RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 GALNT11Q8NCW6 608 aa8.91□□□□□ -0.98
NPM1-206ENST00000519955 KLHDC7BQ96G42 594 aa8.91□□□□□ -0.98
NPM1-206ENST00000519955 SAMM50Q9Y512 469 aa8.91□□□□□ -0.98
NPM1-206ENST00000519955 RNF225M0QZC1 329 aaPredicted RBP8.9□□□□□ -0.98
NPM1-206ENST00000519955 TM4SF5O14894 197 aa8.9□□□□□ -0.98
NPM1-206ENST00000519955 GDF11O95390 407 aa8.9□□□□□ -0.98
NPM1-206ENST00000519955 CYP11A1P05108 521 aa8.9□□□□□ -0.98
NPM1-206ENST00000519955 SPATA31C1P0DKV0 1188 aa8.9□□□□□ -0.98
NPM1-206ENST00000519955 CD68P34810 354 aaPredicted RBP8.9□□□□□ -0.98
NPM1-206ENST00000519955 ZNF76P36508 570 aa8.9□□□□□ -0.98
NPM1-206ENST00000519955 ZNF157P51786 506 aaPredicted RBP8.9□□□□□ -0.98
NPM1-206ENST00000519955 HGSNATQ68CP4 663 aa8.9□□□□□ -0.98
NPM1-206ENST00000519955 ALYREFQ86V81 257 aaKnown RBP8.9□□□□□ -0.98
NPM1-206ENST00000519955 DLL1O00548 723 aa8.89□□□□□ -0.99
NPM1-206ENST00000519955 CELA3AP09093 270 aa8.89□□□□□ -0.99
NPM1-206ENST00000519955 NME2P22392 152 aa8.89□□□□□ -0.99
NPM1-206ENST00000519955 FANCCQ00597 558 aa8.89□□□□□ -0.99
NPM1-206ENST00000519955 HS2ST1Q7LGA3 356 aa8.89□□□□□ -0.99
NPM1-206ENST00000519955 RNF34Q969K3 372 aa8.89□□□□□ -0.99
NPM1-206ENST00000519955 FAM229AH3BQW9 127 aa8.88□□□□□ -0.99
NPM1-206ENST00000519955 TCF3P15923 654 aa8.88□□□□□ -0.99
NPM1-206ENST00000519955 SULF2Q8IWU5 870 aa8.88□□□□□ -0.99
NPM1-206ENST00000519955 TRIM56Q9BRZ2 755 aaKnown RBP8.88□□□□□ -0.99
NPM1-206ENST00000519955 EMILIN2Q9BXX0 1053 aa8.88□□□□□ -0.99
NPM1-206ENST00000519955 PWP1Q13610 501 aa8.87□□□□□ -0.99
NPM1-206ENST00000519955 FOXD4L6Q3SYB3 417 aaPredicted RBP8.87□□□□□ -0.99
NPM1-206ENST00000519955 IGF2-ASQ6U949 168 aa8.87□□□□□ -0.99
NPM1-206ENST00000519955 FOXD4L3Q6VB84 417 aaPredicted RBP8.87□□□□□ -0.99
NPM1-206ENST00000519955 CORO1BQ9BR76 489 aa8.87□□□□□ -0.99
NPM1-206ENST00000519955 RSRP1Q9BUV0 290 aa8.87□□□□□ -0.99
NPM1-206ENST00000519955 NRSN2Q9GZP1 204 aa8.87□□□□□ -0.99
NPM1-206ENST00000519955 PAGE1O75459 146 aa8.86□□□□□ -0.99
NPM1-206ENST00000519955 ARNTP27540 789 aa8.86□□□□□ -0.99
NPM1-206ENST00000519955 COL8A1P27658 744 aa8.86□□□□□ -0.99
NPM1-206ENST00000519955 NLRP12P59046 1061 aa8.86□□□□□ -0.99
NPM1-206ENST00000519955 POU4F3Q15319 338 aa8.86□□□□□ -0.99
NPM1-206ENST00000519955 HP1BP3Q5SSJ5 553 aaPredicted RBP8.86□□□□□ -0.99
NPM1-206ENST00000519955 ERMP1Q7Z2K6 904 aa8.86□□□□□ -0.99
NPM1-206ENST00000519955 NACC1Q96RE7 527 aa8.86□□□□□ -0.99
NPM1-206ENST00000519955 GGT7Q9UJ14 662 aa8.86□□□□□ -0.99
NPM1-206ENST00000519955 ADAM11O75078 769 aa8.85□□□□□ -0.99
NPM1-206ENST00000519955 LIG3P49916 1009 aa8.85□□□□□ -0.99
NPM1-206ENST00000519955 RPS26P62854 115 aaKnown RBP8.85□□□□□ -0.99
NPM1-206ENST00000519955 HNRNPUQ00839 825 aaKnown RBP eCLIP8.85□□□□□ -0.99
NPM1-206ENST00000519955 LRRC14Q15048 493 aa8.85□□□□□ -0.99
NPM1-206ENST00000519955 PCNX4Q63HM2 1172 aa8.85□□□□□ -0.99
NPM1-206ENST00000519955 TTBK2Q6IQ55 1244 aa8.85□□□□□ -0.99
NPM1-206ENST00000519955 RELL1Q8IUW5 271 aa8.85□□□□□ -0.99
NPM1-206ENST00000519955 USP26Q9BXU7 913 aa8.85□□□□□ -0.99
NPM1-206ENST00000519955 MRPL18Q9H0U6 180 aaKnown RBP8.85□□□□□ -0.99
NPM1-206ENST00000519955 IGSF5Q9NSI5 407 aa8.85□□□□□ -0.99
NPM1-206ENST00000519955 KCNK4Q9NYG8 393 aa8.85□□□□□ -0.99
NPM1-206ENST00000519955 CYP8B1Q9UNU6 501 aa8.85□□□□□ -0.99
NPM1-206ENST00000519955 DDX3YO15523 660 aaKnown RBP8.84□□□□□ -0.99
NPM1-206ENST00000519955 APBA3O96018 575 aa8.84□□□□□ -0.99
NPM1-206ENST00000519955 GSTP1P09211 210 aaKnown RBP8.84□□□□□ -0.99
NPM1-206ENST00000519955 BMP6P22004 513 aa8.84□□□□□ -0.99
NPM1-206ENST00000519955 MAOBP27338 520 aa8.84□□□□□ -0.99
NPM1-206ENST00000519955 HDLBPQ00341 1268 aaKnown RBP8.84□□□□□ -0.99
NPM1-206ENST00000519955 DUOXA2Q1HG44 320 aa8.84□□□□□ -0.99
NPM1-206ENST00000519955 SCARA3Q6AZY7 606 aa8.84□□□□□ -0.99
NPM1-206ENST00000519955 LOC100289279A0A1B0GTE1 492 aa8.83□□□□□ -1
NPM1-206ENST00000519955 GRIK4Q16099 956 aa8.83□□□□□ -1
NPM1-206ENST00000519955 MAP3K11Q16584 847 aa8.83□□□□□ -1
NPM1-206ENST00000519955 AGMOQ6ZNB7 445 aa8.83□□□□□ -1
NPM1-206ENST00000519955 PDZD3Q86UT5 571 aa8.83□□□□□ -1
NPM1-206ENST00000519955 METTL16Q86W50 562 aaKnown RBP8.83□□□□□ -1
NPM1-206ENST00000519955 CBX8Q9HC52 389 aa8.83□□□□□ -1
NPM1-206ENST00000519955 C9orf172C9J069 976 aa8.82□□□□□ -1
NPM1-206ENST00000519955 LMNB1P20700 586 aa8.82□□□□□ -1
NPM1-206ENST00000519955 NRG1Q02297 640 aaPredicted RBP8.82□□□□□ -1
NPM1-206ENST00000519955 ZNF252P-AS1Q0IIN9 211 aa8.82□□□□□ -1
NPM1-206ENST00000519955 LLGL2Q6P1M3 1020 aa8.82□□□□□ -1
NPM1-206ENST00000519955 STK35Q8TDR2 534 aa8.82□□□□□ -1
NPM1-206ENST00000519955 LENG1Q96BZ8 264 aaPredicted RBP8.82□□□□□ -1
NPM1-206ENST00000519955 TMEM74Q96NL1 305 aa8.82□□□□□ -1
NPM1-206ENST00000519955 KRT82Q9NSB4 513 aa8.82□□□□□ -1
NPM1-206ENST00000519955 SELPP16109 830 aa8.81□□□□□ -1
NPM1-206ENST00000519955 ACAD11Q709F0 780 aa8.81□□□□□ -1
NPM1-206ENST00000519955 NT5DC4Q86YG4 428 aa8.81□□□□□ -1
NPM1-206ENST00000519955 TMEM130Q8N3G9 435 aa8.81□□□□□ -1
NPM1-206ENST00000519955 PHC3Q8NDX5 983 aa8.81□□□□□ -1
NPM1-206ENST00000519955 UBASH3BQ8TF42 649 aa8.81□□□□□ -1
NPM1-206ENST00000519955 KBTBD4Q9NVX7 518 aa8.81□□□□□ -1
NPM1-206ENST00000519955 TRIM37O94972 964 aa8.8□□□□□ -1
NPM1-206ENST00000519955 WISP1O95388 367 aa8.8□□□□□ -1
NPM1-206ENST00000519955 GBP2P32456 591 aaPredicted RBP8.8□□□□□ -1
NPM1-206ENST00000519955 PDE3AQ14432 1141 aa8.8□□□□□ -1
NPM1-206ENST00000519955 SHISA2Q6UWI4 295 aa8.8□□□□□ -1
NPM1-206ENST00000519955 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.8□□□□□ -1
NPM1-206ENST00000519955 USP48Q86UV5 1035 aa8.8□□□□□ -1
NPM1-206ENST00000519955 KCNB2Q92953 911 aa8.8□□□□□ -1
NPM1-206ENST00000519955 COPRSQ9NQ92 184 aa8.8□□□□□ -1
NPM1-206ENST00000519955 USP21Q9UK80 565 aa8.8□□□□□ -1
NPM1-206ENST00000519955 MEGF11A6BM72 1044 aa8.79□□□□□ -1
NPM1-206ENST00000519955 ECEL1O95672 775 aa8.79□□□□□ -1
NPM1-206ENST00000519955 EXOSC6Q5RKV6 272 aaKnown RBP8.79□□□□□ -1
NPM1-206ENST00000519955 RASIP1Q5U651 963 aa8.79□□□□□ -1
NPM1-206ENST00000519955 C9orf131Q5VYM1 1079 aa8.79□□□□□ -1
NPM1-206ENST00000519955 MAP1SQ66K74 1059 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms