RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 KIAA1551Q9HCM1 1747 aa9.59□□□□□ -0.87
SDCBP-210ENST00000522843 ATXN7O15265 892 aaPredicted RBP9.59□□□□□ -0.87
SDCBP-210ENST00000522843 PSMG3-AS1Q96PY0 264 aa9.59□□□□□ -0.87
SDCBP-210ENST00000522843 AVENQ9NQS1 362 aaPredicted RBP9.59□□□□□ -0.87
SDCBP-210ENST00000522843 RAB3GAP2Q9H2M9 1393 aa9.59□□□□□ -0.87
SDCBP-210ENST00000522843 TAF1LQ8IZX4 1826 aa9.59□□□□□ -0.88
SDCBP-210ENST00000522843 FAM208AQ9UK61 1670 aaKnown RBP9.58□□□□□ -0.88
SDCBP-210ENST00000522843 ITGB7P26010 798 aa9.58□□□□□ -0.88
SDCBP-210ENST00000522843 DOC2BQ14184 412 aa9.58□□□□□ -0.88
SDCBP-210ENST00000522843 SLFNL1Q499Z3 407 aa9.58□□□□□ -0.88
SDCBP-210ENST00000522843 AIDAQ96BJ3 306 aa9.58□□□□□ -0.88
SDCBP-210ENST00000522843 NIFKQ9BYG3 293 aaKnown RBP9.58□□□□□ -0.88
SDCBP-210ENST00000522843 SEMA6BQ9H3T3 888 aa9.58□□□□□ -0.88
SDCBP-210ENST00000522843 KLF15Q9UIH9 416 aa9.58□□□□□ -0.88
SDCBP-210ENST00000522843 MON2Q7Z3U7 1717 aa9.58□□□□□ -0.88
SDCBP-210ENST00000522843 INHAP05111 366 aa9.57□□□□□ -0.88
SDCBP-210ENST00000522843 MAPTP10636 758 aaKnown RBP9.57□□□□□ -0.88
SDCBP-210ENST00000522843 ATP4AP20648 1035 aa9.57□□□□□ -0.88
SDCBP-210ENST00000522843 EIF4G2P78344 907 aaKnown RBP eCLIP9.57□□□□□ -0.88
SDCBP-210ENST00000522843 TNP2Q05952 138 aa9.57□□□□□ -0.88
SDCBP-210ENST00000522843 NME9Q86XW9 330 aa9.57□□□□□ -0.88
SDCBP-210ENST00000522843 KTN1Q86UP2 1357 aaKnown RBP9.57□□□□□ -0.88
SDCBP-210ENST00000522843 MEGF6O75095 1541 aa9.56□□□□□ -0.88
SDCBP-210ENST00000522843 UBR3Q6ZT12 1888 aa9.56□□□□□ -0.88
SDCBP-210ENST00000522843 PXDNLA1KZ92 1463 aa9.56□□□□□ -0.88
SDCBP-210ENST00000522843 CD163L1Q9NR16 1453 aa9.56□□□□□ -0.88
SDCBP-210ENST00000522843 SBNO2Q9Y2G9 1366 aa9.56□□□□□ -0.88
SDCBP-210ENST00000522843 A0A1W2PNR3 127 aa9.56□□□□□ -0.88
SDCBP-210ENST00000522843 FCHSD1Q86WN1 690 aa9.56□□□□□ -0.88
SDCBP-210ENST00000522843 USP47Q96K76 1375 aa9.55□□□□□ -0.88
SDCBP-210ENST00000522843 CD33P20138 364 aa9.55□□□□□ -0.88
SDCBP-210ENST00000522843 SCNN1DP51172 638 aa9.55□□□□□ -0.88
SDCBP-210ENST00000522843 OXLD1Q5BKU9 147 aa9.55□□□□□ -0.88
SDCBP-210ENST00000522843 ARSJQ5FYB0 599 aaPredicted RBP9.55□□□□□ -0.88
SDCBP-210ENST00000522843 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.55□□□□□ -0.88
SDCBP-210ENST00000522843 HCN2Q9UL51 889 aa9.55□□□□□ -0.88
SDCBP-210ENST00000522843 C4BP0C0L5 1744 aa9.55□□□□□ -0.88
SDCBP-210ENST00000522843 RGPD2P0DJD1 1756 aa9.55□□□□□ -0.88
SDCBP-210ENST00000522843 EVC2Q86UK5 1308 aa9.55□□□□□ -0.88
SDCBP-210ENST00000522843 KIF13BQ9NQT8 1826 aa9.54□□□□□ -0.88
SDCBP-210ENST00000522843 DCDC2BA2VCK2 349 aa9.54□□□□□ -0.88
SDCBP-210ENST00000522843 HSPA1AP0DMV8 641 aaKnown RBP9.54□□□□□ -0.88
SDCBP-210ENST00000522843 HSPA1BP0DMV9 641 aaKnown RBP9.54□□□□□ -0.88
SDCBP-210ENST00000522843 GATA4P43694 442 aa9.54□□□□□ -0.88
SDCBP-210ENST00000522843 GDF10P55107 478 aa9.54□□□□□ -0.88
SDCBP-210ENST00000522843 FLAD1Q8NFF5 587 aa9.54□□□□□ -0.88
SDCBP-210ENST00000522843 ZCRB1Q8TBF4 217 aaKnown RBP9.54□□□□□ -0.88
SDCBP-210ENST00000522843 TRIM11Q96F44 468 aa9.54□□□□□ -0.88
SDCBP-210ENST00000522843 LTV1Q96GA3 475 aaPredicted RBP9.54□□□□□ -0.88
SDCBP-210ENST00000522843 PLVAPQ9BX97 442 aa9.54□□□□□ -0.88
SDCBP-210ENST00000522843 TBC1D2BQ9UPU7 963 aa9.54□□□□□ -0.88
SDCBP-210ENST00000522843 N4BP2Q86UW6 1770 aaPredicted RBP9.54□□□□□ -0.88
SDCBP-210ENST00000522843 KHNYNO15037 678 aaKnown RBP9.53□□□□□ -0.88
SDCBP-210ENST00000522843 SMTNP53814 917 aa9.53□□□□□ -0.88
SDCBP-210ENST00000522843 FSTL1Q12841 308 aa9.53□□□□□ -0.88
SDCBP-210ENST00000522843 IP6K1Q92551 441 aa9.53□□□□□ -0.88
SDCBP-210ENST00000522843 PALLDQ8WX93 1383 aa9.52□□□□□ -0.88
SDCBP-210ENST00000522843 KCPQ6ZWJ8 1503 aa9.52□□□□□ -0.88
SDCBP-210ENST00000522843 SPATA31C1P0DKV0 1188 aa9.52□□□□□ -0.89
SDCBP-210ENST00000522843 ZMYM1Q5SVZ6 1142 aa9.52□□□□□ -0.89
SDCBP-210ENST00000522843 BRCA1P38398 1863 aaKnown RBP9.51□□□□□ -0.89
SDCBP-210ENST00000522843 A0A0G2JLW4 131 aa9.51□□□□□ -0.89
SDCBP-210ENST00000522843 PCBP4P57723 403 aaKnown RBP9.51□□□□□ -0.89
SDCBP-210ENST00000522843 ZNF468Q5VIY5 522 aaPredicted RBP9.51□□□□□ -0.89
SDCBP-210ENST00000522843 PRR12Q9ULL5 1215 aa9.51□□□□□ -0.89
SDCBP-210ENST00000522843 BCS1LQ9Y276 419 aa9.51□□□□□ -0.89
SDCBP-210ENST00000522843 MAP2P11137 1827 aaKnown RBP9.51□□□□□ -0.89
SDCBP-210ENST00000522843 PKD1L3Q7Z443 1732 aa9.51□□□□□ -0.89
SDCBP-210ENST00000522843 C10orf71Q711Q0 1435 aa9.5□□□□□ -0.89
SDCBP-210ENST00000522843 TATP17735 454 aaPredicted RBP9.5□□□□□ -0.89
SDCBP-210ENST00000522843 FBLN1P23142 703 aa9.5□□□□□ -0.89
SDCBP-210ENST00000522843 C9orf131Q5VYM1 1079 aa9.5□□□□□ -0.89
SDCBP-210ENST00000522843 ARHGAP27Q6ZUM4 889 aa9.5□□□□□ -0.89
SDCBP-210ENST00000522843 ZIC5Q96T25 663 aa9.5□□□□□ -0.89
SDCBP-210ENST00000522843 KRTAP9-2Q9BYQ4 174 aa9.5□□□□□ -0.89
SDCBP-210ENST00000522843 PRM3Q9NNZ6 103 aa9.5□□□□□ -0.89
SDCBP-210ENST00000522843 ZDHHC3Q9NYG2 299 aa9.5□□□□□ -0.89
SDCBP-210ENST00000522843 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.49□□□□□ -0.89
SDCBP-210ENST00000522843 CDK2AP1O14519 115 aa9.49□□□□□ -0.89
SDCBP-210ENST00000522843 MMP10P09238 476 aa9.49□□□□□ -0.89
SDCBP-210ENST00000522843 FAM157BP0CG42 384 aa9.49□□□□□ -0.89
SDCBP-210ENST00000522843 KCNA3P22001 575 aa9.49□□□□□ -0.89
SDCBP-210ENST00000522843 HOXC9P31274 260 aa9.49□□□□□ -0.89
SDCBP-210ENST00000522843 IRF5Q13568 498 aa9.49□□□□□ -0.89
SDCBP-210ENST00000522843 MAP7D1Q3KQU3 841 aa9.49□□□□□ -0.89
SDCBP-210ENST00000522843 ZNF295-AS1Q8N0V1 137 aa9.49□□□□□ -0.89
SDCBP-210ENST00000522843 LINC00116Q8NCU8 138 aa9.49□□□□□ -0.89
SDCBP-210ENST00000522843 SLC4A9Q96Q91 983 aa9.49□□□□□ -0.89
SDCBP-210ENST00000522843 GJA3Q9Y6H8 435 aa9.49□□□□□ -0.89
SDCBP-210ENST00000522843 MAP3K19Q56UN5 1328 aa9.49□□□□□ -0.89
SDCBP-210ENST00000522843 ITGB4P16144 1822 aa9.48□□□□□ -0.89
SDCBP-210ENST00000522843 DPEP1P16444 411 aa9.48□□□□□ -0.89
SDCBP-210ENST00000522843 SSFA2P28290 1259 aa9.48□□□□□ -0.89
SDCBP-210ENST00000522843 TGFB2P61812 414 aa9.48□□□□□ -0.89
SDCBP-210ENST00000522843 NBPF6Q5VWK0 638 aa9.48□□□□□ -0.89
SDCBP-210ENST00000522843 MPRIPQ6WCQ1 1025 aa9.48□□□□□ -0.89
SDCBP-210ENST00000522843 C16orf71Q8IYS4 520 aaPredicted RBP9.48□□□□□ -0.89
SDCBP-210ENST00000522843 USHBP1Q8N6Y0 703 aa9.48□□□□□ -0.89
SDCBP-210ENST00000522843 NBPF4Q96M43 638 aa9.48□□□□□ -0.89
SDCBP-210ENST00000522843 MARK1Q9P0L2 795 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms