RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 QSER1Q2KHR3 1735 aa24.68■■□□□ 1.54
SQLE-206ENST00000523430 DTNBO60941 627 aa24.68■■□□□ 1.54
SQLE-206ENST00000523430 BBOX1O75936 387 aa24.68■■□□□ 1.54
SQLE-206ENST00000523430 UFL1O94874 794 aa24.68■■□□□ 1.54
SQLE-206ENST00000523430 ZNF384Q8TF68 577 aa24.68■■□□□ 1.54
SQLE-206ENST00000523430 ZNF213O14771 459 aa24.67■■□□□ 1.54
SQLE-206ENST00000523430 GBP4Q96PP9 640 aa24.67■■□□□ 1.54
SQLE-206ENST00000523430 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.67■■□□□ 1.54
SQLE-206ENST00000523430 PPEF1O14829 653 aaPredicted RBP24.66■■□□□ 1.54
SQLE-206ENST00000523430 PRKAB2O43741 272 aa24.66■■□□□ 1.54
SQLE-206ENST00000523430 EXOSC10Q01780 885 aaKnown RBP24.66■■□□□ 1.54
SQLE-206ENST00000523430 SRGNP10124 158 aa24.66■■□□□ 1.54
SQLE-206ENST00000523430 CHST3Q7LGC8 479 aa24.66■■□□□ 1.54
SQLE-206ENST00000523430 TBC1D10CQ8IV04 446 aa24.66■■□□□ 1.54
SQLE-206ENST00000523430 BRF1Q92994 677 aa24.66■■□□□ 1.54
SQLE-206ENST00000523430 STK32BQ9NY57 414 aa24.66■■□□□ 1.54
SQLE-206ENST00000523430 ZMYM6O95789 1325 aa24.66■■□□□ 1.54
SQLE-206ENST00000523430 PATL2C9JE40 543 aaKnown RBP24.65■■□□□ 1.54
SQLE-206ENST00000523430 GGA1Q9UJY5 639 aa24.65■■□□□ 1.54
SQLE-206ENST00000523430 TIAM2Q8IVF5 1701 aa24.65■■□□□ 1.54
SQLE-206ENST00000523430 GSG1L2A8MUP6 293 aa24.64■■□□□ 1.54
SQLE-206ENST00000523430 STK3Q13188 491 aa24.64■■□□□ 1.54
SQLE-206ENST00000523430 FOXD4L5Q5VV16 416 aaPredicted RBP24.64■■□□□ 1.54
SQLE-206ENST00000523430 C15orf52Q6ZUT6 534 aaKnown RBP24.64■■□□□ 1.54
SQLE-206ENST00000523430 IFNL3Q8IZI9 196 aa24.64■■□□□ 1.54
SQLE-206ENST00000523430 FOXD4L4Q8WXT5 416 aaPredicted RBP24.64■■□□□ 1.54
SQLE-206ENST00000523430 SMC3Q9UQE7 1217 aa24.64■■□□□ 1.54
SQLE-206ENST00000523430 BRD1O95696 1058 aa24.64■■□□□ 1.53
SQLE-206ENST00000523430 ATP2B4P23634 1241 aa24.64■■□□□ 1.53
SQLE-206ENST00000523430 PRDX5P30044 214 aa24.64■■□□□ 1.53
SQLE-206ENST00000523430 NAA16Q6N069 864 aaPredicted RBP24.64■■□□□ 1.53
SQLE-206ENST00000523430 SLC4A4Q9Y6R1 1079 aa24.64■■□□□ 1.53
SQLE-206ENST00000523430 DDX11L8A8MPP1 907 aa24.63■■□□□ 1.53
SQLE-206ENST00000523430 ZBTB22O15209 634 aa24.63■■□□□ 1.53
SQLE-206ENST00000523430 BAG4O95429 457 aaKnown RBP24.63■■□□□ 1.53
SQLE-206ENST00000523430 FGD1P98174 961 aa24.63■■□□□ 1.53
SQLE-206ENST00000523430 ALX1Q15699 326 aa24.63■■□□□ 1.53
SQLE-206ENST00000523430 CLEC17AQ6ZS10 378 aa24.63■■□□□ 1.53
SQLE-206ENST00000523430 ZNF804AQ7Z570 1209 aa24.63■■□□□ 1.53
SQLE-206ENST00000523430 MB21D2Q8IYB1 491 aaPredicted RBP24.63■■□□□ 1.53
SQLE-206ENST00000523430 NSUN4Q96CB9 384 aaKnown RBP24.63■■□□□ 1.53
SQLE-206ENST00000523430 RIOK1Q9BRS2 568 aaKnown RBP24.63■■□□□ 1.53
SQLE-206ENST00000523430 NAPBQ9H115 298 aa24.63■■□□□ 1.53
SQLE-206ENST00000523430 PODXL2Q9NZ53 605 aa24.63■■□□□ 1.53
SQLE-206ENST00000523430 MAGEB6P1A0A0J9YX57 407 aa24.62■■□□□ 1.53
SQLE-206ENST00000523430 NPR1P16066 1061 aa24.62■■□□□ 1.53
SQLE-206ENST00000523430 GNAT2P19087 354 aa24.62■■□□□ 1.53
SQLE-206ENST00000523430 MECOMQ03112 1051 aa24.62■■□□□ 1.53
SQLE-206ENST00000523430 TDRD7Q8NHU6 1098 aaKnown RBP24.62■■□□□ 1.53
SQLE-206ENST00000523430 TBC1D16Q8TBP0 767 aa24.62■■□□□ 1.53
SQLE-206ENST00000523430 AGXT2Q9BYV1 514 aa24.62■■□□□ 1.53
SQLE-206ENST00000523430 POLLQ9UGP5 575 aa24.62■■□□□ 1.53
SQLE-206ENST00000523430 DUOX1Q9NRD9 1551 aa24.62■■□□□ 1.53
SQLE-206ENST00000523430 GJB2P29033 226 aa24.62■■□□□ 1.53
SQLE-206ENST00000523430 PDE6BP35913 854 aa24.62■■□□□ 1.53
SQLE-206ENST00000523430 DEFB132Q7Z7B7 95 aa24.62■■□□□ 1.53
SQLE-206ENST00000523430 TMC4Q7Z404 712 aa24.61■■□□□ 1.53
SQLE-206ENST00000523430 NCOA7Q8NI08 942 aa24.61■■□□□ 1.53
SQLE-206ENST00000523430 NKX2-3Q8TAU0 364 aa24.61■■□□□ 1.53
SQLE-206ENST00000523430 ANTXR2P58335 489 aa24.6■■□□□ 1.53
SQLE-206ENST00000523430 DYNLL1P63167 89 aaKnown RBP24.6■■□□□ 1.53
SQLE-206ENST00000523430 APOBRQ0VD83 1088 aa24.6■■□□□ 1.53
SQLE-206ENST00000523430 OLFM4Q6UX06 510 aa24.6■■□□□ 1.53
SQLE-206ENST00000523430 RALYLQ86SE5 291 aaKnown RBP24.6■■□□□ 1.53
SQLE-206ENST00000523430 SDR42E1Q8WUS8 393 aa24.6■■□□□ 1.53
SQLE-206ENST00000523430 GTF3C6Q969F1 213 aa24.6■■□□□ 1.53
SQLE-206ENST00000523430 ATP6V0A2Q9Y487 856 aa24.6■■□□□ 1.53
SQLE-206ENST00000523430 NEDD4P46934 1319 aa24.6■■□□□ 1.53
SQLE-206ENST00000523430 TDO2P48775 406 aa24.6■■□□□ 1.53
SQLE-206ENST00000523430 SP8Q8IXZ3 490 aa24.6■■□□□ 1.53
SQLE-206ENST00000523430 GPHNQ9NQX3 736 aaPredicted RBP24.6■■□□□ 1.53
SQLE-206ENST00000523430 KIAA1551Q9HCM1 1747 aa24.59■■□□□ 1.53
SQLE-206ENST00000523430 SALL1Q9NSC2 1324 aa24.59■■□□□ 1.53
SQLE-206ENST00000523430 CHAMP1Q96JM3 812 aa24.59■■□□□ 1.53
SQLE-206ENST00000523430 CCDC88AQ3V6T2 1871 aa24.59■■□□□ 1.53
SQLE-206ENST00000523430 CHD4Q14839 1912 aa24.58■■□□□ 1.53
SQLE-206ENST00000523430 PRC1O43663 620 aa24.58■■□□□ 1.53
SQLE-206ENST00000523430 NACAP1Q9BZK3 213 aa24.58■■□□□ 1.53
SQLE-206ENST00000523430 MCM5P33992 734 aa24.58■■□□□ 1.52
SQLE-206ENST00000523430 BAG6P46379 1132 aa24.58■■□□□ 1.52
SQLE-206ENST00000523430 CTDSPL2Q05D32 466 aa24.58■■□□□ 1.52
SQLE-206ENST00000523430 SF3B2Q13435 895 aaKnown RBP24.58■■□□□ 1.52
SQLE-206ENST00000523430 MASTLQ96GX5 879 aa24.58■■□□□ 1.52
SQLE-206ENST00000523430 PDGFDQ9GZP0 370 aaPredicted RBP24.58■■□□□ 1.52
SQLE-206ENST00000523430 CD209Q9NNX6 404 aa24.58■■□□□ 1.52
SQLE-206ENST00000523430 C6orf229H3BNL8 230 aa24.57■■□□□ 1.52
SQLE-206ENST00000523430 SYT1P21579 422 aa24.57■■□□□ 1.52
SQLE-206ENST00000523430 SCRN1Q12765 414 aa24.57■■□□□ 1.52
SQLE-206ENST00000523430 WDR66Q8TBY9 1149 aa24.57■■□□□ 1.52
SQLE-206ENST00000523430 TACC3Q9Y6A5 838 aa24.57■■□□□ 1.52
SQLE-206ENST00000523430 WDR33Q9C0J8 1336 aaKnown RBP24.56■■□□□ 1.52
SQLE-206ENST00000523430 GRIK5Q16478 980 aa24.56■■□□□ 1.52
SQLE-206ENST00000523430 DZIP1Q86YF9 867 aaKnown RBP24.56■■□□□ 1.52
SQLE-206ENST00000523430 FBXL16Q8N461 479 aa24.56■■□□□ 1.52
SQLE-206ENST00000523430 INCENPQ9NQS7 918 aa24.56■■□□□ 1.52
SQLE-206ENST00000523430 IL1R1P14778 569 aa24.55■■□□□ 1.52
SQLE-206ENST00000523430 TRDNQ13061 729 aa24.55■■□□□ 1.52
SQLE-206ENST00000523430 AATFQ9NY61 560 aaKnown RBP eCLIP24.55■■□□□ 1.52
SQLE-206ENST00000523430 STX6O43752 255 aa24.55■■□□□ 1.52
SQLE-206ENST00000523430 PFKFB2O60825 505 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms