RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 PTH1RQ03431 593 aa25.67■■□□□ 1.7
R3HCC1-208ENST00000522012 NIM1KQ8IY84 436 aa25.67■■□□□ 1.7
R3HCC1-208ENST00000522012 USP17L3A6NCW0 530 aa25.66■■□□□ 1.7
R3HCC1-208ENST00000522012 USP17L4A6NCW7 530 aa25.66■■□□□ 1.7
R3HCC1-208ENST00000522012 RASSF7Q02833 373 aa25.66■■□□□ 1.7
R3HCC1-208ENST00000522012 STRIP1Q5VSL9 837 aa25.66■■□□□ 1.7
R3HCC1-208ENST00000522012 ARHGAP27Q6ZUM4 889 aa25.66■■□□□ 1.7
R3HCC1-208ENST00000522012 USP17L1Q7RTZ2 530 aa25.66■■□□□ 1.7
R3HCC1-208ENST00000522012 ZNF384Q8TF68 577 aa25.66■■□□□ 1.7
R3HCC1-208ENST00000522012 MXD3Q9BW11 206 aa25.66■■□□□ 1.7
R3HCC1-208ENST00000522012 YDJCA8MPS7 323 aa25.65■■□□□ 1.7
R3HCC1-208ENST00000522012 IGSF3O75054 1194 aa25.65■■□□□ 1.7
R3HCC1-208ENST00000522012 AIDAQ96BJ3 306 aa25.65■■□□□ 1.7
R3HCC1-208ENST00000522012 LTBP3Q9NS15 1303 aa25.65■■□□□ 1.7
R3HCC1-208ENST00000522012 GPAA1O43292 621 aa25.64■■□□□ 1.7
R3HCC1-208ENST00000522012 GSTO1P78417 241 aa25.64■■□□□ 1.7
R3HCC1-208ENST00000522012 ADGRA1Q86SQ6 560 aa25.64■■□□□ 1.7
R3HCC1-208ENST00000522012 CERS5Q8N5B7 392 aa25.64■■□□□ 1.7
R3HCC1-208ENST00000522012 MIGA1Q8NAN2 632 aa25.64■■□□□ 1.7
R3HCC1-208ENST00000522012 EPB41L2O43491 1005 aaKnown RBP25.63■■□□□ 1.69
R3HCC1-208ENST00000522012 TMED8Q6PL24 325 aaPredicted RBP25.63■■□□□ 1.69
R3HCC1-208ENST00000522012 JDP2Q8WYK2 163 aa25.63■■□□□ 1.69
R3HCC1-208ENST00000522012 ZNRF3Q9ULT6 936 aa25.63■■□□□ 1.69
R3HCC1-208ENST00000522012 MBD4O95243 580 aa25.63■■□□□ 1.69
R3HCC1-208ENST00000522012 MCCP23508 829 aa25.63■■□□□ 1.69
R3HCC1-208ENST00000522012 DACT2Q5SW24 774 aa25.63■■□□□ 1.69
R3HCC1-208ENST00000522012 SUGT1Q9Y2Z0 365 aa25.63■■□□□ 1.69
R3HCC1-208ENST00000522012 MAGEB6P1A0A0J9YX57 407 aa25.62■■□□□ 1.69
R3HCC1-208ENST00000522012 F8W031 263 aaPredicted RBP25.62■■□□□ 1.69
R3HCC1-208ENST00000522012 RBM25P49756 843 aaKnown RBP25.62■■□□□ 1.69
R3HCC1-208ENST00000522012 VPS53Q5VIR6 699 aa25.62■■□□□ 1.69
R3HCC1-208ENST00000522012 MAP4K1Q92918 833 aa25.62■■□□□ 1.69
R3HCC1-208ENST00000522012 ARMT1Q9H993 441 aa25.62■■□□□ 1.69
R3HCC1-208ENST00000522012 DOCK2Q92608 1830 aa25.61■■□□□ 1.69
R3HCC1-208ENST00000522012 RAD17O75943 681 aa25.61■■□□□ 1.69
R3HCC1-208ENST00000522012 LDHCP07864 332 aa25.61■■□□□ 1.69
R3HCC1-208ENST00000522012 FKBP1AP62942 108 aaKnown RBP25.61■■□□□ 1.69
R3HCC1-208ENST00000522012 DIXDC1Q155Q3 683 aa25.61■■□□□ 1.69
R3HCC1-208ENST00000522012 STRBPQ96SI9 672 aaKnown RBP25.61■■□□□ 1.69
R3HCC1-208ENST00000522012 HSPD1P10809 573 aaKnown RBP25.6■■□□□ 1.69
R3HCC1-208ENST00000522012 RBM8AQ9Y5S9 174 aaKnown RBP25.6■■□□□ 1.69
R3HCC1-208ENST00000522012 MYH13Q9UKX3 1938 aa25.6■■□□□ 1.69
R3HCC1-208ENST00000522012 COL4A5P29400 1685 aa25.6■■□□□ 1.69
R3HCC1-208ENST00000522012 YBX3P16989 372 aaKnown RBP eCLIP25.59■■□□□ 1.69
R3HCC1-208ENST00000522012 SLF2Q8IX21 1173 aa25.59■■□□□ 1.69
R3HCC1-208ENST00000522012 LCORLQ8N3X6 602 aa25.59■■□□□ 1.69
R3HCC1-208ENST00000522012 DSCC1Q9BVC3 393 aa25.59■■□□□ 1.69
R3HCC1-208ENST00000522012 TTF2Q9UNY4 1162 aaKnown RBP25.59■■□□□ 1.69
R3HCC1-208ENST00000522012 PRELPP51888 382 aa25.58■■□□□ 1.69
R3HCC1-208ENST00000522012 DYNLL1P63167 89 aaKnown RBP25.58■■□□□ 1.69
R3HCC1-208ENST00000522012 HSPA4P34932 840 aa25.58■■□□□ 1.68
R3HCC1-208ENST00000522012 RIOK1Q9BRS2 568 aaKnown RBP25.58■■□□□ 1.68
R3HCC1-208ENST00000522012 NOL10Q9BSC4 688 aaKnown RBP25.58■■□□□ 1.68
R3HCC1-208ENST00000522012 AATFQ9NY61 560 aaKnown RBP eCLIP25.58■■□□□ 1.68
R3HCC1-208ENST00000522012 U3KPZ7 1027 aaPredicted RBP25.58■■□□□ 1.68
R3HCC1-208ENST00000522012 FER1L6Q2WGJ9 1857 aa25.57■■□□□ 1.68
R3HCC1-208ENST00000522012 MYO5AQ9Y4I1 1855 aaKnown RBP25.57■■□□□ 1.68
R3HCC1-208ENST00000522012 MROH7-TTC4A0A0A0MT08 1334 aa25.57■■□□□ 1.68
R3HCC1-208ENST00000522012 PSMD14O00487 310 aa25.57■■□□□ 1.68
R3HCC1-208ENST00000522012 APPP05067 770 aa25.57■■□□□ 1.68
R3HCC1-208ENST00000522012 KIAA0825Q8IV33 1275 aa25.57■■□□□ 1.68
R3HCC1-208ENST00000522012 ZNF784Q8NCA9 323 aaPredicted RBP25.57■■□□□ 1.68
R3HCC1-208ENST00000522012 GNAT2P19087 354 aa25.56■■□□□ 1.68
R3HCC1-208ENST00000522012 SCNN1DP51172 638 aa25.56■■□□□ 1.68
R3HCC1-208ENST00000522012 RSBN1LQ6PCB5 846 aaPredicted RBP25.56■■□□□ 1.68
R3HCC1-208ENST00000522012 SLC4A4Q9Y6R1 1079 aa25.56■■□□□ 1.68
R3HCC1-208ENST00000522012 CHD4Q14839 1912 aa25.55■■□□□ 1.68
R3HCC1-208ENST00000522012 BAG3O95817 575 aa25.55■■□□□ 1.68
R3HCC1-208ENST00000522012 VIL1P09327 827 aaKnown RBP25.55■■□□□ 1.68
R3HCC1-208ENST00000522012 CXCL9Q07325 125 aa25.55■■□□□ 1.68
R3HCC1-208ENST00000522012 NECTIN1Q15223 517 aa25.55■■□□□ 1.68
R3HCC1-208ENST00000522012 ARFGEF1Q9Y6D6 1849 aa25.55■■□□□ 1.68
R3HCC1-208ENST00000522012 UTRNP46939 3433 aa25.55■■□□□ 1.68
R3HCC1-208ENST00000522012 PATL2C9JE40 543 aaKnown RBP25.54■■□□□ 1.68
R3HCC1-208ENST00000522012 FOXP2O15409 715 aa25.54■■□□□ 1.68
R3HCC1-208ENST00000522012 PRKAB2O43741 272 aa25.54■■□□□ 1.68
R3HCC1-208ENST00000522012 LMNB1P20700 586 aa25.54■■□□□ 1.68
R3HCC1-208ENST00000522012 CIAPIN1Q6FI81 312 aa25.54■■□□□ 1.68
R3HCC1-208ENST00000522012 FAM163AQ96GL9 167 aaPredicted RBP25.54■■□□□ 1.68
R3HCC1-208ENST00000522012 PALD1Q9ULE6 856 aa25.54■■□□□ 1.68
R3HCC1-208ENST00000522012 MYH7P12883 1935 aa25.54■■□□□ 1.68
R3HCC1-208ENST00000522012 MYO3BQ8WXR4 1341 aa25.54■■□□□ 1.68
R3HCC1-208ENST00000522012 GPR162Q16538 588 aa25.53■■□□□ 1.68
R3HCC1-208ENST00000522012 CREB3L3Q68CJ9 461 aa25.53■■□□□ 1.68
R3HCC1-208ENST00000522012 BTDP43251 543 aa25.53■■□□□ 1.68
R3HCC1-208ENST00000522012 TNIP1Q15025 636 aa25.53■■□□□ 1.68
R3HCC1-208ENST00000522012 RNF20Q5VTR2 975 aa25.53■■□□□ 1.68
R3HCC1-208ENST00000522012 TEKT1Q969V4 418 aa25.53■■□□□ 1.68
R3HCC1-208ENST00000522012 CTNNA3Q9UI47 895 aa25.53■■□□□ 1.68
R3HCC1-208ENST00000522012 GAKO14976 1311 aa25.52■■□□□ 1.68
R3HCC1-208ENST00000522012 GPR75-ASB3A0A0A6YYF3 556 aa25.52■■□□□ 1.68
R3HCC1-208ENST00000522012 SLC27A2O14975 620 aa25.52■■□□□ 1.68
R3HCC1-208ENST00000522012 FGAP02671 866 aa25.52■■□□□ 1.68
R3HCC1-208ENST00000522012 EIF6P56537 245 aaKnown RBP25.52■■□□□ 1.68
R3HCC1-208ENST00000522012 PPP4CP60510 307 aa25.52■■□□□ 1.68
R3HCC1-208ENST00000522012 CRNKL1Q9BZJ0 848 aaKnown RBP25.52■■□□□ 1.68
R3HCC1-208ENST00000522012 ZBTB12Q9Y330 459 aaPredicted RBP25.52■■□□□ 1.68
R3HCC1-208ENST00000522012 DAGLAQ9Y4D2 1042 aa25.52■■□□□ 1.68
R3HCC1-208ENST00000522012 MAST2Q6P0Q8 1798 aa25.51■■□□□ 1.67
R3HCC1-208ENST00000522012 GSG1L2A8MUP6 293 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms