RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	GOLGA6L10	A0A0M3HER8	536 aa		11.69	□□□□□ -0.54
TCF7-223	ENST00000522653	URI1	O94763	535 aa	Predicted RBP	11.69	□□□□□ -0.54
TCF7-223	ENST00000522653	ENOX2	Q16206	610 aa	Known RBP	11.69	□□□□□ -0.54
TCF7-223	ENST00000522653	FAM47C	Q5HY64	1035 aa		11.69	□□□□□ -0.54
TCF7-223	ENST00000522653	ZBTB33	Q86T24	672 aa		11.69	□□□□□ -0.54
TCF7-223	ENST00000522653	CCDC83	Q8IWF9	413 aa		11.69	□□□□□ -0.54
TCF7-223	ENST00000522653	SMC5	Q8IY18	1101 aa		11.69	□□□□□ -0.54
TCF7-223	ENST00000522653	SEPT12	Q8IYM1	358 aa		11.69	□□□□□ -0.54
TCF7-223	ENST00000522653	PPM1E	Q8WY54	764 aa		11.69	□□□□□ -0.54
TCF7-223	ENST00000522653	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.69	□□□□□ -0.54
TCF7-223	ENST00000522653	EXOC1	Q9NV70	894 aa		11.69	□□□□□ -0.54
TCF7-223	ENST00000522653	COPB2	P35606	906 aa		11.69	□□□□□ -0.54
TCF7-223	ENST00000522653	MAP9	Q49MG5	647 aa		11.69	□□□□□ -0.54
TCF7-223	ENST00000522653	CRACR2A	Q9BSW2	395 aa		11.69	□□□□□ -0.54
TCF7-223	ENST00000522653	CENPH	Q9H3R5	247 aa		11.69	□□□□□ -0.54
TCF7-223	ENST00000522653	DPP9	Q86TI2	863 aa		11.68	□□□□□ -0.54
TCF7-223	ENST00000522653	BBOX1	O75936	387 aa		11.68	□□□□□ -0.54
TCF7-223	ENST00000522653	MCM3	P25205	808 aa		11.68	□□□□□ -0.54
TCF7-223	ENST00000522653	TMOD1	P28289	359 aa		11.68	□□□□□ -0.54
TCF7-223	ENST00000522653	NUTM1	Q86Y26	1132 aa		11.68	□□□□□ -0.54
TCF7-223	ENST00000522653	COA7	Q96BR5	231 aa		11.68	□□□□□ -0.54
TCF7-223	ENST00000522653	SLC10A4	Q96EP9	437 aa		11.68	□□□□□ -0.54
TCF7-223	ENST00000522653	ADD3	Q9UEY8	706 aa	Known RBP	11.68	□□□□□ -0.54
TCF7-223	ENST00000522653	RTN1	Q16799	776 aa		11.68	□□□□□ -0.54
TCF7-223	ENST00000522653	MYRIP	Q8NFW9	859 aa		11.68	□□□□□ -0.54
TCF7-223	ENST00000522653	LBHD1	Q9BQE6	289 aa	Predicted RBP	11.68	□□□□□ -0.54
TCF7-223	ENST00000522653	CAVIN2	O95810	425 aa		11.68	□□□□□ -0.54
TCF7-223	ENST00000522653	ADRA2B	P18089	450 aa		11.68	□□□□□ -0.54
TCF7-223	ENST00000522653	SLC4A8	Q2Y0W8	1093 aa		11.68	□□□□□ -0.54
TCF7-223	ENST00000522653	TTLL6	Q8N841	843 aa		11.68	□□□□□ -0.54
TCF7-223	ENST00000522653	RASSF4	Q9H2L5	321 aa		11.68	□□□□□ -0.54
TCF7-223	ENST00000522653	PLEKHG1	Q9ULL1	1385 aa		11.68	□□□□□ -0.54
TCF7-223	ENST00000522653	DNMT1	P26358	1616 aa	Known RBP	11.68	□□□□□ -0.54
TCF7-223	ENST00000522653	HAUS3	Q68CZ6	603 aa		11.67	□□□□□ -0.54
TCF7-223	ENST00000522653	LMBR1L	Q6UX01	489 aa		11.67	□□□□□ -0.54
TCF7-223	ENST00000522653	MIS18A	Q9NYP9	233 aa		11.67	□□□□□ -0.54
TCF7-223	ENST00000522653	FMNL1	O95466	1100 aa	Predicted RBP	11.67	□□□□□ -0.54
TCF7-223	ENST00000522653	PPP2R5B	Q15173	497 aa		11.67	□□□□□ -0.54
TCF7-223	ENST00000522653	TCERG1L	Q5VWI1	586 aa		11.67	□□□□□ -0.54
TCF7-223	ENST00000522653	MICALCL	Q6ZW33	695 aa		11.67	□□□□□ -0.54
TCF7-223	ENST00000522653	CARD10	Q9BWT7	1032 aa		11.67	□□□□□ -0.54
TCF7-223	ENST00000522653	CCDC8	Q9H0W5	538 aa	Predicted RBP	11.67	□□□□□ -0.54
TCF7-223	ENST00000522653	IPO4	Q8TEX9	1081 aa	Known RBP	11.67	□□□□□ -0.54
TCF7-223	ENST00000522653	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.67	□□□□□ -0.54
TCF7-223	ENST00000522653	ANO10	Q9NW15	660 aa		11.67	□□□□□ -0.54
TCF7-223	ENST00000522653	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.67	□□□□□ -0.54
TCF7-223	ENST00000522653	ABCA5	Q8WWZ7	1642 aa		11.67	□□□□□ -0.54
TCF7-223	ENST00000522653	ZBTB43	O43298	467 aa		11.67	□□□□□ -0.54
TCF7-223	ENST00000522653	KRT10	P13645	584 aa		11.67	□□□□□ -0.54
TCF7-223	ENST00000522653	RPL13	P26373	211 aa	Known RBP	11.67	□□□□□ -0.54
TCF7-223	ENST00000522653	CASQ1	P31415	396 aa		11.67	□□□□□ -0.54
TCF7-223	ENST00000522653	HEATR3	Q7Z4Q2	680 aa		11.67	□□□□□ -0.54
TCF7-223	ENST00000522653	PLCD4	Q9BRC7	762 aa		11.67	□□□□□ -0.54
TCF7-223	ENST00000522653	IDE	P14735	1019 aa		11.67	□□□□□ -0.54
TCF7-223	ENST00000522653	ZNF569	Q5MCW4	686 aa		11.67	□□□□□ -0.54
TCF7-223	ENST00000522653	FAM160B1	Q5W0V3	765 aa		11.67	□□□□□ -0.54
TCF7-223	ENST00000522653	OTUD6A	Q7L8S5	288 aa		11.67	□□□□□ -0.54
TCF7-223	ENST00000522653	TMEM57	Q8N5G2	664 aa		11.67	□□□□□ -0.54
TCF7-223	ENST00000522653	GCNA	Q96QF7	691 aa		11.67	□□□□□ -0.54
TCF7-223	ENST00000522653	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.66	□□□□□ -0.54
TCF7-223	ENST00000522653	TRIM37	O94972	964 aa		11.66	□□□□□ -0.54
TCF7-223	ENST00000522653	MYZAP	P0CAP1	466 aa		11.66	□□□□□ -0.54
TCF7-223	ENST00000522653	MNAT1	P51948	309 aa		11.66	□□□□□ -0.54
TCF7-223	ENST00000522653	SNW1	Q13573	536 aa	Known RBP	11.66	□□□□□ -0.54
TCF7-223	ENST00000522653	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.66	□□□□□ -0.54
TCF7-223	ENST00000522653	DDX19A	Q9NUU7	478 aa	Known RBP	11.66	□□□□□ -0.54
TCF7-223	ENST00000522653	ATP7A	Q04656	1500 aa		11.66	□□□□□ -0.54
TCF7-223	ENST00000522653	PRAG1	Q86YV5	1406 aa		11.66	□□□□□ -0.54
TCF7-223	ENST00000522653	SRGAP2B	P0DMP2	458 aa		11.66	□□□□□ -0.54
TCF7-223	ENST00000522653	CEBPZ	Q03701	1054 aa	Known RBP	11.66	□□□□□ -0.54
TCF7-223	ENST00000522653	CIAPIN1	Q6FI81	312 aa		11.66	□□□□□ -0.54
TCF7-223	ENST00000522653	INCENP	Q9NQS7	918 aa		11.66	□□□□□ -0.54
TCF7-223	ENST00000522653	EDC4	Q6P2E9	1401 aa	Known RBP	11.66	□□□□□ -0.54
TCF7-223	ENST00000522653	POLR3A	O14802	1390 aa	Predicted RBP	11.66	□□□□□ -0.54
TCF7-223	ENST00000522653	ABCD1	P33897	745 aa		11.66	□□□□□ -0.54
TCF7-223	ENST00000522653	UBE2H	P62256	183 aa		11.66	□□□□□ -0.54
TCF7-223	ENST00000522653	ZNF830	Q96NB3	372 aa	Predicted RBP	11.66	□□□□□ -0.54
TCF7-223	ENST00000522653	KDM6B	O15054	1643 aa		11.66	□□□□□ -0.54
TCF7-223	ENST00000522653	AFF2	P51816	1311 aa		11.66	□□□□□ -0.54
TCF7-223	ENST00000522653	CAMK4	Q16566	473 aa		11.66	□□□□□ -0.54
TCF7-223	ENST00000522653	WDR44	Q5JSH3	913 aa		11.66	□□□□□ -0.54
TCF7-223	ENST00000522653	CEP170	Q5SW79	1584 aa		11.66	□□□□□ -0.54
TCF7-223	ENST00000522653	RTL1	A6NKG5	1358 aa		11.65	□□□□□ -0.54
TCF7-223	ENST00000522653	PPEF1	O14829	653 aa	Predicted RBP	11.65	□□□□□ -0.54
TCF7-223	ENST00000522653	STX10	O60499	249 aa		11.65	□□□□□ -0.54
TCF7-223	ENST00000522653	YEATS4	O95619	227 aa		11.65	□□□□□ -0.54
TCF7-223	ENST00000522653	NPR1	P16066	1061 aa		11.65	□□□□□ -0.54
TCF7-223	ENST00000522653	NFKBIA	P25963	317 aa		11.65	□□□□□ -0.54
TCF7-223	ENST00000522653	MARCKS	P29966	332 aa	Predicted RBP	11.65	□□□□□ -0.54
TCF7-223	ENST00000522653	BSDC1	Q9NW68	430 aa	Predicted RBP	11.65	□□□□□ -0.54
TCF7-223	ENST00000522653	TLR3	O15455	904 aa	Known RBP	11.65	□□□□□ -0.54
TCF7-223	ENST00000522653	MAP4K4	O95819	1239 aa	Predicted RBP	11.65	□□□□□ -0.54
TCF7-223	ENST00000522653	TUBB4A	P04350	444 aa		11.65	□□□□□ -0.54
TCF7-223	ENST00000522653	HCLS1	P14317	486 aa	Predicted RBP	11.65	□□□□□ -0.54
TCF7-223	ENST00000522653	MTIF2	P46199	727 aa	Known RBP	11.65	□□□□□ -0.54
TCF7-223	ENST00000522653	FAM193A	P78312	1265 aa		11.65	□□□□□ -0.54
TCF7-223	ENST00000522653	SLC9C2	Q5TAH2	1124 aa		11.65	□□□□□ -0.54
TCF7-223	ENST00000522653	LEMD3	Q9Y2U8	911 aa		11.65	□□□□□ -0.54
TCF7-223	ENST00000522653	USP16	Q9Y5T5	823 aa		11.65	□□□□□ -0.54
TCF7-223	ENST00000522653	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	11.65	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms