RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 KIF23Q02241 960 aaPredicted RBP20.8■□□□□ 0.92
IKBKB-228ENST00000523517 SYNE3Q6ZMZ3 975 aa20.8■□□□□ 0.92
IKBKB-228ENST00000523517 NBPF3Q9H094 633 aa20.8■□□□□ 0.92
IKBKB-228ENST00000523517 NWD2Q9ULI1 1742 aa20.8■□□□□ 0.92
IKBKB-228ENST00000523517 CDHR2Q9BYE9 1310 aa20.79■□□□□ 0.92
IKBKB-228ENST00000523517 GIGYF2Q6Y7W6 1299 aaKnown RBP20.79■□□□□ 0.92
IKBKB-228ENST00000523517 FILIP1Q7Z7B0 1213 aa20.79■□□□□ 0.92
IKBKB-228ENST00000523517 PDCL2Q8N4E4 241 aa20.79■□□□□ 0.92
IKBKB-228ENST00000523517 ASAP1Q9ULH1 1129 aa20.79■□□□□ 0.92
IKBKB-228ENST00000523517 MAP3K15Q6ZN16 1313 aa20.79■□□□□ 0.92
IKBKB-228ENST00000523517 CCDC69A6NI79 296 aa20.79■□□□□ 0.92
IKBKB-228ENST00000523517 SKILP12757 684 aa20.79■□□□□ 0.92
IKBKB-228ENST00000523517 ITGA6P23229 1130 aa20.79■□□□□ 0.92
IKBKB-228ENST00000523517 TRDNQ13061 729 aa20.79■□□□□ 0.92
IKBKB-228ENST00000523517 ANO1Q5XXA6 986 aa20.79■□□□□ 0.92
IKBKB-228ENST00000523517 RGS22Q8NE09 1264 aa20.79■□□□□ 0.92
IKBKB-228ENST00000523517 TTLL11Q8NHH1 800 aa20.79■□□□□ 0.92
IKBKB-228ENST00000523517 ZNF512BQ96KM6 892 aaPredicted RBP20.79■□□□□ 0.92
IKBKB-228ENST00000523517 GREM2Q9H772 168 aa20.79■□□□□ 0.92
IKBKB-228ENST00000523517 NEDD4P46934 1319 aa20.78■□□□□ 0.92
IKBKB-228ENST00000523517 STARD3NLO95772 234 aa20.78■□□□□ 0.92
IKBKB-228ENST00000523517 ZRSR1Q15695 479 aaKnown RBP20.78■□□□□ 0.92
IKBKB-228ENST00000523517 PPP4R3BQ5MIZ7 849 aa20.78■□□□□ 0.92
IKBKB-228ENST00000523517 SLC9C2Q5TAH2 1124 aa20.78■□□□□ 0.92
IKBKB-228ENST00000523517 BPIFA3Q9BQP9 254 aa20.78■□□□□ 0.92
IKBKB-228ENST00000523517 EVA1CP58658 441 aa20.78■□□□□ 0.92
IKBKB-228ENST00000523517 DPCR1Q3MIW9 517 aa20.78■□□□□ 0.92
IKBKB-228ENST00000523517 NLRP10Q86W26 655 aa20.78■□□□□ 0.92
IKBKB-228ENST00000523517 SOS2Q07890 1332 aaPredicted RBP20.77■□□□□ 0.92
IKBKB-228ENST00000523517 ZNF202O95125 648 aa20.77■□□□□ 0.92
IKBKB-228ENST00000523517 GPTP24298 496 aa20.77■□□□□ 0.92
IKBKB-228ENST00000523517 TTF1Q15361 905 aaPredicted RBP20.77■□□□□ 0.92
IKBKB-228ENST00000523517 HLFQ16534 295 aa20.77■□□□□ 0.92
IKBKB-228ENST00000523517 AXDND1Q5T1B0 1012 aaPredicted RBP20.77■□□□□ 0.92
IKBKB-228ENST00000523517 TBC1D10CQ8IV04 446 aa20.77■□□□□ 0.92
IKBKB-228ENST00000523517 PIGBQ92521 554 aa20.77■□□□□ 0.92
IKBKB-228ENST00000523517 CNNM1Q9NRU3 951 aa20.77■□□□□ 0.92
IKBKB-228ENST00000523517 ANGEL1Q9UNK9 670 aaKnown RBP20.77■□□□□ 0.92
IKBKB-228ENST00000523517 ZMYM6O95789 1325 aa20.77■□□□□ 0.91
IKBKB-228ENST00000523517 ANKRD18BA2A2Z9 1011 aa20.77■□□□□ 0.91
IKBKB-228ENST00000523517 SLC3A2P08195 630 aaKnown RBP20.77■□□□□ 0.91
IKBKB-228ENST00000523517 CMA1P23946 247 aa20.77■□□□□ 0.91
IKBKB-228ENST00000523517 CCZ1BP86790 482 aa20.77■□□□□ 0.91
IKBKB-228ENST00000523517 CCZ1P86791 482 aaPredicted RBP20.77■□□□□ 0.91
IKBKB-228ENST00000523517 CEP135Q66GS9 1140 aa20.77■□□□□ 0.91
IKBKB-228ENST00000523517 PIH1D3Q9NQM4 214 aaKnown RBP20.77■□□□□ 0.91
IKBKB-228ENST00000523517 DENND2AQ9ULE3 1009 aa20.77■□□□□ 0.91
IKBKB-228ENST00000523517 CTSWP56202 376 aa20.76■□□□□ 0.91
IKBKB-228ENST00000523517 UBE3CQ15386 1083 aa20.76■□□□□ 0.91
IKBKB-228ENST00000523517 SYCP1Q15431 976 aa20.76■□□□□ 0.91
IKBKB-228ENST00000523517 SMAP1Q8IYB5 467 aaPredicted RBP20.76■□□□□ 0.91
IKBKB-228ENST00000523517 CCDC112Q8NEF3 446 aa20.76■□□□□ 0.91
IKBKB-228ENST00000523517 USP27XA6NNY8 438 aa20.75■□□□□ 0.91
IKBKB-228ENST00000523517 CYB5R4Q7L1T6 521 aa20.75■□□□□ 0.91
IKBKB-228ENST00000523517 VGLL2Q8N8G2 317 aa20.75■□□□□ 0.91
IKBKB-228ENST00000523517 SH2B2O14492 632 aaPredicted RBP20.75■□□□□ 0.91
IKBKB-228ENST00000523517 PFKFB1P16118 471 aa20.75■□□□□ 0.91
IKBKB-228ENST00000523517 GSDMDP57764 484 aa20.75■□□□□ 0.91
IKBKB-228ENST00000523517 NCBP1Q09161 790 aaKnown RBP20.75■□□□□ 0.91
IKBKB-228ENST00000523517 NBPF11Q86T75 865 aa20.75■□□□□ 0.91
IKBKB-228ENST00000523517 NKX2-3Q8TAU0 364 aa20.75■□□□□ 0.91
IKBKB-228ENST00000523517 ATRNO75882 1429 aa20.75■□□□□ 0.91
IKBKB-228ENST00000523517 APPP05067 770 aa20.74■□□□□ 0.91
IKBKB-228ENST00000523517 METAP2P50579 478 aaKnown RBP eCLIP20.74■□□□□ 0.91
IKBKB-228ENST00000523517 NLRP12P59046 1061 aa20.74■□□□□ 0.91
IKBKB-228ENST00000523517 SLC39A14Q15043 492 aa20.74■□□□□ 0.91
IKBKB-228ENST00000523517 ALG1Q9BT22 464 aa20.74■□□□□ 0.91
IKBKB-228ENST00000523517 OSBPL5Q9H0X9 879 aaPredicted RBP20.74■□□□□ 0.91
IKBKB-228ENST00000523517 IMPACTQ9P2X3 320 aa20.74■□□□□ 0.91
IKBKB-228ENST00000523517 WDHD1O75717 1129 aaPredicted RBP20.74■□□□□ 0.91
IKBKB-228ENST00000523517 IDH1O75874 414 aaKnown RBP20.74■□□□□ 0.91
IKBKB-228ENST00000523517 CDKL5O76039 1030 aa20.74■□□□□ 0.91
IKBKB-228ENST00000523517 NYAP1Q6ZVC0 841 aa20.74■□□□□ 0.91
IKBKB-228ENST00000523517 AIFM3Q96NN9 605 aa20.74■□□□□ 0.91
IKBKB-228ENST00000523517 ZNF532Q9HCE3 1301 aa20.73■□□□□ 0.91
IKBKB-228ENST00000523517 BIN1O00499 593 aa20.73■□□□□ 0.91
IKBKB-228ENST00000523517 IRS4O14654 1257 aaPredicted RBP20.73■□□□□ 0.91
IKBKB-228ENST00000523517 PDE8BO95263 885 aa20.73■□□□□ 0.91
IKBKB-228ENST00000523517 PTPN14Q15678 1187 aa20.73■□□□□ 0.91
IKBKB-228ENST00000523517 ZNF592Q92610 1267 aa20.73■□□□□ 0.91
IKBKB-228ENST00000523517 KCND1Q9NSA2 647 aa20.73■□□□□ 0.91
IKBKB-228ENST00000523517 SHANK3Q9BYB0 1731 aa20.72■□□□□ 0.91
IKBKB-228ENST00000523517 PDE6AP16499 860 aa20.72■□□□□ 0.91
IKBKB-228ENST00000523517 CCDC102BQ68D86 513 aa20.72■□□□□ 0.91
IKBKB-228ENST00000523517 MARCKSP29966 332 aaPredicted RBP20.72■□□□□ 0.91
IKBKB-228ENST00000523517 KRT40Q6A162 431 aa20.72■□□□□ 0.91
IKBKB-228ENST00000523517 CPLX2Q6PUV4 134 aaKnown RBP20.72■□□□□ 0.91
IKBKB-228ENST00000523517 APOA5Q6Q788 366 aa20.72■□□□□ 0.91
IKBKB-228ENST00000523517 VPS37DQ86XT2 251 aa20.72■□□□□ 0.91
IKBKB-228ENST00000523517 CCAR2Q8N163 923 aaKnown RBP20.72■□□□□ 0.91
IKBKB-228ENST00000523517 TBC1D2BQ9UPU7 963 aa20.72■□□□□ 0.91
IKBKB-228ENST00000523517 B4E1Z4 1266 aa20.71■□□□□ 0.91
IKBKB-228ENST00000523517 RXRAP19793 462 aa20.71■□□□□ 0.91
IKBKB-228ENST00000523517 CDC27P30260 824 aa20.71■□□□□ 0.91
IKBKB-228ENST00000523517 PHKA1P46020 1223 aa20.71■□□□□ 0.91
IKBKB-228ENST00000523517 TPM4P67936 248 aa20.71■□□□□ 0.91
IKBKB-228ENST00000523517 TMEM87BQ96K49 555 aa20.71■□□□□ 0.91
IKBKB-228ENST00000523517 TIGD1Q96MW7 591 aa20.71■□□□□ 0.91
IKBKB-228ENST00000523517 XPO4Q9C0E2 1151 aaKnown RBP20.71■□□□□ 0.91
IKBKB-228ENST00000523517 SENP2Q9HC62 589 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms