RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 CCDC85AQ96PX6 553 aaPredicted RBP11.74□□□□□ -0.53
SPARC-202ENST00000520687 TAF1LQ8IZX4 1826 aa11.74□□□□□ -0.53
SPARC-202ENST00000520687 SCN7AQ01118 1682 aa11.73□□□□□ -0.53
SPARC-202ENST00000520687 ZNF213O14771 459 aa11.73□□□□□ -0.53
SPARC-202ENST00000520687 RPS6KA4O75676 772 aa11.73□□□□□ -0.53
SPARC-202ENST00000520687 GNAT2P19087 354 aa11.73□□□□□ -0.53
SPARC-202ENST00000520687 MCM5P33992 734 aa11.73□□□□□ -0.53
SPARC-202ENST00000520687 SLC9C2Q5TAH2 1124 aa11.73□□□□□ -0.53
SPARC-202ENST00000520687 NAA16Q6N069 864 aaPredicted RBP11.73□□□□□ -0.53
SPARC-202ENST00000520687 GAS2L3Q86XJ1 694 aa11.73□□□□□ -0.53
SPARC-202ENST00000520687 FAM184AQ8NB25 1140 aa11.73□□□□□ -0.53
SPARC-202ENST00000520687 SMARCC2Q8TAQ2 1214 aa11.73□□□□□ -0.53
SPARC-202ENST00000520687 GNL3LQ9NVN8 582 aaKnown RBP11.73□□□□□ -0.53
SPARC-202ENST00000520687 VPS37CA5D8V6 355 aaPredicted RBP11.72□□□□□ -0.53
SPARC-202ENST00000520687 GPAA1O43292 621 aa11.72□□□□□ -0.53
SPARC-202ENST00000520687 HCLS1P14317 486 aaPredicted RBP11.72□□□□□ -0.53
SPARC-202ENST00000520687 NASPP49321 788 aaPredicted RBP11.72□□□□□ -0.53
SPARC-202ENST00000520687 CCDC173Q0VFZ6 552 aa11.72□□□□□ -0.53
SPARC-202ENST00000520687 TRDNQ13061 729 aa11.72□□□□□ -0.53
SPARC-202ENST00000520687 SCARF1Q14162 830 aa11.72□□□□□ -0.53
SPARC-202ENST00000520687 CCDC183Q5T5S1 534 aa11.72□□□□□ -0.53
SPARC-202ENST00000520687 SPATA5Q8NB90 893 aa11.72□□□□□ -0.53
SPARC-202ENST00000520687 FLAD1Q8NFF5 587 aa11.72□□□□□ -0.53
SPARC-202ENST00000520687 NCOA7Q8NI08 942 aa11.72□□□□□ -0.53
SPARC-202ENST00000520687 BRF1Q92994 677 aa11.72□□□□□ -0.53
SPARC-202ENST00000520687 LARP6Q9BRS8 491 aaKnown RBP11.72□□□□□ -0.53
SPARC-202ENST00000520687 TAF6LQ9Y6J9 622 aa11.72□□□□□ -0.53
SPARC-202ENST00000520687 CARMIL3Q8ND23 1372 aa11.72□□□□□ -0.53
SPARC-202ENST00000520687 FGAP02671 866 aa11.71□□□□□ -0.53
SPARC-202ENST00000520687 PDE6AP16499 860 aa11.71□□□□□ -0.53
SPARC-202ENST00000520687 UBE4AQ14139 1066 aa11.71□□□□□ -0.53
SPARC-202ENST00000520687 STOX1Q6ZVD7 989 aa11.71□□□□□ -0.53
SPARC-202ENST00000520687 RALYLQ86SE5 291 aaKnown RBP11.71□□□□□ -0.53
SPARC-202ENST00000520687 NARFQ9UHQ1 456 aa11.71□□□□□ -0.53
SPARC-202ENST00000520687 SEMA3EO15041 775 aa11.71□□□□□ -0.54
SPARC-202ENST00000520687 PHKA1P46020 1223 aa11.71□□□□□ -0.54
SPARC-202ENST00000520687 ANKRD18AQ8IVF6 992 aa11.71□□□□□ -0.54
SPARC-202ENST00000520687 LINC00116Q8NCU8 138 aa11.71□□□□□ -0.54
SPARC-202ENST00000520687 PPP1R9BQ96SB3 815 aa11.71□□□□□ -0.54
SPARC-202ENST00000520687 MTA3Q9BTC8 594 aa11.71□□□□□ -0.54
SPARC-202ENST00000520687 RRAGDQ9NQL2 400 aaPredicted RBP11.71□□□□□ -0.54
SPARC-202ENST00000520687 BSDC1Q9NW68 430 aaPredicted RBP11.71□□□□□ -0.54
SPARC-202ENST00000520687 TMEM63CQ9P1W3 806 aa11.71□□□□□ -0.54
SPARC-202ENST00000520687 CFAP45Q9UL16 551 aa11.71□□□□□ -0.54
SPARC-202ENST00000520687 CNPY2Q9Y2B0 182 aa11.71□□□□□ -0.54
SPARC-202ENST00000520687 CCDC85CA6NKD9 419 aa11.7□□□□□ -0.54
SPARC-202ENST00000520687 PATL2C9JE40 543 aaKnown RBP11.7□□□□□ -0.54
SPARC-202ENST00000520687 H3BQV1 296 aa11.7□□□□□ -0.54
SPARC-202ENST00000520687 UVSSAQ2YD98 709 aa11.7□□□□□ -0.54
SPARC-202ENST00000520687 NACAP1Q9BZK3 213 aa11.7□□□□□ -0.54
SPARC-202ENST00000520687 PUS7LQ9H0K6 701 aaKnown RBP11.7□□□□□ -0.54
SPARC-202ENST00000520687 TSPY26PQ9H489 355 aa11.7□□□□□ -0.54
SPARC-202ENST00000520687 RRAGCQ9HB90 399 aa11.7□□□□□ -0.54
SPARC-202ENST00000520687 PIH1D3Q9NQM4 214 aaKnown RBP11.7□□□□□ -0.54
SPARC-202ENST00000520687 PDS5AQ29RF7 1337 aaKnown RBP11.69□□□□□ -0.54
SPARC-202ENST00000520687 ARAP2Q8WZ64 1704 aa11.69□□□□□ -0.54
SPARC-202ENST00000520687 TCRBV5S4A2TA0A5A2 114 aa11.69□□□□□ -0.54
SPARC-202ENST00000520687 ZPR1O75312 459 aa11.69□□□□□ -0.54
SPARC-202ENST00000520687 IDH1O75874 414 aaKnown RBP11.69□□□□□ -0.54
SPARC-202ENST00000520687 PDIA3P30101 505 aaKnown RBP11.69□□□□□ -0.54
SPARC-202ENST00000520687 HS1BP3Q53T59 392 aa11.69□□□□□ -0.54
SPARC-202ENST00000520687 ARHGAP27Q6ZUM4 889 aa11.69□□□□□ -0.54
SPARC-202ENST00000520687 MB21D2Q8IYB1 491 aaPredicted RBP11.69□□□□□ -0.54
SPARC-202ENST00000520687 TMEM87BQ96K49 555 aa11.69□□□□□ -0.54
SPARC-202ENST00000520687 TCEANC2Q96MN5 208 aa11.69□□□□□ -0.54
SPARC-202ENST00000520687 STRBPQ96SI9 672 aaKnown RBP11.69□□□□□ -0.54
SPARC-202ENST00000520687 SETDB2Q96T68 719 aa11.69□□□□□ -0.54
SPARC-202ENST00000520687 ANKRD2Q9GZV1 360 aa11.69□□□□□ -0.54
SPARC-202ENST00000520687 CNNM2Q9H8M5 875 aa11.69□□□□□ -0.54
SPARC-202ENST00000520687 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.69□□□□□ -0.54
SPARC-202ENST00000520687 ZNF532Q9HCE3 1301 aa11.68□□□□□ -0.54
SPARC-202ENST00000520687 FOXP2O15409 715 aa11.68□□□□□ -0.54
SPARC-202ENST00000520687 PRC1O43663 620 aa11.68□□□□□ -0.54
SPARC-202ENST00000520687 CHGBP05060 677 aa11.68□□□□□ -0.54
SPARC-202ENST00000520687 GTF2E1P29083 439 aaPredicted RBP11.68□□□□□ -0.54
SPARC-202ENST00000520687 DNM1Q05193 864 aaKnown RBP11.68□□□□□ -0.54
SPARC-202ENST00000520687 CHRNDQ07001 517 aa11.68□□□□□ -0.54
SPARC-202ENST00000520687 SCRN1Q12765 414 aa11.68□□□□□ -0.54
SPARC-202ENST00000520687 STK3Q13188 491 aa11.68□□□□□ -0.54
SPARC-202ENST00000520687 CAVIN4Q5BKX8 364 aa11.68□□□□□ -0.54
SPARC-202ENST00000520687 TPTE2Q6XPS3 522 aa11.68□□□□□ -0.54
SPARC-202ENST00000520687 NSUN7Q8NE18 718 aaKnown RBP11.68□□□□□ -0.54
SPARC-202ENST00000520687 TRIM44Q96DX7 344 aaPredicted RBP11.68□□□□□ -0.54
SPARC-202ENST00000520687 RTCBQ9Y3I0 505 aaKnown RBP11.68□□□□□ -0.54
SPARC-202ENST00000520687 DDX60Q8IY21 1712 aaKnown RBP11.68□□□□□ -0.54
SPARC-202ENST00000520687 ZNF804BA4D1E1 1349 aa11.68□□□□□ -0.54
SPARC-202ENST00000520687 GOLGA6L4A6NEF3 574 aa11.67□□□□□ -0.54
SPARC-202ENST00000520687 CDKL5O76039 1030 aa11.67□□□□□ -0.54
SPARC-202ENST00000520687 APOBRQ0VD83 1088 aa11.67□□□□□ -0.54
SPARC-202ENST00000520687 RASGRF1Q13972 1273 aa11.67□□□□□ -0.54
SPARC-202ENST00000520687 C9orf131Q5VYM1 1079 aa11.67□□□□□ -0.54
SPARC-202ENST00000520687 CPLX2Q6PUV4 134 aaKnown RBP11.67□□□□□ -0.54
SPARC-202ENST00000520687 ZNF396Q96N95 335 aaPredicted RBP11.67□□□□□ -0.54
SPARC-202ENST00000520687 NLRP3Q96P20 1036 aa11.67□□□□□ -0.54
SPARC-202ENST00000520687 SEC31BQ9NQW1 1179 aa11.67□□□□□ -0.54
SPARC-202ENST00000520687 CCNL1Q9UK58 526 aaPredicted RBP11.67□□□□□ -0.54
SPARC-202ENST00000520687 DENND2AQ9ULE3 1009 aa11.67□□□□□ -0.54
SPARC-202ENST00000520687 SYCE3A1L190 88 aa11.67□□□□□ -0.54
SPARC-202ENST00000520687 FIBPO43427 364 aa11.67□□□□□ -0.54
SPARC-202ENST00000520687 GADD45BO75293 160 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms