RNA–Protein interactions for RNA: ENST00000520668.1

CDH12-205, Transcript of cadherin 12, humanhuman

TSL 4

Gene CDH12, Length 539 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-205ENST00000520668 C1orf141Q5JVX7 400 aa8.84□□□□□ -0.99
CDH12-205ENST00000520668 SLC27A3Q5K4L6 730 aa8.84□□□□□ -0.99
CDH12-205ENST00000520668 CCDC102BQ68D86 513 aa8.84□□□□□ -0.99
CDH12-205ENST00000520668 MCM10Q7L590 875 aa8.84□□□□□ -0.99
CDH12-205ENST00000520668 LARGE2Q8N3Y3 721 aa8.84□□□□□ -0.99
CDH12-205ENST00000520668 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.84□□□□□ -0.99
CDH12-205ENST00000520668 ZNF594Q96JF6 807 aaPredicted RBP8.84□□□□□ -0.99
CDH12-205ENST00000520668 SLC52A2Q9HAB3 445 aa8.84□□□□□ -0.99
CDH12-205ENST00000520668 MAN1A2O60476 641 aa8.83□□□□□ -1
CDH12-205ENST00000520668 ZBTB7AO95365 584 aa8.83□□□□□ -1
CDH12-205ENST00000520668 GPC1P35052 558 aa8.83□□□□□ -1
CDH12-205ENST00000520668 CABP4P57796 275 aa8.83□□□□□ -1
CDH12-205ENST00000520668 CENPCQ03188 943 aa8.83□□□□□ -1
CDH12-205ENST00000520668 PTK7Q13308 1070 aa8.83□□□□□ -1
CDH12-205ENST00000520668 TPCN2Q8NHX9 752 aa8.83□□□□□ -1
CDH12-205ENST00000520668 ARID3AQ99856 593 aa8.83□□□□□ -1
CDH12-205ENST00000520668 THUMPD2Q9BTF0 503 aaKnown RBP8.83□□□□□ -1
CDH12-205ENST00000520668 STK32BQ9NY57 414 aa8.83□□□□□ -1
CDH12-205ENST00000520668 SERTAD1Q9UHV2 236 aa8.83□□□□□ -1
CDH12-205ENST00000520668 SENP3-EIF4A1A0A087X0R7 540 aa8.82□□□□□ -1
CDH12-205ENST00000520668 FAM196BA6NMK8 535 aa8.82□□□□□ -1
CDH12-205ENST00000520668 GNAT3A8MTJ3 354 aa8.82□□□□□ -1
CDH12-205ENST00000520668 USP17L15C9J2P7 530 aa8.82□□□□□ -1
CDH12-205ENST00000520668 USP17L10C9JJH3 530 aa8.82□□□□□ -1
CDH12-205ENST00000520668 USP17L13C9JLJ4 530 aa8.82□□□□□ -1
CDH12-205ENST00000520668 USP17L12C9JPN9 530 aa8.82□□□□□ -1
CDH12-205ENST00000520668 USP17L11C9JVI0 530 aa8.82□□□□□ -1
CDH12-205ENST00000520668 USP17L21D6R901 530 aa8.82□□□□□ -1
CDH12-205ENST00000520668 USP17L18D6R9N7 530 aa8.82□□□□□ -1
CDH12-205ENST00000520668 USP17L22D6RA61 530 aa8.82□□□□□ -1
CDH12-205ENST00000520668 USP17L17D6RBQ6 530 aa8.82□□□□□ -1
CDH12-205ENST00000520668 USP17L19D6RCP7 530 aa8.82□□□□□ -1
CDH12-205ENST00000520668 USP17L20D6RJB6 530 aa8.82□□□□□ -1
CDH12-205ENST00000520668 PTCD1O75127 700 aaKnown RBP8.82□□□□□ -1
CDH12-205ENST00000520668 HSP90AB1P08238 724 aaKnown RBP8.82□□□□□ -1
CDH12-205ENST00000520668 USP17L24Q0WX57 530 aa8.82□□□□□ -1
CDH12-205ENST00000520668 COL23A1Q86Y22 540 aaPredicted RBP8.82□□□□□ -1
CDH12-205ENST00000520668 CCDC146Q8IYE0 955 aa8.82□□□□□ -1
CDH12-205ENST00000520668 SIX5Q8N196 739 aa8.82□□□□□ -1
CDH12-205ENST00000520668 GAS2L2Q8NHY3 880 aa8.82□□□□□ -1
CDH12-205ENST00000520668 FHDC1Q9C0D6 1143 aaPredicted RBP8.82□□□□□ -1
CDH12-205ENST00000520668 GRIP2Q9C0E4 1043 aa8.82□□□□□ -1
CDH12-205ENST00000520668 ZNF358Q9NW07 568 aa8.82□□□□□ -1
CDH12-205ENST00000520668 ADAMTS8Q9UP79 889 aa8.82□□□□□ -1
CDH12-205ENST00000520668 NUDCQ9Y266 331 aa8.82□□□□□ -1
CDH12-205ENST00000520668 KIAA1551Q9HCM1 1747 aa8.82□□□□□ -1
CDH12-205ENST00000520668 PRAMEF22A3QJZ6 481 aa8.81□□□□□ -1
CDH12-205ENST00000520668 PRICKLE2Q7Z3G6 844 aa8.81□□□□□ -1
CDH12-205ENST00000520668 BCORQ6W2J9 1755 aa8.81□□□□□ -1
CDH12-205ENST00000520668 SFI1A8K8P3 1242 aa8.8□□□□□ -1
CDH12-205ENST00000520668 LYSMD3Q7Z3D4 306 aa8.8□□□□□ -1
CDH12-205ENST00000520668 SMARCC1Q92922 1105 aaPredicted RBP8.8□□□□□ -1
CDH12-205ENST00000520668 PBXIP1Q96AQ6 731 aa8.8□□□□□ -1
CDH12-205ENST00000520668 RRP7AQ9Y3A4 280 aaKnown RBP8.8□□□□□ -1
CDH12-205ENST00000520668 AFDNP55196 1824 aaKnown RBP8.8□□□□□ -1
CDH12-205ENST00000520668 SCN7AQ01118 1682 aa8.79□□□□□ -1
CDH12-205ENST00000520668 SMTNP53814 917 aa8.79□□□□□ -1
CDH12-205ENST00000520668 DPYDQ12882 1025 aa8.79□□□□□ -1
CDH12-205ENST00000520668 TLR1Q15399 786 aa8.79□□□□□ -1
CDH12-205ENST00000520668 NFE2L2Q16236 605 aa8.79□□□□□ -1
CDH12-205ENST00000520668 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.79□□□□□ -1
CDH12-205ENST00000520668 MSL1Q68DK7 614 aa8.79□□□□□ -1
CDH12-205ENST00000520668 DNAJC10Q8IXB1 793 aa8.79□□□□□ -1
CDH12-205ENST00000520668 ZNF496Q96IT1 587 aaPredicted RBP8.79□□□□□ -1
CDH12-205ENST00000520668 ARXQ96QS3 562 aa8.79□□□□□ -1
CDH12-205ENST00000520668 ZSCAN10Q96SZ4 725 aaPredicted RBP8.79□□□□□ -1
CDH12-205ENST00000520668 MIS18AQ9NYP9 233 aa8.79□□□□□ -1
CDH12-205ENST00000520668 TFCP2L1Q9NZI6 479 aa8.79□□□□□ -1
CDH12-205ENST00000520668 KIF13BQ9NQT8 1826 aa8.79□□□□□ -1
CDH12-205ENST00000520668 BACH1O14867 736 aa8.78□□□□□ -1
CDH12-205ENST00000520668 TMPOP42166 694 aaKnown RBP8.78□□□□□ -1
CDH12-205ENST00000520668 MTFR1Q15390 333 aa8.78□□□□□ -1
CDH12-205ENST00000520668 INTS5Q6P9B9 1019 aaKnown RBP8.78□□□□□ -1
CDH12-205ENST00000520668 ANKMY2Q8IV38 441 aa8.78□□□□□ -1
CDH12-205ENST00000520668 CNTNAP4Q9C0A0 1308 aa8.78□□□□□ -1
CDH12-205ENST00000520668 HEG1Q9ULI3 1381 aa8.77□□□□□ -1.01
CDH12-205ENST00000520668 N4BP2Q86UW6 1770 aaPredicted RBP8.77□□□□□ -1.01
CDH12-205ENST00000520668 A6NJY4 79 aa8.77□□□□□ -1.01
CDH12-205ENST00000520668 CYP19A1P11511 503 aaPredicted RBP8.77□□□□□ -1.01
CDH12-205ENST00000520668 RHOQP17081 205 aa8.77□□□□□ -1.01
CDH12-205ENST00000520668 CRKLP46109 303 aaKnown RBP8.77□□□□□ -1.01
CDH12-205ENST00000520668 POU4F2Q12837 409 aa8.77□□□□□ -1.01
CDH12-205ENST00000520668 ZNF790Q6PG37 636 aa8.77□□□□□ -1.01
CDH12-205ENST00000520668 TNS4Q8IZW8 715 aa8.77□□□□□ -1.01
CDH12-205ENST00000520668 SPON1Q9HCB6 807 aa8.77□□□□□ -1.01
CDH12-205ENST00000520668 USP3Q9Y6I4 520 aa8.77□□□□□ -1.01
CDH12-205ENST00000520668 BRCA1P38398 1863 aaKnown RBP8.77□□□□□ -1.01
CDH12-205ENST00000520668 BTBD11A6QL63 1104 aa8.76□□□□□ -1.01
CDH12-205ENST00000520668 SPATA31C2B4DYI2 1134 aa8.76□□□□□ -1.01
CDH12-205ENST00000520668 ATG7O95352 703 aa8.76□□□□□ -1.01
CDH12-205ENST00000520668 PIP4K2AP48426 406 aaPredicted RBP8.76□□□□□ -1.01
CDH12-205ENST00000520668 EPHA4P54764 986 aa8.76□□□□□ -1.01
CDH12-205ENST00000520668 SEC13P55735 322 aa8.76□□□□□ -1.01
CDH12-205ENST00000520668 PTSQ03393 145 aa8.76□□□□□ -1.01
CDH12-205ENST00000520668 TEFQ10587 303 aa8.76□□□□□ -1.01
CDH12-205ENST00000520668 TSEN2Q8NCE0 465 aaKnown RBP8.76□□□□□ -1.01
CDH12-205ENST00000520668 PNISRQ8TF01 805 aaKnown RBP8.76□□□□□ -1.01
CDH12-205ENST00000520668 MTFR1LQ9H019 292 aa8.76□□□□□ -1.01
CDH12-205ENST00000520668 ZMIZ1Q9ULJ6 1067 aa8.76□□□□□ -1.01
CDH12-205ENST00000520668 NOVA2Q9UNW9 492 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms