RNA–Protein interactions for RNA: ENST00000524775.1

CSTF3-205, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 4

Gene CSTF3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-205ENST00000524775 KRT32Q14532 448 aa14.03□□□□□ -0.16
CSTF3-205ENST00000524775 NSUN4Q96CB9 384 aaKnown RBP14.03□□□□□ -0.16
CSTF3-205ENST00000524775 EPB41L4AQ9HCS5 686 aaPredicted RBP14.03□□□□□ -0.16
CSTF3-205ENST00000524775 PDRG1Q9NUG6 133 aa14.03□□□□□ -0.16
CSTF3-205ENST00000524775 CYP46A1Q9Y6A2 500 aa14.03□□□□□ -0.16
CSTF3-205ENST00000524775 LAMB1P07942 1786 aa14.02□□□□□ -0.16
CSTF3-205ENST00000524775 ZMYM6O95789 1325 aa14.02□□□□□ -0.17
CSTF3-205ENST00000524775 PATL2C9JE40 543 aaKnown RBP14.02□□□□□ -0.17
CSTF3-205ENST00000524775 H0YIN7 160 aa14.02□□□□□ -0.17
CSTF3-205ENST00000524775 IGSF3O75054 1194 aa14.02□□□□□ -0.17
CSTF3-205ENST00000524775 MBD4O95243 580 aa14.02□□□□□ -0.17
CSTF3-205ENST00000524775 CYP7A1P22680 504 aa14.02□□□□□ -0.17
CSTF3-205ENST00000524775 PSMA5P28066 241 aa14.02□□□□□ -0.17
CSTF3-205ENST00000524775 CHRNA5P30532 468 aa14.02□□□□□ -0.17
CSTF3-205ENST00000524775 EXOSC10Q01780 885 aaKnown RBP14.02□□□□□ -0.17
CSTF3-205ENST00000524775 GRIK5Q16478 980 aa14.02□□□□□ -0.17
CSTF3-205ENST00000524775 ERICH6Q7L0X2 663 aa14.02□□□□□ -0.17
CSTF3-205ENST00000524775 ZNF804AQ7Z570 1209 aa14.02□□□□□ -0.17
CSTF3-205ENST00000524775 LCORLQ8N3X6 602 aa14.02□□□□□ -0.17
CSTF3-205ENST00000524775 RIOK1Q9BRS2 568 aaKnown RBP14.02□□□□□ -0.17
CSTF3-205ENST00000524775 ARMT1Q9H993 441 aa14.02□□□□□ -0.17
CSTF3-205ENST00000524775 ABCF2Q9UG63 623 aa14.02□□□□□ -0.17
CSTF3-205ENST00000524775 CTNNA3Q9UI47 895 aa14.02□□□□□ -0.17
CSTF3-205ENST00000524775 FAM205AQ6ZU69 1335 aa14.01□□□□□ -0.17
CSTF3-205ENST00000524775 E7EWF7 191 aa14.01□□□□□ -0.17
CSTF3-205ENST00000524775 PRKAB2O43741 272 aa14.01□□□□□ -0.17
CSTF3-205ENST00000524775 LARGE1O95461 756 aa14.01□□□□□ -0.17
CSTF3-205ENST00000524775 MECOMQ03112 1051 aa14.01□□□□□ -0.17
CSTF3-205ENST00000524775 CHAF1AQ13111 956 aaPredicted RBP14.01□□□□□ -0.17
CSTF3-205ENST00000524775 TOB2Q14106 344 aaPredicted RBP14.01□□□□□ -0.17
CSTF3-205ENST00000524775 TMED8Q6PL24 325 aaPredicted RBP14.01□□□□□ -0.17
CSTF3-205ENST00000524775 BLOC1S2Q6QNY1 142 aa14.01□□□□□ -0.17
CSTF3-205ENST00000524775 MPNDQ8N594 471 aa14.01□□□□□ -0.17
CSTF3-205ENST00000524775 ZNF622Q969S3 477 aaKnown RBP eCLIP14.01□□□□□ -0.175e-17■■□□□ 12.5
CSTF3-205ENST00000524775 NEK1Q96PY6 1258 aa14.01□□□□□ -0.17
CSTF3-205ENST00000524775 CHMP5Q9NZZ3 219 aa14.01□□□□□ -0.17
CSTF3-205ENST00000524775 RAI14Q9P0K7 980 aa14.01□□□□□ -0.17
CSTF3-205ENST00000524775 CIZ1Q9ULV3 898 aaPredicted RBP14.01□□□□□ -0.17
CSTF3-205ENST00000524775 LIMCH1Q9UPQ0 1083 aa14.01□□□□□ -0.17
CSTF3-205ENST00000524775 TACC3Q9Y6A5 838 aa14.01□□□□□ -0.17
CSTF3-205ENST00000524775 ECM29Q5VYK3 1845 aa14□□□□□ -0.17
CSTF3-205ENST00000524775 KCNA3P22001 575 aa14□□□□□ -0.17
CSTF3-205ENST00000524775 PRDX5P30044 214 aa14□□□□□ -0.17
CSTF3-205ENST00000524775 ST3GAL1Q11201 340 aa14□□□□□ -0.17
CSTF3-205ENST00000524775 IFNL3Q8IZI9 196 aa14□□□□□ -0.17
CSTF3-205ENST00000524775 ZGPATQ8N5A5 531 aaKnown RBP14□□□□□ -0.17
CSTF3-205ENST00000524775 NKX2-3Q8TAU0 364 aa14□□□□□ -0.17
CSTF3-205ENST00000524775 WDR66Q8TBY9 1149 aa14□□□□□ -0.17
CSTF3-205ENST00000524775 AIDAQ96BJ3 306 aa14□□□□□ -0.17
CSTF3-205ENST00000524775 RTFDC1Q9BY42 306 aaPredicted RBP14□□□□□ -0.17
CSTF3-205ENST00000524775 FOXD4L1Q9NU39 408 aa14□□□□□ -0.17
CSTF3-205ENST00000524775 C6orf229H3BNL8 230 aa13.99□□□□□ -0.17
CSTF3-205ENST00000524775 DYNLL1P63167 89 aaKnown RBP13.99□□□□□ -0.17
CSTF3-205ENST00000524775 NAA16Q6N069 864 aaPredicted RBP13.99□□□□□ -0.17
CSTF3-205ENST00000524775 MIGA1Q8NAN2 632 aa13.99□□□□□ -0.17
CSTF3-205ENST00000524775 UPF1Q92900 1129 aaKnown RBP eCLIP13.99□□□□□ -0.17
CSTF3-205ENST00000524775 CNKSR1Q969H4 720 aa13.99□□□□□ -0.17
CSTF3-205ENST00000524775 INTS4Q96HW7 963 aaKnown RBP13.99□□□□□ -0.17
CSTF3-205ENST00000524775 TCEANC2Q96MN5 208 aa13.99□□□□□ -0.17
CSTF3-205ENST00000524775 LARP6Q9BRS8 491 aaKnown RBP13.99□□□□□ -0.17
CSTF3-205ENST00000524775 AGXT2Q9BYV1 514 aa13.99□□□□□ -0.17
CSTF3-205ENST00000524775 JAG2Q9Y219 1238 aa13.99□□□□□ -0.17
CSTF3-205ENST00000524775 MYH1P12882 1939 aa13.99□□□□□ -0.17
CSTF3-205ENST00000524775 TCHHQ07283 1943 aa13.99□□□□□ -0.17
CSTF3-205ENST00000524775 FER1L6Q2WGJ9 1857 aa13.98□□□□□ -0.17
CSTF3-205ENST00000524775 NAV1Q8NEY1 1877 aa13.98□□□□□ -0.17
CSTF3-205ENST00000524775 MAGEB6P1A0A0J9YX57 407 aa13.98□□□□□ -0.17
CSTF3-205ENST00000524775 FRAT2O75474 233 aaPredicted RBP13.98□□□□□ -0.17
CSTF3-205ENST00000524775 GNAT2P19087 354 aa13.98□□□□□ -0.17
CSTF3-205ENST00000524775 HAND2P61296 217 aa13.98□□□□□ -0.17
CSTF3-205ENST00000524775 IMMTQ16891 758 aaKnown RBP13.98□□□□□ -0.17
CSTF3-205ENST00000524775 SPTY2D1Q68D10 685 aaPredicted RBP13.98□□□□□ -0.17
CSTF3-205ENST00000524775 NOL8Q76FK4 1167 aaKnown RBP13.98□□□□□ -0.17
CSTF3-205ENST00000524775 DHX32Q7L7V1 743 aaKnown RBP13.98□□□□□ -0.17
CSTF3-205ENST00000524775 TBC1D10CQ8IV04 446 aa13.98□□□□□ -0.17
CSTF3-205ENST00000524775 MB21D2Q8IYB1 491 aaPredicted RBP13.98□□□□□ -0.17
CSTF3-205ENST00000524775 FBXL16Q8N461 479 aa13.98□□□□□ -0.17
CSTF3-205ENST00000524775 ZSCAN31Q96LW9 406 aaPredicted RBP13.98□□□□□ -0.17
CSTF3-205ENST00000524775 COA1Q9GZY4 146 aa13.98□□□□□ -0.17
CSTF3-205ENST00000524775 TPCN1Q9ULQ1 816 aa13.98□□□□□ -0.17
CSTF3-205ENST00000524775 ADAMTSL1Q8N6G6 1762 aa13.98□□□□□ -0.17
CSTF3-205ENST00000524775 DDX60LQ5H9U9 1706 aaKnown RBP13.98□□□□□ -0.17
CSTF3-205ENST00000524775 HMGB1P09429 215 aaKnown RBP13.97□□□□□ -0.17
CSTF3-205ENST00000524775 ME3Q16798 604 aa13.97□□□□□ -0.17
CSTF3-205ENST00000524775 DPP8Q6V1X1 898 aaPredicted RBP13.97□□□□□ -0.17
CSTF3-205ENST00000524775 CWC22Q9HCG8 908 aaKnown RBP13.97□□□□□ -0.17
CSTF3-205ENST00000524775 SLC4A4Q9Y6R1 1079 aa13.97□□□□□ -0.17
CSTF3-205ENST00000524775 ZNF213O14771 459 aa13.96□□□□□ -0.17
CSTF3-205ENST00000524775 RIMBP2O15034 1052 aa13.96□□□□□ -0.17
CSTF3-205ENST00000524775 LDHBP07195 334 aaKnown RBP13.96□□□□□ -0.17
CSTF3-205ENST00000524775 ANTXR2P58335 489 aa13.96□□□□□ -0.17
CSTF3-205ENST00000524775 PPP4CP60510 307 aa13.96□□□□□ -0.17
CSTF3-205ENST00000524775 RAB3GAP1Q15042 981 aa13.96□□□□□ -0.17
CSTF3-205ENST00000524775 SGIP1Q9BQI5 828 aa13.96□□□□□ -0.17
CSTF3-205ENST00000524775 DPEP1P16444 411 aa13.95□□□□□ -0.18
CSTF3-205ENST00000524775 EVCP57679 992 aa13.95□□□□□ -0.18
CSTF3-205ENST00000524775 ANKRD1Q15327 319 aa13.95□□□□□ -0.18
CSTF3-205ENST00000524775 Q6ZUG5 572 aa13.95□□□□□ -0.18
CSTF3-205ENST00000524775 FAM163AQ96GL9 167 aaPredicted RBP13.95□□□□□ -0.18
CSTF3-205ENST00000524775 ZC3H12CQ9C0D7 883 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms