RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 TM6SF1Q9BZW5 370 aa17.31■□□□□ 0.36
CLN8-204ENST00000519254 RAI14Q9P0K7 980 aa17.31■□□□□ 0.36
CLN8-204ENST00000519254 PPIP5K2O43314 1243 aa17.3■□□□□ 0.36
CLN8-204ENST00000519254 GRIPAP1Q4V328 841 aa17.3■□□□□ 0.36
CLN8-204ENST00000519254 ZSCAN25Q6NSZ9 544 aa17.3■□□□□ 0.36
CLN8-204ENST00000519254 PDS5AQ29RF7 1337 aaKnown RBP17.3■□□□□ 0.36
CLN8-204ENST00000519254 ZFYP08048 801 aaPredicted RBP17.3■□□□□ 0.36
CLN8-204ENST00000519254 PDE6AP16499 860 aa17.3■□□□□ 0.36
CLN8-204ENST00000519254 MAGEB6Q8N7X4 407 aa17.3■□□□□ 0.36
CLN8-204ENST00000519254 ZNF277Q9NRM2 450 aaPredicted RBP17.3■□□□□ 0.36
CLN8-204ENST00000519254 CPA1P15085 419 aa17.29■□□□□ 0.36
CLN8-204ENST00000519254 ZKSCAN1P17029 563 aaPredicted RBP17.29■□□□□ 0.36
CLN8-204ENST00000519254 CASTP20810 708 aaKnown RBP17.29■□□□□ 0.36
CLN8-204ENST00000519254 ADD2P35612 726 aa17.29■□□□□ 0.36
CLN8-204ENST00000519254 JAKMIP1Q96N16 626 aaKnown RBP17.29■□□□□ 0.36
CLN8-204ENST00000519254 PSMD1Q99460 953 aa17.29■□□□□ 0.36
CLN8-204ENST00000519254 ZSWIM6Q9HCJ5 1215 aa17.29■□□□□ 0.36
CLN8-204ENST00000519254 ZNF532Q9HCE3 1301 aa17.29■□□□□ 0.36
CLN8-204ENST00000519254 RPAP1Q9BWH6 1393 aaPredicted RBP17.28■□□□□ 0.36
CLN8-204ENST00000519254 SOCS7O14512 581 aa17.28■□□□□ 0.36
CLN8-204ENST00000519254 ECE2O60344 883 aa17.28■□□□□ 0.36
CLN8-204ENST00000519254 GTF2IP78347 998 aa17.28■□□□□ 0.36
CLN8-204ENST00000519254 KIAA2012Q0VF49 1180 aa17.28■□□□□ 0.36
CLN8-204ENST00000519254 CUL4AQ13619 759 aa17.28■□□□□ 0.36
CLN8-204ENST00000519254 TSGA10IPQ3SY00 556 aa17.28■□□□□ 0.36
CLN8-204ENST00000519254 ZGPATQ8N5A5 531 aaKnown RBP17.28■□□□□ 0.36
CLN8-204ENST00000519254 WDR66Q8TBY9 1149 aa17.28■□□□□ 0.36
CLN8-204ENST00000519254 TAF6LQ9Y6J9 622 aa17.28■□□□□ 0.36
CLN8-204ENST00000519254 MAST3O60307 1309 aa17.28■□□□□ 0.36
CLN8-204ENST00000519254 M0R2C6 588 aa17.28■□□□□ 0.36
CLN8-204ENST00000519254 PRDX5P30044 214 aa17.28■□□□□ 0.36
CLN8-204ENST00000519254 RAB3GAP1Q15042 981 aa17.28■□□□□ 0.36
CLN8-204ENST00000519254 RNF20Q5VTR2 975 aa17.28■□□□□ 0.36
CLN8-204ENST00000519254 NOL8Q76FK4 1167 aaKnown RBP17.28■□□□□ 0.36
CLN8-204ENST00000519254 APPBP2Q92624 585 aa17.28■□□□□ 0.36
CLN8-204ENST00000519254 OSBP2Q969R2 916 aa17.28■□□□□ 0.36
CLN8-204ENST00000519254 LAMA4Q16363 1823 aa17.27■□□□□ 0.36
CLN8-204ENST00000519254 CHD4Q14839 1912 aa17.27■□□□□ 0.36
CLN8-204ENST00000519254 SYT17Q9BSW7 474 aa17.27■□□□□ 0.35
CLN8-204ENST00000519254 TAOK3Q9H2K8 898 aa17.27■□□□□ 0.35
CLN8-204ENST00000519254 U3KPZ7 1027 aaPredicted RBP17.27■□□□□ 0.35
CLN8-204ENST00000519254 AK2P54819 239 aa17.26■□□□□ 0.35
CLN8-204ENST00000519254 COL9A3Q14050 684 aaPredicted RBP17.26■□□□□ 0.35
CLN8-204ENST00000519254 UBE3CQ15386 1083 aa17.26■□□□□ 0.35
CLN8-204ENST00000519254 MFSD14BQ5SR56 506 aa17.26■□□□□ 0.35
CLN8-204ENST00000519254 VPS53Q5VIR6 699 aa17.26■□□□□ 0.35
CLN8-204ENST00000519254 RUFY3Q7L099 469 aa17.26■□□□□ 0.35
CLN8-204ENST00000519254 DZIP1Q86YF9 867 aaKnown RBP17.26■□□□□ 0.35
CLN8-204ENST00000519254 LARGE2Q8N3Y3 721 aa17.26■□□□□ 0.35
CLN8-204ENST00000519254 PUS7LQ9H0K6 701 aaKnown RBP17.26■□□□□ 0.35
CLN8-204ENST00000519254 CWC22Q9HCG8 908 aaKnown RBP17.26■□□□□ 0.35
CLN8-204ENST00000519254 CYP46A1Q9Y6A2 500 aa17.26■□□□□ 0.35
CLN8-204ENST00000519254 TCRBV5S4A2TA0A5A2 114 aa17.25■□□□□ 0.35
CLN8-204ENST00000519254 ZBTB22O15209 634 aa17.25■□□□□ 0.35
CLN8-204ENST00000519254 LDHBP07195 334 aaKnown RBP17.25■□□□□ 0.35
CLN8-204ENST00000519254 CYP7A1P22680 504 aa17.25■□□□□ 0.35
CLN8-204ENST00000519254 MECOMQ03112 1051 aa17.25■□□□□ 0.35
CLN8-204ENST00000519254 GRIK5Q16478 980 aa17.25■□□□□ 0.35
CLN8-204ENST00000519254 SPTY2D1Q68D10 685 aaPredicted RBP17.25■□□□□ 0.35
CLN8-204ENST00000519254 PODNQ7Z5L7 613 aa17.25■□□□□ 0.35
CLN8-204ENST00000519254 DSCC1Q9BVC3 393 aa17.25■□□□□ 0.35
CLN8-204ENST00000519254 KCNQ5Q9NR82 932 aa17.25■□□□□ 0.35
CLN8-204ENST00000519254 SALL1Q9NSC2 1324 aa17.25■□□□□ 0.35
CLN8-204ENST00000519254 FER1L6Q2WGJ9 1857 aa17.25■□□□□ 0.35
CLN8-204ENST00000519254 HSPD1P10809 573 aaKnown RBP17.25■□□□□ 0.35
CLN8-204ENST00000519254 TTLL5Q6EMB2 1281 aa17.25■□□□□ 0.35
CLN8-204ENST00000519254 NAA16Q6N069 864 aaPredicted RBP17.25■□□□□ 0.35
CLN8-204ENST00000519254 TNPO1Q92973 898 aaKnown RBP17.25■□□□□ 0.35
CLN8-204ENST00000519254 PDRG1Q9NUG6 133 aa17.25■□□□□ 0.35
CLN8-204ENST00000519254 GOLGB1Q14789 3259 aaKnown RBP17.25■□□□□ 0.35
CLN8-204ENST00000519254 FAM205AQ6ZU69 1335 aa17.25■□□□□ 0.35
CLN8-204ENST00000519254 ARFGEF1Q9Y6D6 1849 aa17.24■□□□□ 0.35
CLN8-204ENST00000519254 NFKBIEO00221 500 aa17.24■□□□□ 0.35
CLN8-204ENST00000519254 PSMA5P28066 241 aa17.24■□□□□ 0.35
CLN8-204ENST00000519254 IARSP41252 1262 aaKnown RBP17.24■□□□□ 0.35
CLN8-204ENST00000519254 RASSF7Q02833 373 aa17.24■□□□□ 0.35
CLN8-204ENST00000519254 MIGA1Q8NAN2 632 aa17.24■□□□□ 0.35
CLN8-204ENST00000519254 TBC1D22AQ8WUA7 517 aa17.24■□□□□ 0.35
CLN8-204ENST00000519254 INTS4Q96HW7 963 aaKnown RBP17.24■□□□□ 0.35
CLN8-204ENST00000519254 MXD3Q9BW11 206 aa17.24■□□□□ 0.35
CLN8-204ENST00000519254 MAST2Q6P0Q8 1798 aa17.24■□□□□ 0.35
CLN8-204ENST00000519254 CYP21A2P08686 494 aa17.23■□□□□ 0.35
CLN8-204ENST00000519254 ADGRA1Q86SQ6 560 aa17.23■□□□□ 0.35
CLN8-204ENST00000519254 ZNF384Q8TF68 577 aa17.23■□□□□ 0.35
CLN8-204ENST00000519254 AIDAQ96BJ3 306 aa17.23■□□□□ 0.35
CLN8-204ENST00000519254 NSUN4Q96CB9 384 aaKnown RBP17.23■□□□□ 0.35
CLN8-204ENST00000519254 LIMCH1Q9UPQ0 1083 aa17.23■□□□□ 0.35
CLN8-204ENST00000519254 COL4A5P29400 1685 aa17.23■□□□□ 0.35
CLN8-204ENST00000519254 CCDC88AQ3V6T2 1871 aa17.23■□□□□ 0.35
CLN8-204ENST00000519254 F8W031 263 aaPredicted RBP17.23■□□□□ 0.35
CLN8-204ENST00000519254 GPAA1O43292 621 aa17.23■□□□□ 0.35
CLN8-204ENST00000519254 MCM4P33991 863 aa17.23■□□□□ 0.35
CLN8-204ENST00000519254 LARP6Q9BRS8 491 aaKnown RBP17.23■□□□□ 0.35
CLN8-204ENST00000519254 SCN9AQ15858 1988 aa17.22■□□□□ 0.35
CLN8-204ENST00000519254 YDJCA8MPS7 323 aa17.22■□□□□ 0.35
CLN8-204ENST00000519254 MBD4O95243 580 aa17.22■□□□□ 0.35
CLN8-204ENST00000519254 NIM1KQ8IY84 436 aa17.22■□□□□ 0.35
CLN8-204ENST00000519254 FOXP2O15409 715 aa17.21■□□□□ 0.35
CLN8-204ENST00000519254 RPS6KB1P23443 525 aa17.21■□□□□ 0.35
CLN8-204ENST00000519254 KRT32Q14532 448 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms