RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 GPRC5DQ9NZD1 345 aa6.86□□□□□ -1.31
CTNNA1-220ENST00000520260 SCN4AP35499 1836 aa6.85□□□□□ -1.31
CTNNA1-220ENST00000520260 A0A1B0GUL7 405 aa6.85□□□□□ -1.31
CTNNA1-220ENST00000520260 TAF5LO75529 589 aa6.85□□□□□ -1.31
CTNNA1-220ENST00000520260 RAD17O75943 681 aa6.85□□□□□ -1.31
CTNNA1-220ENST00000520260 LDHBP07195 334 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-220ENST00000520260 VIL1P09327 827 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-220ENST00000520260 RLBP1P12271 317 aa6.85□□□□□ -1.31
CTNNA1-220ENST00000520260 HOXB3P14651 431 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-220ENST00000520260 HOXB1P14653 301 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-220ENST00000520260 GMPSP49915 693 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-220ENST00000520260 RBM5P52756 815 aaKnown RBP eCLIP6.85□□□□□ -1.31
CTNNA1-220ENST00000520260 HDLBPQ00341 1268 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-220ENST00000520260 DLGAP5Q15398 846 aa6.85□□□□□ -1.31
CTNNA1-220ENST00000520260 EAPPQ56P03 285 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-220ENST00000520260 MFSD14BQ5SR56 506 aa6.85□□□□□ -1.31
CTNNA1-220ENST00000520260 APOBEC3FQ8IUX4 373 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-220ENST00000520260 SULF1Q8IWU6 871 aa6.85□□□□□ -1.31
CTNNA1-220ENST00000520260 AMOTL1Q8IY63 956 aa6.85□□□□□ -1.31
CTNNA1-220ENST00000520260 EXOC6Q8TAG9 804 aa6.85□□□□□ -1.31
CTNNA1-220ENST00000520260 TEKT1Q969V4 418 aa6.85□□□□□ -1.31
CTNNA1-220ENST00000520260 KAZALD1Q96I82 304 aa6.85□□□□□ -1.31
CTNNA1-220ENST00000520260 PLA2G2EQ9NZK7 142 aa6.85□□□□□ -1.31
CTNNA1-220ENST00000520260 PPP2R3BQ9Y5P8 575 aa6.85□□□□□ -1.31
CTNNA1-220ENST00000520260 SNED1Q8TER0 1413 aa6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 FAM205AQ6ZU69 1335 aa6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 PITPNM2Q9BZ72 1349 aa6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 PSMD14O00487 310 aa6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 EIF5BO60841 1220 aaKnown RBP6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 DDNO94850 711 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 BAG3O95817 575 aa6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 RFX5P48382 616 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 GTF2IP78347 998 aa6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 CXCL9Q07325 125 aa6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 TFCP2Q12800 502 aa6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 MAP3K12Q12852 859 aa6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 HDAC1Q13547 482 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 KIF4BQ2VIQ3 1234 aa6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 LRRC24Q50LG9 513 aa6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 TNNI3KQ59H18 835 aa6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 OLFM4Q6UX06 510 aa6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 AACSQ86V21 672 aa6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 TICAM2Q86XR7 235 aa6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 MICALL2Q8IY33 904 aa6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 PDCD7Q8N8D1 485 aaKnown RBP6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 HELBQ8NG08 1087 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 RHPN1Q8TCX5 695 aa6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 ZNF512BQ96KM6 892 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 C1orf115Q9H7X2 142 aa6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 RRAGCQ9HB90 399 aa6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 LRP2BPQ9P2M1 347 aa6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 CNOT7Q9UIV1 285 aaKnown RBP6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 SERPINA10Q9UK55 444 aa6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 FPGT-TNNI3KV9GXZ4 949 aa6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 SPEF2Q9C093 1822 aa6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 COL1A1P02452 1464 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 WDR90Q96KV7 1748 aa6.84□□□□□ -1.31
CTNNA1-220ENST00000520260 ZNF541Q9H0D2 1346 aa6.83□□□□□ -1.32
CTNNA1-220ENST00000520260 SALL1Q9NSC2 1324 aa6.83□□□□□ -1.32
CTNNA1-220ENST00000520260 PNMA6EA0A0J9YXQ4 647 aa6.83□□□□□ -1.32
CTNNA1-220ENST00000520260 FGFR2P21802 821 aa6.83□□□□□ -1.32
CTNNA1-220ENST00000520260 GYG1P46976 350 aa6.83□□□□□ -1.32
CTNNA1-220ENST00000520260 CHAF1AQ13111 956 aaPredicted RBP6.83□□□□□ -1.32
CTNNA1-220ENST00000520260 CCDC102BQ68D86 513 aa6.83□□□□□ -1.32
CTNNA1-220ENST00000520260 CDC37L1Q7L3B6 337 aa6.83□□□□□ -1.32
CTNNA1-220ENST00000520260 ATG9AQ7Z3C6 839 aa6.83□□□□□ -1.32
CTNNA1-220ENST00000520260 FBXO33Q7Z6M2 555 aa6.83□□□□□ -1.32
CTNNA1-220ENST00000520260 FAM43AQ8N2R8 423 aa6.83□□□□□ -1.32
CTNNA1-220ENST00000520260 VGLL2Q8N8G2 317 aa6.83□□□□□ -1.32
CTNNA1-220ENST00000520260 SPATA5Q8NB90 893 aa6.83□□□□□ -1.32
CTNNA1-220ENST00000520260 TDRD7Q8NHU6 1098 aaKnown RBP6.83□□□□□ -1.32
CTNNA1-220ENST00000520260 KLHDC4Q8TBB5 520 aa6.83□□□□□ -1.32
CTNNA1-220ENST00000520260 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.83□□□□□ -1.32
CTNNA1-220ENST00000520260 XAGE2Q96GT9 111 aa6.83□□□□□ -1.32
CTNNA1-220ENST00000520260 FAM84BQ96KN1 310 aaPredicted RBP6.83□□□□□ -1.32
CTNNA1-220ENST00000520260 CRBNQ96SW2 442 aa6.83□□□□□ -1.32
CTNNA1-220ENST00000520260 MRIQ9BWK5 157 aa6.83□□□□□ -1.32
CTNNA1-220ENST00000520260 PUS3Q9BZE2 481 aaKnown RBP6.83□□□□□ -1.32
CTNNA1-220ENST00000520260 TAF1DQ9H5J8 278 aaPredicted RBP6.83□□□□□ -1.32
CTNNA1-220ENST00000520260 MYOZ2Q9NPC6 264 aa6.83□□□□□ -1.32
CTNNA1-220ENST00000520260 SBF1O95248 1867 aa6.83□□□□□ -1.32
CTNNA1-220ENST00000520260 TTC41PQ6P2S7 1318 aa6.82□□□□□ -1.32
CTNNA1-220ENST00000520260 LTBP1Q14766 1721 aa6.82□□□□□ -1.32
CTNNA1-220ENST00000520260 WDHD1O75717 1129 aaPredicted RBP6.82□□□□□ -1.32
CTNNA1-220ENST00000520260 ZFYP08048 801 aaPredicted RBP6.82□□□□□ -1.32
CTNNA1-220ENST00000520260 ARID4AP29374 1257 aaPredicted RBP6.82□□□□□ -1.32
CTNNA1-220ENST00000520260 APLP1P51693 650 aa6.82□□□□□ -1.32
CTNNA1-220ENST00000520260 ZNF280AP59817 542 aaPredicted RBP6.82□□□□□ -1.32
CTNNA1-220ENST00000520260 FKBP1BP68106 108 aa6.82□□□□□ -1.32
CTNNA1-220ENST00000520260 NFKBIBQ15653 356 aa6.82□□□□□ -1.32
CTNNA1-220ENST00000520260 SUPT20HL1Q3ZLR7 823 aa6.82□□□□□ -1.32
CTNNA1-220ENST00000520260 DACT2Q5SW24 774 aa6.82□□□□□ -1.32
CTNNA1-220ENST00000520260 TRIM34Q9BYJ4 488 aa6.82□□□□□ -1.32
CTNNA1-220ENST00000520260 DCTPP1Q9H773 170 aa6.82□□□□□ -1.32
CTNNA1-220ENST00000520260 RAI14Q9P0K7 980 aa6.82□□□□□ -1.32
CTNNA1-220ENST00000520260 ABCF2Q9UG63 623 aa6.82□□□□□ -1.32
CTNNA1-220ENST00000520260 TAOK2Q9UL54 1235 aa6.82□□□□□ -1.32
CTNNA1-220ENST00000520260 TTF2Q9UNY4 1162 aaKnown RBP6.82□□□□□ -1.32
CTNNA1-220ENST00000520260 PA2G4Q9UQ80 394 aaKnown RBP6.82□□□□□ -1.32
CTNNA1-220ENST00000520260 EXOC6BQ9Y2D4 811 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms