RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 MARVELD3Q96A59 401 aa11.72□□□□□ -0.53
TRAPPC9-212ENST00000521944 AOX1Q06278 1338 aa11.71□□□□□ -0.53
TRAPPC9-212ENST00000521944 ATP5J2-PTCD1G3V325 749 aa11.71□□□□□ -0.53
TRAPPC9-212ENST00000521944 GJA8P48165 433 aa11.71□□□□□ -0.53
TRAPPC9-212ENST00000521944 OTUD7BQ6GQQ9 843 aa11.71□□□□□ -0.53
TRAPPC9-212ENST00000521944 APOBEC3FQ8IUX4 373 aaKnown RBP11.71□□□□□ -0.53
TRAPPC9-212ENST00000521944 FAM43AQ8N2R8 423 aa11.71□□□□□ -0.53
TRAPPC9-212ENST00000521944 TIMELESSQ9UNS1 1208 aa11.71□□□□□ -0.53
TRAPPC9-212ENST00000521944 PCDHAC2Q9Y5I4 1007 aa11.71□□□□□ -0.53
TRAPPC9-212ENST00000521944 UNCXA6NJT0 531 aa11.7□□□□□ -0.54
TRAPPC9-212ENST00000521944 IRS4O14654 1257 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC9-212ENST00000521944 NBPF12Q5TAG4 269 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC9-212ENST00000521944 TXNRD3Q86VQ6 643 aa11.7□□□□□ -0.54
TRAPPC9-212ENST00000521944 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRAPPC9-212ENST00000521944 OGFOD1Q8N543 542 aa11.7□□□□□ -0.54
TRAPPC9-212ENST00000521944 PRDM6Q9NQX0 595 aa11.7□□□□□ -0.54
TRAPPC9-212ENST00000521944 NR2E3Q9Y5X4 410 aa11.7□□□□□ -0.54
TRAPPC9-212ENST00000521944 DLG5Q8TDM6 1919 aa11.7□□□□□ -0.54
TRAPPC9-212ENST00000521944 GJB1P08034 283 aa11.69□□□□□ -0.54
TRAPPC9-212ENST00000521944 MAP3K9P80192 1104 aa11.69□□□□□ -0.54
TRAPPC9-212ENST00000521944 LACTBP83111 547 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC9-212ENST00000521944 STRIP1Q5VSL9 837 aa11.69□□□□□ -0.54
TRAPPC9-212ENST00000521944 GDF15Q99988 308 aa11.69□□□□□ -0.54
TRAPPC9-212ENST00000521944 HTATIP2Q9BUP3 242 aa11.69□□□□□ -0.54
TRAPPC9-212ENST00000521944 XDHP47989 1333 aa11.68□□□□□ -0.54
TRAPPC9-212ENST00000521944 PPP1R12BO60237 982 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC9-212ENST00000521944 NUDT7P0C024 238 aa11.68□□□□□ -0.54
TRAPPC9-212ENST00000521944 TAF1CQ15572 869 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC9-212ENST00000521944 KIAA0825Q8IV33 1275 aa11.68□□□□□ -0.54
TRAPPC9-212ENST00000521944 OPTNQ96CV9 577 aa11.68□□□□□ -0.54
TRAPPC9-212ENST00000521944 PLEKHF1Q96S99 279 aa11.68□□□□□ -0.54
TRAPPC9-212ENST00000521944 ZFYVE28Q9HCC9 887 aa11.68□□□□□ -0.54
TRAPPC9-212ENST00000521944 CCL5P13501 91 aa11.67□□□□□ -0.54
TRAPPC9-212ENST00000521944 ATP2B4P23634 1241 aa11.67□□□□□ -0.54
TRAPPC9-212ENST00000521944 BMP8BP34820 402 aa11.67□□□□□ -0.54
TRAPPC9-212ENST00000521944 TRIM28Q13263 835 aaKnown RBP11.67□□□□□ -0.54
TRAPPC9-212ENST00000521944 ARHGEF6Q15052 776 aa11.67□□□□□ -0.54
TRAPPC9-212ENST00000521944 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC9-212ENST00000521944 PLBD2Q8NHP8 589 aa11.67□□□□□ -0.54
TRAPPC9-212ENST00000521944 ELP3Q9H9T3 547 aa11.67□□□□□ -0.54
TRAPPC9-212ENST00000521944 EMILIN3Q9NT22 766 aa11.67□□□□□ -0.54
TRAPPC9-212ENST00000521944 NUDCQ9Y266 331 aa11.67□□□□□ -0.54
TRAPPC9-212ENST00000521944 CDH23Q9H251 3354 aa11.67□□□□□ -0.54
TRAPPC9-212ENST00000521944 MYO3BQ8WXR4 1341 aa11.66□□□□□ -0.54
TRAPPC9-212ENST00000521944 COL1A1P02452 1464 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC9-212ENST00000521944 TLR2O60603 784 aa11.66□□□□□ -0.54
TRAPPC9-212ENST00000521944 KLRK1P26718 216 aa11.66□□□□□ -0.54
TRAPPC9-212ENST00000521944 KRT24Q2M2I5 525 aa11.66□□□□□ -0.54
TRAPPC9-212ENST00000521944 ANKRD13DQ6ZTN6 518 aa11.66□□□□□ -0.54
TRAPPC9-212ENST00000521944 CDAN1Q8IWY9 1227 aa11.66□□□□□ -0.54
TRAPPC9-212ENST00000521944 ANKRD13AQ8IZ07 590 aa11.66□□□□□ -0.54
TRAPPC9-212ENST00000521944 CERS5Q8N5B7 392 aa11.66□□□□□ -0.54
TRAPPC9-212ENST00000521944 NKX2-3Q8TAU0 364 aa11.66□□□□□ -0.54
TRAPPC9-212ENST00000521944 CCDC85AQ96PX6 553 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC9-212ENST00000521944 TSPYL4Q9UJ04 414 aa11.66□□□□□ -0.54
TRAPPC9-212ENST00000521944 MED23Q9ULK4 1368 aa11.66□□□□□ -0.54
TRAPPC9-212ENST00000521944 ALPK3Q96L96 1907 aa11.65□□□□□ -0.54
TRAPPC9-212ENST00000521944 CCL15-CCL14A0A0B4J2E2 113 aa11.65□□□□□ -0.54
TRAPPC9-212ENST00000521944 EVI5O60447 810 aa11.65□□□□□ -0.54
TRAPPC9-212ENST00000521944 FARP2O94887 1054 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC9-212ENST00000521944 IREB2P48200 963 aaKnown RBP11.65□□□□□ -0.54
TRAPPC9-212ENST00000521944 MMP14P50281 582 aa11.65□□□□□ -0.54
TRAPPC9-212ENST00000521944 BCAMP50895 628 aa11.65□□□□□ -0.54
TRAPPC9-212ENST00000521944 CCL15Q16663 113 aa11.65□□□□□ -0.54
TRAPPC9-212ENST00000521944 LRIT3Q3SXY7 679 aa11.65□□□□□ -0.54
TRAPPC9-212ENST00000521944 TTLL5Q6EMB2 1281 aa11.65□□□□□ -0.54
TRAPPC9-212ENST00000521944 MTMR14Q8NCE2 650 aa11.65□□□□□ -0.54
TRAPPC9-212ENST00000521944 U2AF1L4Q8WU68 220 aaKnown RBP11.65□□□□□ -0.54
TRAPPC9-212ENST00000521944 JARID2Q92833 1246 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC9-212ENST00000521944 KHSRPQ92945 711 aaKnown RBP eCLIP11.65□□□□□ -0.54
TRAPPC9-212ENST00000521944 PRMT6Q96LA8 375 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC9-212ENST00000521944 TRIM47Q96LD4 638 aa11.65□□□□□ -0.54
TRAPPC9-212ENST00000521944 CFAP53Q96M91 514 aa11.65□□□□□ -0.54
TRAPPC9-212ENST00000521944 CHPF2Q9P2E5 772 aa11.65□□□□□ -0.54
TRAPPC9-212ENST00000521944 OTOFQ9HC10 1997 aa11.65□□□□□ -0.55
TRAPPC9-212ENST00000521944 ZNF804BA4D1E1 1349 aa11.64□□□□□ -0.55
TRAPPC9-212ENST00000521944 CLRN2A0PK11 232 aa11.64□□□□□ -0.55
TRAPPC9-212ENST00000521944 FAM205CA6NFA0 338 aa11.64□□□□□ -0.55
TRAPPC9-212ENST00000521944 GNRH1P01148 92 aa11.64□□□□□ -0.55
TRAPPC9-212ENST00000521944 GRK4P32298 578 aa11.64□□□□□ -0.55
TRAPPC9-212ENST00000521944 SUPT20HL1Q3ZLR7 823 aa11.64□□□□□ -0.55
TRAPPC9-212ENST00000521944 ZBTB38Q8NAP3 1195 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC9-212ENST00000521944 FBXW7Q969H0 707 aa11.64□□□□□ -0.55
TRAPPC9-212ENST00000521944 COA1Q9GZY4 146 aa11.64□□□□□ -0.55
TRAPPC9-212ENST00000521944 RNF208Q9H0X6 261 aa11.64□□□□□ -0.55
TRAPPC9-212ENST00000521944 SRRDQ9UH36 339 aa11.64□□□□□ -0.55
TRAPPC9-212ENST00000521944 RAPGEFL1Q9UHV5 662 aa11.64□□□□□ -0.55
TRAPPC9-212ENST00000521944 MINPP1Q9UNW1 487 aa11.64□□□□□ -0.55
TRAPPC9-212ENST00000521944 RIPOR2Q9Y4F9 1068 aa11.64□□□□□ -0.55
TRAPPC9-212ENST00000521944 PPP2R3BQ9Y5P8 575 aa11.64□□□□□ -0.55
TRAPPC9-212ENST00000521944 BTBD19C9JJ37 291 aa11.63□□□□□ -0.55
TRAPPC9-212ENST00000521944 OSBPP22059 807 aa11.63□□□□□ -0.55
TRAPPC9-212ENST00000521944 PPP2R1AP30153 589 aa11.63□□□□□ -0.55
TRAPPC9-212ENST00000521944 PRMT2P55345 433 aa11.63□□□□□ -0.55
TRAPPC9-212ENST00000521944 RASA3Q14644 834 aa11.63□□□□□ -0.55
TRAPPC9-212ENST00000521944 DLGAP5Q15398 846 aa11.63□□□□□ -0.55
TRAPPC9-212ENST00000521944 NFE2L2Q16236 605 aa11.63□□□□□ -0.55
TRAPPC9-212ENST00000521944 C17orf99Q6UX52 265 aa11.63□□□□□ -0.55
TRAPPC9-212ENST00000521944 TEPSINQ96N21 525 aa11.63□□□□□ -0.55
TRAPPC9-212ENST00000521944 GUCD1Q96NT3 240 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms