RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 KCNH3Q9ULD8 1083 aa10.32□□□□□ -0.76
CSMD1-212ENST00000523387 PLEKHG3A1L390 1219 aa10.32□□□□□ -0.76
CSMD1-212ENST00000523387 GOLGA8AA7E2F4 631 aa10.32□□□□□ -0.76
CSMD1-212ENST00000523387 CMA1P23946 247 aa10.32□□□□□ -0.76
CSMD1-212ENST00000523387 HSP90AB3PQ58FF7 597 aa10.32□□□□□ -0.76
CSMD1-212ENST00000523387 LMBR1LQ6UX01 489 aa10.32□□□□□ -0.76
CSMD1-212ENST00000523387 KIAA1328Q86T90 577 aa10.32□□□□□ -0.76
CSMD1-212ENST00000523387 FBXO18Q8NFZ0 1043 aa10.32□□□□□ -0.76
CSMD1-212ENST00000523387 FAM107BQ9H098 131 aa10.32□□□□□ -0.76
CSMD1-212ENST00000523387 ARHGEF28Q8N1W1 1705 aaKnown RBP10.31□□□□□ -0.76
CSMD1-212ENST00000523387 CCDC151A5D8V7 595 aa10.31□□□□□ -0.76
CSMD1-212ENST00000523387 IKBKBO14920 756 aa10.31□□□□□ -0.76
CSMD1-212ENST00000523387 TIMM10P62072 90 aa10.31□□□□□ -0.76
CSMD1-212ENST00000523387 PIP4K2BP78356 416 aa10.31□□□□□ -0.76
CSMD1-212ENST00000523387 AMOTQ4VCS5 1084 aa10.31□□□□□ -0.76
CSMD1-212ENST00000523387 FCHSD1Q86WN1 690 aa10.31□□□□□ -0.76
CSMD1-212ENST00000523387 PPLO60437 1756 aa10.31□□□□□ -0.76
CSMD1-212ENST00000523387 MAP2P11137 1827 aaKnown RBP10.31□□□□□ -0.76
CSMD1-212ENST00000523387 ANKRD65E5RJM6 399 aa10.31□□□□□ -0.76
CSMD1-212ENST00000523387 AFMP43652 599 aa10.31□□□□□ -0.76
CSMD1-212ENST00000523387 AKAP4Q5JQC9 854 aa10.31□□□□□ -0.76
CSMD1-212ENST00000523387 ANKRD13DQ6ZTN6 518 aa10.31□□□□□ -0.76
CSMD1-212ENST00000523387 IGSF22Q8N9C0 903 aa10.31□□□□□ -0.76
CSMD1-212ENST00000523387 NUP133Q8WUM0 1156 aa10.31□□□□□ -0.76
CSMD1-212ENST00000523387 PPM1EQ8WY54 764 aa10.31□□□□□ -0.76
CSMD1-212ENST00000523387 LRRC59Q96AG4 307 aaKnown RBP10.31□□□□□ -0.76
CSMD1-212ENST00000523387 SLC26A6Q9BXS9 759 aa10.31□□□□□ -0.76
CSMD1-212ENST00000523387 EFCC1Q9HA90 598 aa10.31□□□□□ -0.76
CSMD1-212ENST00000523387 DBNLQ9UJU6 430 aaKnown RBP10.31□□□□□ -0.76
CSMD1-212ENST00000523387 FAN1Q9Y2M0 1017 aa10.31□□□□□ -0.76
CSMD1-212ENST00000523387 USP42Q9H9J4 1324 aaKnown RBP10.31□□□□□ -0.76
CSMD1-212ENST00000523387 CARMIL3Q8ND23 1372 aa10.31□□□□□ -0.76
CSMD1-212ENST00000523387 N4BP3O15049 544 aa10.31□□□□□ -0.76
CSMD1-212ENST00000523387 ZNF274Q96GC6 653 aaPredicted RBP10.31□□□□□ -0.76
CSMD1-212ENST00000523387 KNDC1Q76NI1 1749 aa10.3□□□□□ -0.76
CSMD1-212ENST00000523387 MLH3Q9UHC1 1453 aa10.3□□□□□ -0.76
CSMD1-212ENST00000523387 A0A0G2JS52 829 aa10.3□□□□□ -0.76
CSMD1-212ENST00000523387 TMEM232C9JQI7 657 aa10.3□□□□□ -0.76
CSMD1-212ENST00000523387 MCM3P25205 808 aa10.3□□□□□ -0.76
CSMD1-212ENST00000523387 VSTM4Q8IW00 320 aa10.3□□□□□ -0.76
CSMD1-212ENST00000523387 OSCARQ8IYS5 282 aa10.3□□□□□ -0.76
CSMD1-212ENST00000523387 KCNB2Q92953 911 aa10.3□□□□□ -0.76
CSMD1-212ENST00000523387 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.3□□□□□ -0.763e-7■■■■□ 22.2
CSMD1-212ENST00000523387 DDX21Q9NR30 783 aaKnown RBP eCLIP10.3□□□□□ -0.76
CSMD1-212ENST00000523387 HELLSQ9NRZ9 838 aa10.3□□□□□ -0.76
CSMD1-212ENST00000523387 RNF113AO15541 343 aaKnown RBP10.3□□□□□ -0.76
CSMD1-212ENST00000523387 STX10O60499 249 aa10.3□□□□□ -0.76
CSMD1-212ENST00000523387 NAP1L1P55209 391 aaKnown RBP10.3□□□□□ -0.76
CSMD1-212ENST00000523387 SART3Q15020 963 aaKnown RBP10.3□□□□□ -0.76
CSMD1-212ENST00000523387 AFAP1L1Q8TED9 768 aa10.3□□□□□ -0.76
CSMD1-212ENST00000523387 WDR24Q96S15 920 aa10.3□□□□□ -0.76
CSMD1-212ENST00000523387 ZNHIT6Q9NWK9 470 aaKnown RBP10.3□□□□□ -0.76
CSMD1-212ENST00000523387 IDH1O75874 414 aaKnown RBP10.3□□□□□ -0.76
CSMD1-212ENST00000523387 XBP1P17861 261 aa10.3□□□□□ -0.76
CSMD1-212ENST00000523387 IBSPP21815 317 aaPredicted RBP10.3□□□□□ -0.76
CSMD1-212ENST00000523387 COL9A3Q14050 684 aaPredicted RBP10.3□□□□□ -0.76
CSMD1-212ENST00000523387 ZNF827Q17R98 1081 aa10.3□□□□□ -0.76
CSMD1-212ENST00000523387 SRGAP1Q7Z6B7 1085 aa10.3□□□□□ -0.76
CSMD1-212ENST00000523387 CLIC6Q96NY7 704 aa10.3□□□□□ -0.76
CSMD1-212ENST00000523387 RABEP2Q9H5N1 569 aa10.3□□□□□ -0.76
CSMD1-212ENST00000523387 GJB4Q9NTQ9 266 aa10.3□□□□□ -0.76
CSMD1-212ENST00000523387 MKRN1Q9UHC7 482 aaKnown RBP10.3□□□□□ -0.76
CSMD1-212ENST00000523387 PCDHA5Q9Y5H7 936 aa10.3□□□□□ -0.76
CSMD1-212ENST00000523387 CHD1O14646 1710 aa10.29□□□□□ -0.76
CSMD1-212ENST00000523387 KDRP35968 1356 aa10.29□□□□□ -0.76
CSMD1-212ENST00000523387 CCDC57Q2TAC2 916 aa10.29□□□□□ -0.76
CSMD1-212ENST00000523387 DNAJC21Q5F1R6 531 aaKnown RBP10.29□□□□□ -0.76
CSMD1-212ENST00000523387 SMARCC2Q8TAQ2 1214 aa10.29□□□□□ -0.76
CSMD1-212ENST00000523387 WASF1Q92558 559 aa10.29□□□□□ -0.76
CSMD1-212ENST00000523387 DPF2Q92785 391 aa10.29□□□□□ -0.76
CSMD1-212ENST00000523387 NAPGQ99747 312 aaPredicted RBP10.29□□□□□ -0.76
CSMD1-212ENST00000523387 ALDH8A1Q9H2A2 487 aaPredicted RBP10.29□□□□□ -0.76
CSMD1-212ENST00000523387 CENPHQ9H3R5 247 aa10.29□□□□□ -0.76
CSMD1-212ENST00000523387 POLR3EQ9NVU0 708 aa10.29□□□□□ -0.76
CSMD1-212ENST00000523387 GUCA1BQ9UMX6 200 aa10.29□□□□□ -0.76
CSMD1-212ENST00000523387 CPS1P31327 1500 aa10.29□□□□□ -0.76
CSMD1-212ENST00000523387 TUBB4BP68371 445 aa10.29□□□□□ -0.76
CSMD1-212ENST00000523387 SSRP1Q08945 709 aaKnown RBP10.29□□□□□ -0.76
CSMD1-212ENST00000523387 KRI1Q8N9T8 703 aaKnown RBP10.29□□□□□ -0.76
CSMD1-212ENST00000523387 ENGASEQ8NFI3 743 aa10.29□□□□□ -0.76
CSMD1-212ENST00000523387 CAPZA3Q96KX2 299 aa10.29□□□□□ -0.76
CSMD1-212ENST00000523387 GDAP1L1Q96MZ0 367 aa10.29□□□□□ -0.76
CSMD1-212ENST00000523387 PLEKHA4Q9H4M7 779 aa10.29□□□□□ -0.76
CSMD1-212ENST00000523387 TBC1D2BQ9UPU7 963 aa10.29□□□□□ -0.76
CSMD1-212ENST00000523387 ALKQ9UM73 1620 aa10.29□□□□□ -0.76
CSMD1-212ENST00000523387 EBAG9O00559 213 aa10.29□□□□□ -0.76
CSMD1-212ENST00000523387 TBC1D8O95759 1140 aa10.29□□□□□ -0.76
CSMD1-212ENST00000523387 KCNJ6P48051 423 aa10.29□□□□□ -0.76
CSMD1-212ENST00000523387 ESCO1Q5FWF5 840 aa10.29□□□□□ -0.76
CSMD1-212ENST00000523387 VPS37DQ86XT2 251 aa10.29□□□□□ -0.76
CSMD1-212ENST00000523387 DSCC1Q9BVC3 393 aa10.29□□□□□ -0.76
CSMD1-212ENST00000523387 GPHNQ9NQX3 736 aaPredicted RBP10.29□□□□□ -0.76
CSMD1-212ENST00000523387 CEP131Q9UPN4 1083 aa10.29□□□□□ -0.76
CSMD1-212ENST00000523387 HSPD1P10809 573 aaKnown RBP10.28□□□□□ -0.76
CSMD1-212ENST00000523387 LONRF3Q496Y0 759 aa10.28□□□□□ -0.76
CSMD1-212ENST00000523387 WWC2Q6AWC2 1192 aa10.28□□□□□ -0.76
CSMD1-212ENST00000523387 CYB5RLQ6IPT4 315 aa10.28□□□□□ -0.76
CSMD1-212ENST00000523387 PAXIP1Q6ZW49 1069 aaPredicted RBP10.28□□□□□ -0.76
CSMD1-212ENST00000523387 MAGEC2Q9UBF1 373 aaPredicted RBP10.28□□□□□ -0.76
CSMD1-212ENST00000523387 SLC12A7Q9Y666 1083 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms