RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 ME3Q16798 604 aa11.48□□□□□ -0.57
SPARC-205ENST00000522348 NAA16Q6N069 864 aaPredicted RBP11.48□□□□□ -0.57
SPARC-205ENST00000522348 Q6ZUG5 572 aa11.48□□□□□ -0.57
SPARC-205ENST00000522348 STOX1Q6ZVD7 989 aa11.48□□□□□ -0.57
SPARC-205ENST00000522348 NCOA7Q8NI08 942 aa11.48□□□□□ -0.57
SPARC-205ENST00000522348 MASTLQ96GX5 879 aa11.48□□□□□ -0.57
SPARC-205ENST00000522348 ARMT1Q9H993 441 aa11.48□□□□□ -0.57
SPARC-205ENST00000522348 ANO8Q9HCE9 1232 aaPredicted RBP11.48□□□□□ -0.57
SPARC-205ENST00000522348 TPCN1Q9ULQ1 816 aa11.48□□□□□ -0.57
SPARC-205ENST00000522348 SMC3Q9UQE7 1217 aa11.48□□□□□ -0.57
SPARC-205ENST00000522348 ATP6V0A2Q9Y487 856 aa11.48□□□□□ -0.57
SPARC-205ENST00000522348 SALL1Q9NSC2 1324 aa11.48□□□□□ -0.57
SPARC-205ENST00000522348 COL4A1P02462 1669 aa11.48□□□□□ -0.57
SPARC-205ENST00000522348 WDR19Q8NEZ3 1342 aa11.47□□□□□ -0.57
SPARC-205ENST00000522348 GSG1L2A8MUP6 293 aa11.47□□□□□ -0.57
SPARC-205ENST00000522348 GOLGA6L22H0YM25 854 aa11.47□□□□□ -0.57
SPARC-205ENST00000522348 PPEF1O14829 653 aaPredicted RBP11.47□□□□□ -0.57
SPARC-205ENST00000522348 UFL1O94874 794 aa11.47□□□□□ -0.57
SPARC-205ENST00000522348 KLRK1P26718 216 aa11.47□□□□□ -0.57
SPARC-205ENST00000522348 MCM5P33992 734 aa11.47□□□□□ -0.57
SPARC-205ENST00000522348 RALYLQ86SE5 291 aaKnown RBP11.47□□□□□ -0.57
SPARC-205ENST00000522348 TXNRD3Q86VQ6 643 aa11.47□□□□□ -0.57
SPARC-205ENST00000522348 TBC1D16Q8TBP0 767 aa11.47□□□□□ -0.57
SPARC-205ENST00000522348 LARP6Q9BRS8 491 aaKnown RBP11.47□□□□□ -0.57
SPARC-205ENST00000522348 AGXT2Q9BYV1 514 aa11.47□□□□□ -0.57
SPARC-205ENST00000522348 NAPBQ9H115 298 aa11.47□□□□□ -0.57
SPARC-205ENST00000522348 SLC4A4Q9Y6R1 1079 aa11.47□□□□□ -0.57
SPARC-205ENST00000522348 DDX11L8A8MPP1 907 aa11.46□□□□□ -0.57
SPARC-205ENST00000522348 H0YIN7 160 aa11.46□□□□□ -0.57
SPARC-205ENST00000522348 C6orf229H3BNL8 230 aa11.46□□□□□ -0.57
SPARC-205ENST00000522348 LDHCP07864 332 aa11.46□□□□□ -0.57
SPARC-205ENST00000522348 IL1R1P14778 569 aa11.46□□□□□ -0.57
SPARC-205ENST00000522348 GSTO1P78417 241 aa11.46□□□□□ -0.57
SPARC-205ENST00000522348 CHAF1AQ13111 956 aaPredicted RBP11.46□□□□□ -0.57
SPARC-205ENST00000522348 STYK1Q6J9G0 422 aa11.46□□□□□ -0.57
SPARC-205ENST00000522348 GIMAP6Q6P9H5 292 aa11.46□□□□□ -0.57
SPARC-205ENST00000522348 CCDC83Q8IWF9 413 aa11.46□□□□□ -0.57
SPARC-205ENST00000522348 MPNDQ8N594 471 aa11.46□□□□□ -0.57
SPARC-205ENST00000522348 NSUN4Q96CB9 384 aaKnown RBP11.46□□□□□ -0.57
SPARC-205ENST00000522348 ZNF274Q96GC6 653 aaPredicted RBP11.46□□□□□ -0.57
SPARC-205ENST00000522348 CD209Q9NNX6 404 aa11.46□□□□□ -0.57
SPARC-205ENST00000522348 WDR33Q9C0J8 1336 aaKnown RBP11.45□□□□□ -0.58
SPARC-205ENST00000522348 BRD1O95696 1058 aa11.45□□□□□ -0.58
SPARC-205ENST00000522348 HAND2P61296 217 aa11.45□□□□□ -0.58
SPARC-205ENST00000522348 MECOMQ03112 1051 aa11.45□□□□□ -0.58
SPARC-205ENST00000522348 SKOR2Q2VWA4 1001 aaPredicted RBP11.45□□□□□ -0.58
SPARC-205ENST00000522348 MSL1Q68DK7 614 aa11.45□□□□□ -0.58
SPARC-205ENST00000522348 C2CD5Q86YS7 1000 aa11.45□□□□□ -0.58
SPARC-205ENST00000522348 LCORLQ8N3X6 602 aa11.45□□□□□ -0.58
SPARC-205ENST00000522348 SLC16A10Q8TF71 515 aa11.45□□□□□ -0.58
SPARC-205ENST00000522348 ZC3H12CQ9C0D7 883 aaKnown RBP11.45□□□□□ -0.58
SPARC-205ENST00000522348 CNNM2Q9H8M5 875 aa11.45□□□□□ -0.58
SPARC-205ENST00000522348 PPP1R1BQ9UD71 204 aaPredicted RBP11.45□□□□□ -0.58
SPARC-205ENST00000522348 POLLQ9UGP5 575 aa11.45□□□□□ -0.58
SPARC-205ENST00000522348 TNRC6CQ9HCJ0 1690 aaKnown RBP11.45□□□□□ -0.58
SPARC-205ENST00000522348 A0A0G2JLW4 131 aa11.44□□□□□ -0.58
SPARC-205ENST00000522348 PFKFB2O60825 505 aa11.44□□□□□ -0.58
SPARC-205ENST00000522348 ZBTB7AO95365 584 aa11.44□□□□□ -0.58
SPARC-205ENST00000522348 LDHBP07195 334 aaKnown RBP11.44□□□□□ -0.58
SPARC-205ENST00000522348 PDCP20941 246 aa11.44□□□□□ -0.58
SPARC-205ENST00000522348 TDO2P48775 406 aa11.44□□□□□ -0.58
SPARC-205ENST00000522348 EVCP57679 992 aa11.44□□□□□ -0.58
SPARC-205ENST00000522348 CERS3Q8IU89 383 aa11.44□□□□□ -0.58
SPARC-205ENST00000522348 MB21D2Q8IYB1 491 aaPredicted RBP11.44□□□□□ -0.58
SPARC-205ENST00000522348 MIGA1Q8NAN2 632 aa11.44□□□□□ -0.58
SPARC-205ENST00000522348 TBC1D22AQ8WUA7 517 aa11.44□□□□□ -0.58
SPARC-205ENST00000522348 BRF1Q92994 677 aa11.44□□□□□ -0.58
SPARC-205ENST00000522348 CNKSR1Q969H4 720 aa11.44□□□□□ -0.58
SPARC-205ENST00000522348 ZNF622Q969S3 477 aaKnown RBP eCLIP11.44□□□□□ -0.58
SPARC-205ENST00000522348 TCEANC2Q96MN5 208 aa11.44□□□□□ -0.58
SPARC-205ENST00000522348 RIOK1Q9BRS2 568 aaKnown RBP11.44□□□□□ -0.58
SPARC-205ENST00000522348 LLPHQ9BRT6 129 aaKnown RBP11.44□□□□□ -0.58
SPARC-205ENST00000522348 CRNKL1Q9BZJ0 848 aaKnown RBP11.44□□□□□ -0.58
SPARC-205ENST00000522348 KRT23Q9C075 422 aa11.44□□□□□ -0.58
SPARC-205ENST00000522348 COA1Q9GZY4 146 aa11.44□□□□□ -0.58
SPARC-205ENST00000522348 RNF41Q9H4P4 317 aaPredicted RBP11.44□□□□□ -0.58
SPARC-205ENST00000522348 SPON1Q9HCB6 807 aa11.44□□□□□ -0.58
SPARC-205ENST00000522348 ZDHHC9Q9Y397 364 aa11.44□□□□□ -0.58
SPARC-205ENST00000522348 TAF1P21675 1872 aa11.43□□□□□ -0.58
SPARC-205ENST00000522348 PRC1O43663 620 aa11.43□□□□□ -0.58
SPARC-205ENST00000522348 PRKAB2O43741 272 aa11.43□□□□□ -0.58
SPARC-205ENST00000522348 BAG4O95429 457 aaKnown RBP11.43□□□□□ -0.58
SPARC-205ENST00000522348 LARGE1O95461 756 aa11.43□□□□□ -0.58
SPARC-205ENST00000522348 BAG3O95817 575 aa11.43□□□□□ -0.58
SPARC-205ENST00000522348 GJB2P29033 226 aa11.43□□□□□ -0.58
SPARC-205ENST00000522348 COL9A3Q14050 684 aaPredicted RBP11.43□□□□□ -0.58
SPARC-205ENST00000522348 DPP8Q6V1X1 898 aaPredicted RBP11.43□□□□□ -0.58
SPARC-205ENST00000522348 MFSD6Q6ZSS7 791 aa11.43□□□□□ -0.58
SPARC-205ENST00000522348 ADGRA1Q86SQ6 560 aa11.43□□□□□ -0.58
SPARC-205ENST00000522348 DZIP1Q86YF9 867 aaKnown RBP11.43□□□□□ -0.58
SPARC-205ENST00000522348 SLF2Q8IX21 1173 aa11.43□□□□□ -0.58
SPARC-205ENST00000522348 NECAB1Q8N987 351 aa11.43□□□□□ -0.58
SPARC-205ENST00000522348 TMEM87BQ96K49 555 aa11.43□□□□□ -0.58
SPARC-205ENST00000522348 EYA3Q99504 573 aa11.43□□□□□ -0.58
SPARC-205ENST00000522348 MTA3Q9BTC8 594 aa11.43□□□□□ -0.58
SPARC-205ENST00000522348 ATP8A2Q9NTI2 1148 aa11.43□□□□□ -0.58
SPARC-205ENST00000522348 ANAPC4Q9UJX5 808 aa11.43□□□□□ -0.58
SPARC-205ENST00000522348 FAM205AQ6ZU69 1335 aa11.42□□□□□ -0.58
SPARC-205ENST00000522348 STX6O43752 255 aa11.42□□□□□ -0.58
SPARC-205ENST00000522348 DHX16O60231 1041 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms