RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 ATP6V1AP38606 617 aa19.27■□□□□ 0.67
CCDC90B-203ENST00000525503 CRKLP46109 303 aaKnown RBP19.27■□□□□ 0.67
CCDC90B-203ENST00000525503 ZNF165P49910 485 aa19.27■□□□□ 0.67
CCDC90B-203ENST00000525503 CCDC152Q4G0S7 254 aa19.27■□□□□ 0.67
CCDC90B-203ENST00000525503 TBC1D10CQ8IV04 446 aa19.27■□□□□ 0.67
CCDC90B-203ENST00000525503 ZNF830Q96NB3 372 aaPredicted RBP19.27■□□□□ 0.67
CCDC90B-203ENST00000525503 STRBPQ96SI9 672 aaKnown RBP19.27■□□□□ 0.67
CCDC90B-203ENST00000525503 WWC3Q9ULE0 1092 aa19.27■□□□□ 0.67
CCDC90B-203ENST00000525503 ARAP2Q8WZ64 1704 aa19.26■□□□□ 0.67
CCDC90B-203ENST00000525503 PPFIA3O75145 1194 aa19.26■□□□□ 0.67
CCDC90B-203ENST00000525503 MPNDQ8N594 471 aa19.26■□□□□ 0.67
CCDC90B-203ENST00000525503 HELBQ8NG08 1087 aaPredicted RBP19.26■□□□□ 0.67
CCDC90B-203ENST00000525503 TMEM87BQ96K49 555 aa19.26■□□□□ 0.67
CCDC90B-203ENST00000525503 GOLPH3LQ9H4A5 285 aa19.26■□□□□ 0.67
CCDC90B-203ENST00000525503 RTL9Q8NET4 1388 aa19.26■□□□□ 0.67
CCDC90B-203ENST00000525503 SH2B2O14492 632 aaPredicted RBP19.25■□□□□ 0.67
CCDC90B-203ENST00000525503 STX1AQ16623 288 aa19.25■□□□□ 0.67
CCDC90B-203ENST00000525503 CPLX2Q6PUV4 134 aaKnown RBP19.25■□□□□ 0.67
CCDC90B-203ENST00000525503 DDX60Q8IY21 1712 aaKnown RBP19.25■□□□□ 0.67
CCDC90B-203ENST00000525503 FSIP1Q8NA03 581 aa19.25■□□□□ 0.67
CCDC90B-203ENST00000525503 KCNG4Q8TDN1 519 aa19.25■□□□□ 0.67
CCDC90B-203ENST00000525503 DNAJC25Q9H1X3 360 aa19.25■□□□□ 0.67
CCDC90B-203ENST00000525503 A0A1W2PQ27 194 aa19.25■□□□□ 0.67
CCDC90B-203ENST00000525503 A0A1W2PQ64 194 aa19.25■□□□□ 0.67
CCDC90B-203ENST00000525503 A0A1W2PQD8 194 aa19.25■□□□□ 0.67
CCDC90B-203ENST00000525503 PATL2C9JE40 543 aaKnown RBP19.25■□□□□ 0.67
CCDC90B-203ENST00000525503 CAMTA2O94983 1202 aa19.25■□□□□ 0.67
CCDC90B-203ENST00000525503 YEATS4O95619 227 aa19.25■□□□□ 0.67
CCDC90B-203ENST00000525503 SNW1Q13573 536 aaKnown RBP19.25■□□□□ 0.67
CCDC90B-203ENST00000525503 NOLC1Q14978 699 aaKnown RBP eCLIP19.25■□□□□ 0.67
CCDC90B-203ENST00000525503 ADALQ6DHV7 355 aa19.25■□□□□ 0.67
CCDC90B-203ENST00000525503 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.25■□□□□ 0.67
CCDC90B-203ENST00000525503 ENGASEQ8NFI3 743 aa19.25■□□□□ 0.67
CCDC90B-203ENST00000525503 MRPS27Q92552 414 aaKnown RBP19.25■□□□□ 0.67
CCDC90B-203ENST00000525503 POLR3EQ9NVU0 708 aa19.25■□□□□ 0.67
CCDC90B-203ENST00000525503 SLIT2O94813 1529 aa19.24■□□□□ 0.67
CCDC90B-203ENST00000525503 LOC102724428A0A0B4J2F2 783 aa19.24■□□□□ 0.67
CCDC90B-203ENST00000525503 IGHMBP2P38935 993 aaKnown RBP19.24■□□□□ 0.67
CCDC90B-203ENST00000525503 METAP2P50579 478 aaKnown RBP eCLIP19.24■□□□□ 0.67
CCDC90B-203ENST00000525503 SIK1P57059 783 aa19.24■□□□□ 0.67
CCDC90B-203ENST00000525503 CYB5R4Q7L1T6 521 aa19.24■□□□□ 0.67
CCDC90B-203ENST00000525503 SPTLC3Q9NUV7 552 aa19.24■□□□□ 0.67
CCDC90B-203ENST00000525503 A0A0G2JS52 829 aa19.23■□□□□ 0.67
CCDC90B-203ENST00000525503 RASGRF1Q13972 1273 aa19.23■□□□□ 0.67
CCDC90B-203ENST00000525503 STK38Q15208 465 aa19.23■□□□□ 0.67
CCDC90B-203ENST00000525503 SF3A1Q15459 793 aaKnown RBP19.23■□□□□ 0.67
CCDC90B-203ENST00000525503 SYNE3Q6ZMZ3 975 aa19.23■□□□□ 0.67
CCDC90B-203ENST00000525503 MAGEB6Q8N7X4 407 aa19.23■□□□□ 0.67
CCDC90B-203ENST00000525503 SPC24Q8NBT2 197 aa19.23■□□□□ 0.67
CCDC90B-203ENST00000525503 LINC00301Q8NCQ3 95 aa19.23■□□□□ 0.67
CCDC90B-203ENST00000525503 CNNM2Q9H8M5 875 aa19.23■□□□□ 0.67
CCDC90B-203ENST00000525503 PCDHA7Q9UN72 937 aa19.23■□□□□ 0.67
CCDC90B-203ENST00000525503 FAM177BA6PVY3 158 aa19.22■□□□□ 0.67
CCDC90B-203ENST00000525503 GOLGA6L19H0YKK7 550 aa19.22■□□□□ 0.67
CCDC90B-203ENST00000525503 GNAT2P19087 354 aa19.22■□□□□ 0.67
CCDC90B-203ENST00000525503 ZNF75DP51815 510 aa19.22■□□□□ 0.67
CCDC90B-203ENST00000525503 MYSM1Q5VVJ2 828 aa19.22■□□□□ 0.67
CCDC90B-203ENST00000525503 OTUD7BQ6GQQ9 843 aa19.22■□□□□ 0.67
CCDC90B-203ENST00000525503 PLA2G4DQ86XP0 818 aa19.22■□□□□ 0.67
CCDC90B-203ENST00000525503 TRIM5Q9C035 493 aa19.22■□□□□ 0.67
CCDC90B-203ENST00000525503 NAPBQ9H115 298 aa19.22■□□□□ 0.67
CCDC90B-203ENST00000525503 SEC31BQ9NQW1 1179 aa19.22■□□□□ 0.67
CCDC90B-203ENST00000525503 ANO10Q9NW15 660 aa19.22■□□□□ 0.67
CCDC90B-203ENST00000525503 RREB1Q92766 1687 aa19.22■□□□□ 0.67
CCDC90B-203ENST00000525503 B4E1Z4 1266 aa19.21■□□□□ 0.67
CCDC90B-203ENST00000525503 MBD4O95243 580 aa19.21■□□□□ 0.67
CCDC90B-203ENST00000525503 NTSR2O95665 410 aa19.21■□□□□ 0.67
CCDC90B-203ENST00000525503 DNTTIP2Q5QJE6 756 aaKnown RBP19.21■□□□□ 0.67
CCDC90B-203ENST00000525503 RAB11FIP4Q86YS3 637 aa19.21■□□□□ 0.67
CCDC90B-203ENST00000525503 IFNL3Q8IZI9 196 aa19.21■□□□□ 0.67
CCDC90B-203ENST00000525503 ACSBG1Q96GR2 724 aa19.21■□□□□ 0.67
CCDC90B-203ENST00000525503 NIP7Q9Y221 180 aaKnown RBP eCLIP19.21■□□□□ 0.67
CCDC90B-203ENST00000525503 ZNF652Q9Y2D9 606 aa19.21■□□□□ 0.67
CCDC90B-203ENST00000525503 ADAMTS2O95450 1211 aa19.21■□□□□ 0.67
CCDC90B-203ENST00000525503 POLR3DP05423 398 aaPredicted RBP19.21■□□□□ 0.67
CCDC90B-203ENST00000525503 KIF23Q02241 960 aaPredicted RBP19.21■□□□□ 0.67
CCDC90B-203ENST00000525503 APOA5Q6Q788 366 aa19.21■□□□□ 0.67
CCDC90B-203ENST00000525503 SGMS1Q86VZ5 419 aa19.21■□□□□ 0.67
CCDC90B-203ENST00000525503 FMR1NBQ8N0W7 255 aaPredicted RBP19.21■□□□□ 0.67
CCDC90B-203ENST00000525503 MARCH10Q8NA82 808 aaPredicted RBP19.21■□□□□ 0.67
CCDC90B-203ENST00000525503 SMARCC1Q92922 1105 aaPredicted RBP19.21■□□□□ 0.67
CCDC90B-203ENST00000525503 NACAP1Q9BZK3 213 aa19.21■□□□□ 0.67
CCDC90B-203ENST00000525503 CLIC4Q9Y696 253 aa19.21■□□□□ 0.67
CCDC90B-203ENST00000525503 CICQ96RK0 1608 aaPredicted RBP19.2■□□□□ 0.66
CCDC90B-203ENST00000525503 SPTLC2O15270 562 aa19.2■□□□□ 0.66
CCDC90B-203ENST00000525503 ZBTB43O43298 467 aa19.2■□□□□ 0.66
CCDC90B-203ENST00000525503 LIFRP42702 1097 aa19.2■□□□□ 0.66
CCDC90B-203ENST00000525503 ITPK1Q13572 414 aa19.2■□□□□ 0.66
CCDC90B-203ENST00000525503 NFXL1Q6ZNB6 911 aa19.2■□□□□ 0.66
CCDC90B-203ENST00000525503 DRC7Q8IY82 874 aa19.2■□□□□ 0.66
CCDC90B-203ENST00000525503 IGDCC4Q8TDY8 1250 aa19.2■□□□□ 0.66
CCDC90B-203ENST00000525503 KRT23Q9C075 422 aa19.2■□□□□ 0.66
CCDC90B-203ENST00000525503 NEDD4P46934 1319 aa19.2■□□□□ 0.66
CCDC90B-203ENST00000525503 CDC25BP30305 580 aa19.19■□□□□ 0.66
CCDC90B-203ENST00000525503 IQCB1Q15051 598 aa19.19■□□□□ 0.66
CCDC90B-203ENST00000525503 TMEM67Q5HYA8 995 aa19.19■□□□□ 0.66
CCDC90B-203ENST00000525503 SARM1Q6SZW1 724 aa19.19■□□□□ 0.66
CCDC90B-203ENST00000525503 KIAA1524Q8TCG1 905 aa19.19■□□□□ 0.66
CCDC90B-203ENST00000525503 ALG1Q9BT22 464 aa19.19■□□□□ 0.66
CCDC90B-203ENST00000525503 KCNF1Q9H3M0 494 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms