aa8.39□□□□□ -1.07
ATM-208ENST00000525537 NUCKS1Q9H1E3 243 aaKnown RBP8.39□□□□□ -1.07
ATM-208ENST00000525537 CLEC4MQ9H2X3 399 aaPredicted RBP8.39□□□□□ -1.07
ATM-208ENST00000525537 BRMS1Q9HCU9 246 aa8.39□□□□□ -1.07
ATM-208ENST00000525537 NDFIP2Q9NV92 336 aa8.39□□□□□ -1.07
ATM-208ENST00000525537 HCN2Q9UL51 889 aa8.39□□□□□ -1.07
ATM-208ENST00000525537 LOC102724428A0A0B4J2F2 783 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms