RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 TERF1P54274 439 aa16.16■□□□□ 0.18
LDLRAD3-202ENST00000524419 ERFEQ4G0M1 354 aa16.16■□□□□ 0.18
LDLRAD3-202ENST00000524419 MAGEB6Q8N7X4 407 aa16.16■□□□□ 0.18
LDLRAD3-202ENST00000524419 LEO1Q8WVC0 666 aaPredicted RBP16.16■□□□□ 0.18
LDLRAD3-202ENST00000524419 ZMYM6O95789 1325 aa16.16■□□□□ 0.18
LDLRAD3-202ENST00000524419 COL24A1Q17RW2 1714 aa16.16■□□□□ 0.18
LDLRAD3-202ENST00000524419 COL4A1P02462 1669 aa16.15■□□□□ 0.18
LDLRAD3-202ENST00000524419 KLF18A0A0U1RQI7 1052 aa16.15■□□□□ 0.18
LDLRAD3-202ENST00000524419 GOLGA8BA8MQT2 603 aa16.15■□□□□ 0.18
LDLRAD3-202ENST00000524419 SNAP23O00161 211 aa16.15■□□□□ 0.18
LDLRAD3-202ENST00000524419 ANKRD18AQ8IVF6 992 aa16.15■□□□□ 0.18
LDLRAD3-202ENST00000524419 STRBPQ96SI9 672 aaKnown RBP16.15■□□□□ 0.18
LDLRAD3-202ENST00000524419 C4AP0C0L4 1744 aa16.15■□□□□ 0.18
LDLRAD3-202ENST00000524419 C4BP0C0L5 1744 aa16.15■□□□□ 0.18
LDLRAD3-202ENST00000524419 AFF2P51816 1311 aa16.15■□□□□ 0.18
LDLRAD3-202ENST00000524419 TIAM2Q8IVF5 1701 aa16.15■□□□□ 0.18
LDLRAD3-202ENST00000524419 DHX16O60231 1041 aaKnown RBP16.15■□□□□ 0.18
LDLRAD3-202ENST00000524419 FOSBP53539 338 aa16.15■□□□□ 0.18
LDLRAD3-202ENST00000524419 ANTXR2P58335 489 aa16.15■□□□□ 0.18
LDLRAD3-202ENST00000524419 ALX1Q15699 326 aa16.15■□□□□ 0.18
LDLRAD3-202ENST00000524419 NBPF3Q9H094 633 aa16.15■□□□□ 0.18
LDLRAD3-202ENST00000524419 GPHNQ9NQX3 736 aaPredicted RBP16.15■□□□□ 0.18
LDLRAD3-202ENST00000524419 TFIP11Q9UBB9 837 aaKnown RBP16.15■□□□□ 0.18
LDLRAD3-202ENST00000524419 CFAP45Q9UL16 551 aa16.15■□□□□ 0.18
LDLRAD3-202ENST00000524419 CARMIL3Q8ND23 1372 aa16.14■□□□□ 0.18
LDLRAD3-202ENST00000524419 TAF1P21675 1872 aa16.14■□□□□ 0.17
LDLRAD3-202ENST00000524419 MBD4O95243 580 aa16.14■□□□□ 0.17
LDLRAD3-202ENST00000524419 BCAMP50895 628 aa16.14■□□□□ 0.17
LDLRAD3-202ENST00000524419 TBC1D10CQ8IV04 446 aa16.14■□□□□ 0.17
LDLRAD3-202ENST00000524419 FNBP4Q8N3X1 1017 aaPredicted RBP16.14■□□□□ 0.17
LDLRAD3-202ENST00000524419 SF3B3Q15393 1217 aaKnown RBP16.13■□□□□ 0.17
LDLRAD3-202ENST00000524419 RC3H1Q5TC82 1133 aaKnown RBP16.13■□□□□ 0.17
LDLRAD3-202ENST00000524419 UPF1Q92900 1129 aaKnown RBP eCLIP16.13■□□□□ 0.17
LDLRAD3-202ENST00000524419 GTF2E1P29083 439 aaPredicted RBP16.13■□□□□ 0.17
LDLRAD3-202ENST00000524419 KCNQ4P56696 695 aa16.13■□□□□ 0.17
LDLRAD3-202ENST00000524419 TAF1LQ8IZX4 1826 aa16.12■□□□□ 0.17
LDLRAD3-202ENST00000524419 PATL2C9JE40 543 aaKnown RBP16.12■□□□□ 0.17
LDLRAD3-202ENST00000524419 GIMAP6Q6P9H5 292 aa16.12■□□□□ 0.17
LDLRAD3-202ENST00000524419 BICDL1Q6ZP65 573 aa16.12■□□□□ 0.17
LDLRAD3-202ENST00000524419 FUCA2Q9BTY2 467 aa16.12■□□□□ 0.17
LDLRAD3-202ENST00000524419 NYXQ9GZU5 481 aa16.12■□□□□ 0.17
LDLRAD3-202ENST00000524419 GNL3LQ9NVN8 582 aaKnown RBP16.12■□□□□ 0.17
LDLRAD3-202ENST00000524419 USP21Q9UK80 565 aa16.12■□□□□ 0.17
LDLRAD3-202ENST00000524419 LY75O60449 1722 aa16.11■□□□□ 0.17
LDLRAD3-202ENST00000524419 RPS6KA4O75676 772 aa16.11■□□□□ 0.17
LDLRAD3-202ENST00000524419 GNAT2P19087 354 aa16.11■□□□□ 0.17
LDLRAD3-202ENST00000524419 TBC1D9BQ66K14 1250 aa16.11■□□□□ 0.17
LDLRAD3-202ENST00000524419 C3orf67Q6ZVT6 689 aa16.11■□□□□ 0.17
LDLRAD3-202ENST00000524419 ZNF396Q96N95 335 aaPredicted RBP16.11■□□□□ 0.17
LDLRAD3-202ENST00000524419 NAPBQ9H115 298 aa16.11■□□□□ 0.17
LDLRAD3-202ENST00000524419 NUP62CLQ9H1M0 184 aa16.11■□□□□ 0.17
LDLRAD3-202ENST00000524419 BSDC1Q9NW68 430 aaPredicted RBP16.11■□□□□ 0.17
LDLRAD3-202ENST00000524419 NARFQ9UHQ1 456 aa16.11■□□□□ 0.17
LDLRAD3-202ENST00000524419 ANGEL1Q9UNK9 670 aaKnown RBP16.11■□□□□ 0.17
LDLRAD3-202ENST00000524419 HPS5Q9UPZ3 1129 aa16.11■□□□□ 0.17
LDLRAD3-202ENST00000524419 MYH13Q9UKX3 1938 aa16.11■□□□□ 0.17
LDLRAD3-202ENST00000524419 CPLX1O14810 134 aa16.11■□□□□ 0.17
LDLRAD3-202ENST00000524419 PTMAP06454 111 aaKnown RBP16.11■□□□□ 0.17
LDLRAD3-202ENST00000524419 LIG1P18858 919 aa16.11■□□□□ 0.17
LDLRAD3-202ENST00000524419 RBM6P78332 1123 aaKnown RBP16.11■□□□□ 0.17
LDLRAD3-202ENST00000524419 ATL3Q6DD88 541 aa16.11■□□□□ 0.17
LDLRAD3-202ENST00000524419 ARMT1Q9H993 441 aa16.11■□□□□ 0.17
LDLRAD3-202ENST00000524419 DDX19AQ9NUU7 478 aaKnown RBP16.11■□□□□ 0.17
LDLRAD3-202ENST00000524419 LRP2BPQ9P2M1 347 aa16.11■□□□□ 0.17
LDLRAD3-202ENST00000524419 ZNF804BA4D1E1 1349 aa16.1■□□□□ 0.17
LDLRAD3-202ENST00000524419 PNPLA7Q6ZV29 1317 aa16.1■□□□□ 0.17
LDLRAD3-202ENST00000524419 SH2B2O14492 632 aaPredicted RBP16.1■□□□□ 0.17
LDLRAD3-202ENST00000524419 UBE4AQ14139 1066 aa16.1■□□□□ 0.17
LDLRAD3-202ENST00000524419 MAP3K11Q16584 847 aa16.1■□□□□ 0.17
LDLRAD3-202ENST00000524419 SLC10A5Q5PT55 438 aa16.1■□□□□ 0.17
LDLRAD3-202ENST00000524419 CYB5R4Q7L1T6 521 aa16.1■□□□□ 0.17
LDLRAD3-202ENST00000524419 PTF1AQ7RTS3 328 aa16.1■□□□□ 0.17
LDLRAD3-202ENST00000524419 IFNL3Q8IZI9 196 aa16.1■□□□□ 0.17
LDLRAD3-202ENST00000524419 BICD2Q8TD16 824 aa16.1■□□□□ 0.17
LDLRAD3-202ENST00000524419 NACAP1Q9BZK3 213 aa16.1■□□□□ 0.17
LDLRAD3-202ENST00000524419 QTRT2Q9H974 415 aaKnown RBP16.1■□□□□ 0.17
LDLRAD3-202ENST00000524419 BCL2L12Q9HB09 334 aa16.1■□□□□ 0.17
LDLRAD3-202ENST00000524419 EPB41L4AQ9HCS5 686 aaPredicted RBP16.1■□□□□ 0.17
LDLRAD3-202ENST00000524419 SBF2Q86WG5 1849 aa16.1■□□□□ 0.17
LDLRAD3-202ENST00000524419 NEDD4P46934 1319 aa16.1■□□□□ 0.17
LDLRAD3-202ENST00000524419 GNPATO15228 680 aa16.09■□□□□ 0.17
LDLRAD3-202ENST00000524419 ZPR1O75312 459 aa16.09■□□□□ 0.17
LDLRAD3-202ENST00000524419 FDPSP14324 419 aaKnown RBP16.09■□□□□ 0.17
LDLRAD3-202ENST00000524419 TMEM87BQ96K49 555 aa16.09■□□□□ 0.17
LDLRAD3-202ENST00000524419 CCNL1Q9UK58 526 aaPredicted RBP16.09■□□□□ 0.17
LDLRAD3-202ENST00000524419 ECM29Q5VYK3 1845 aa16.09■□□□□ 0.17
LDLRAD3-202ENST00000524419 B4E1Z4 1266 aa16.09■□□□□ 0.17
LDLRAD3-202ENST00000524419 PPFIA3O75145 1194 aa16.09■□□□□ 0.17
LDLRAD3-202ENST00000524419 CCDC192P0DO97 292 aa16.09■□□□□ 0.17
LDLRAD3-202ENST00000524419 GUCY1B3Q02153 619 aa16.09■□□□□ 0.17
LDLRAD3-202ENST00000524419 C8orf76Q96K31 380 aa16.09■□□□□ 0.17
LDLRAD3-202ENST00000524419 SETDB2Q96T68 719 aa16.09■□□□□ 0.17
LDLRAD3-202ENST00000524419 CNNM2Q9H8M5 875 aa16.09■□□□□ 0.17
LDLRAD3-202ENST00000524419 ORC3Q9UBD5 711 aaPredicted RBP16.09■□□□□ 0.17
LDLRAD3-202ENST00000524419 TDO2P48775 406 aa16.08■□□□□ 0.16
LDLRAD3-202ENST00000524419 CAVIN4Q5BKX8 364 aa16.08■□□□□ 0.16
LDLRAD3-202ENST00000524419 NBPF5PQ86XG9 351 aaPredicted RBP16.08■□□□□ 0.16
LDLRAD3-202ENST00000524419 RAB11FIP4Q86YS3 637 aa16.08■□□□□ 0.16
LDLRAD3-202ENST00000524419 LCORLQ8N3X6 602 aa16.08■□□□□ 0.16
LDLRAD3-202ENST00000524419 PGBD1Q96JS3 809 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms