RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 CRKP46108 304 aa13.61□□□□□ -0.23
PVT1-208ENST00000519481 DZIP1LQ8IYY4 767 aaKnown RBP13.61□□□□□ -0.23
PVT1-208ENST00000519481 WNK4Q96J92 1243 aa13.61□□□□□ -0.23
PVT1-208ENST00000519481 CFHR5Q9BXR6 569 aa13.61□□□□□ -0.23
PVT1-208ENST00000519481 USP44Q9H0E7 712 aa13.61□□□□□ -0.23
PVT1-208ENST00000519481 TDRD3Q9H7E2 651 aaKnown RBP13.61□□□□□ -0.23
PVT1-208ENST00000519481 TMOD2Q9NZR1 351 aa13.61□□□□□ -0.23
PVT1-208ENST00000519481 IQSEC3Q9UPP2 1182 aaPredicted RBP13.61□□□□□ -0.23
PVT1-208ENST00000519481 HDAC5Q9UQL6 1122 aa13.61□□□□□ -0.23
PVT1-208ENST00000519481 ECM29Q5VYK3 1845 aa13.61□□□□□ -0.23
PVT1-208ENST00000519481 MAST3O60307 1309 aa13.61□□□□□ -0.23
PVT1-208ENST00000519481 CT47B1P0C2W7 299 aaPredicted RBP13.6□□□□□ -0.23
PVT1-208ENST00000519481 HDLBPQ00341 1268 aaKnown RBP13.6□□□□□ -0.23
PVT1-208ENST00000519481 PUM3Q15397 648 aaKnown RBP13.6□□□□□ -0.23
PVT1-208ENST00000519481 TEKT1Q969V4 418 aa13.6□□□□□ -0.23
PVT1-208ENST00000519481 CLMNQ96JQ2 1002 aa13.6□□□□□ -0.23
PVT1-208ENST00000519481 TCP10L2B9ZVM9 353 aa13.59□□□□□ -0.23
PVT1-208ENST00000519481 USP2O75604 605 aaPredicted RBP13.59□□□□□ -0.23
PVT1-208ENST00000519481 UBTFL1P0CB47 393 aaPredicted RBP13.59□□□□□ -0.23
PVT1-208ENST00000519481 SLC5A1P13866 664 aa13.59□□□□□ -0.23
PVT1-208ENST00000519481 IFNL1Q8IU54 200 aa13.59□□□□□ -0.23
PVT1-208ENST00000519481 KLHDC4Q8TBB5 520 aa13.59□□□□□ -0.23
PVT1-208ENST00000519481 HPS5Q9UPZ3 1129 aa13.59□□□□□ -0.23
PVT1-208ENST00000519481 SUGT1Q9Y2Z0 365 aa13.59□□□□□ -0.23
PVT1-208ENST00000519481 KIF16BQ96L93 1317 aa13.59□□□□□ -0.23
PVT1-208ENST00000519481 SSC5DA1L4H1 1573 aa13.58□□□□□ -0.23
PVT1-208ENST00000519481 EYA2O00167 538 aa13.58□□□□□ -0.24
PVT1-208ENST00000519481 BCAMP50895 628 aa13.58□□□□□ -0.24
PVT1-208ENST00000519481 SOX10P56693 466 aa13.58□□□□□ -0.24
PVT1-208ENST00000519481 FBXO46Q6PJ61 603 aaPredicted RBP13.58□□□□□ -0.24
PVT1-208ENST00000519481 VGLL2Q8N8G2 317 aa13.58□□□□□ -0.24
PVT1-208ENST00000519481 LPIN2Q92539 896 aa13.58□□□□□ -0.24
PVT1-208ENST00000519481 HOOK2Q96ED9 719 aa13.58□□□□□ -0.24
PVT1-208ENST00000519481 CDCA7LQ96GN5 454 aa13.58□□□□□ -0.24
PVT1-208ENST00000519481 API5Q9BZZ5 524 aaKnown RBP13.58□□□□□ -0.24
PVT1-208ENST00000519481 AOX1Q06278 1338 aa13.58□□□□□ -0.24
PVT1-208ENST00000519481 WDR66Q8TBY9 1149 aa13.57□□□□□ -0.24
PVT1-208ENST00000519481 MRIQ9BWK5 157 aa13.57□□□□□ -0.24
PVT1-208ENST00000519481 ELP3Q9H9T3 547 aa13.57□□□□□ -0.24
PVT1-208ENST00000519481 FBXO3Q9UK99 471 aa13.57□□□□□ -0.24
PVT1-208ENST00000519481 CSADQ9Y600 493 aa13.57□□□□□ -0.24
PVT1-208ENST00000519481 FGFR2P21802 821 aa13.56□□□□□ -0.24
PVT1-208ENST00000519481 OPTNQ96CV9 577 aa13.56□□□□□ -0.24
PVT1-208ENST00000519481 ZDHHC15Q96MV8 337 aa13.56□□□□□ -0.24
PVT1-208ENST00000519481 TMEM39BQ9GZU3 492 aa13.56□□□□□ -0.24
PVT1-208ENST00000519481 GNL3LQ9NVN8 582 aaKnown RBP13.56□□□□□ -0.24
PVT1-208ENST00000519481 CEP126Q9P2H0 1117 aa13.56□□□□□ -0.24
PVT1-208ENST00000519481 IGF2BP3O00425 579 aaKnown RBP eCLIP13.55□□□□□ -0.24
PVT1-208ENST00000519481 WDHD1O75717 1129 aaPredicted RBP13.55□□□□□ -0.24
PVT1-208ENST00000519481 MAP3K9P80192 1104 aa13.55□□□□□ -0.24
PVT1-208ENST00000519481 GRIK5Q16478 980 aa13.55□□□□□ -0.24
PVT1-208ENST00000519481 FAM83AQ86UY5 434 aa13.55□□□□□ -0.24
PVT1-208ENST00000519481 TRMT2AQ8IZ69 625 aaKnown RBP13.55□□□□□ -0.24
PVT1-208ENST00000519481 ERO1AQ96HE7 468 aa13.55□□□□□ -0.24
PVT1-208ENST00000519481 TEPSINQ96N21 525 aa13.55□□□□□ -0.24
PVT1-208ENST00000519481 SIL1Q9H173 461 aa13.55□□□□□ -0.24
PVT1-208ENST00000519481 R3HDMLQ9H3Y0 253 aa13.55□□□□□ -0.24
PVT1-208ENST00000519481 NOB1Q9ULX3 412 aaKnown RBP13.55□□□□□ -0.24
PVT1-208ENST00000519481 ARAP2Q8WZ64 1704 aa13.55□□□□□ -0.24
PVT1-208ENST00000519481 CCER2I3L3R5 266 aa13.54□□□□□ -0.24
PVT1-208ENST00000519481 CIAO1O76071 339 aa13.54□□□□□ -0.24
PVT1-208ENST00000519481 GJA5P36382 358 aa13.54□□□□□ -0.24
PVT1-208ENST00000519481 RFX5P48382 616 aaPredicted RBP13.54□□□□□ -0.24
PVT1-208ENST00000519481 GTF2A2P52657 109 aa13.54□□□□□ -0.24
PVT1-208ENST00000519481 ATP2B3Q16720 1220 aa13.54□□□□□ -0.24
PVT1-208ENST00000519481 FKBP1CQ5VVH2 108 aa13.54□□□□□ -0.24
PVT1-208ENST00000519481 HHIPL2Q6UWX4 724 aa13.54□□□□□ -0.24
PVT1-208ENST00000519481 TRIM17Q9Y577 477 aa13.54□□□□□ -0.24
PVT1-208ENST00000519481 TESPA1A2RU30 521 aaPredicted RBP13.53□□□□□ -0.24
PVT1-208ENST00000519481 IL15P40933 162 aaPredicted RBP13.53□□□□□ -0.24
PVT1-208ENST00000519481 CACNB3P54284 484 aa13.53□□□□□ -0.24
PVT1-208ENST00000519481 VGLL4Q14135 290 aa13.53□□□□□ -0.24
PVT1-208ENST00000519481 ARHGEF6Q15052 776 aa13.53□□□□□ -0.24
PVT1-208ENST00000519481 DCAF15Q66K64 600 aa13.53□□□□□ -0.24
PVT1-208ENST00000519481 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.53□□□□□ -0.24
PVT1-208ENST00000519481 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.53□□□□□ -0.24
PVT1-208ENST00000519481 CRHR2Q13324 411 aa13.52□□□□□ -0.25
PVT1-208ENST00000519481 APOBEC3HQ6NTF7 200 aaKnown RBP13.52□□□□□ -0.25
PVT1-208ENST00000519481 ATG9AQ7Z3C6 839 aa13.52□□□□□ -0.25
PVT1-208ENST00000519481 CDAN1Q8IWY9 1227 aa13.52□□□□□ -0.25
PVT1-208ENST00000519481 OTUD5Q96G74 571 aa13.52□□□□□ -0.25
PVT1-208ENST00000519481 WRNIP1Q96S55 665 aa13.52□□□□□ -0.25
PVT1-208ENST00000519481 ZFYVE28Q9HCC9 887 aa13.52□□□□□ -0.25
PVT1-208ENST00000519481 LRRFIP2Q9Y608 721 aaKnown RBP13.52□□□□□ -0.25
PVT1-208ENST00000519481 PDE4DIPQ5VU43 2346 aa13.52□□□□□ -0.25
PVT1-208ENST00000519481 CCL15-CCL14A0A0B4J2E2 113 aa13.51□□□□□ -0.25
PVT1-208ENST00000519481 SEMA3EO15041 775 aa13.51□□□□□ -0.25
PVT1-208ENST00000519481 LDHBP07195 334 aaKnown RBP13.51□□□□□ -0.25
PVT1-208ENST00000519481 GNAI3P08754 354 aa13.51□□□□□ -0.25
PVT1-208ENST00000519481 SP3Q02447 781 aa13.51□□□□□ -0.25
PVT1-208ENST00000519481 TAF1CQ15572 869 aaPredicted RBP13.51□□□□□ -0.25
PVT1-208ENST00000519481 CCL15Q16663 113 aa13.51□□□□□ -0.25
PVT1-208ENST00000519481 OTOP1Q7RTM1 612 aa13.51□□□□□ -0.25
PVT1-208ENST00000519481 ERO1BQ86YB8 467 aa13.51□□□□□ -0.25
PVT1-208ENST00000519481 ZGPATQ8N5A5 531 aaKnown RBP13.51□□□□□ -0.25
PVT1-208ENST00000519481 MS4A4AQ96JQ5 239 aa13.51□□□□□ -0.25
PVT1-208ENST00000519481 EFCC1Q9HA90 598 aa13.51□□□□□ -0.25
PVT1-208ENST00000519481 DENND2AQ9ULE3 1009 aa13.51□□□□□ -0.25
PVT1-208ENST00000519481 RPAP1Q9BWH6 1393 aaPredicted RBP13.5□□□□□ -0.25
PVT1-208ENST00000519481 SPDYE5A6NIY4 337 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms