RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 CHD1LQ86WJ1 897 aa9.3□□□□□ -0.92
SDCBP-206ENST00000519115 XAGE2Q96GT9 111 aa9.3□□□□□ -0.92
SDCBP-206ENST00000519115 SCAF8Q9UPN6 1271 aaKnown RBP9.3□□□□□ -0.92
SDCBP-206ENST00000519115 AKAP2Q9Y2D5 859 aa9.3□□□□□ -0.92
SDCBP-206ENST00000519115 ADM5C9JUS6 153 aa9.29□□□□□ -0.92
SDCBP-206ENST00000519115 FKBP1AP62942 108 aaKnown RBP9.29□□□□□ -0.92
SDCBP-206ENST00000519115 TNNI3KQ59H18 835 aa9.29□□□□□ -0.92
SDCBP-206ENST00000519115 GORABQ5T7V8 394 aa9.29□□□□□ -0.92
SDCBP-206ENST00000519115 ANGEL2Q5VTE6 544 aaKnown RBP9.29□□□□□ -0.92
SDCBP-206ENST00000519115 CCDC102BQ68D86 513 aa9.29□□□□□ -0.92
SDCBP-206ENST00000519115 KRT26Q7Z3Y9 468 aa9.29□□□□□ -0.92
SDCBP-206ENST00000519115 USP48Q86UV5 1035 aa9.29□□□□□ -0.92
SDCBP-206ENST00000519115 TICAM2Q86XR7 235 aa9.29□□□□□ -0.92
SDCBP-206ENST00000519115 ERC1Q8IUD2 1116 aa9.29□□□□□ -0.92
SDCBP-206ENST00000519115 ZC3H15Q8WU90 426 aaKnown RBP9.29□□□□□ -0.92
SDCBP-206ENST00000519115 DCPSQ96C86 337 aaKnown RBP9.29□□□□□ -0.92
SDCBP-206ENST00000519115 BCL11AQ9H165 835 aa9.29□□□□□ -0.92
SDCBP-206ENST00000519115 GNL3LQ9NVN8 582 aaKnown RBP9.29□□□□□ -0.92
SDCBP-206ENST00000519115 ZBTB47Q9UFB7 747 aaPredicted RBP9.29□□□□□ -0.92
SDCBP-206ENST00000519115 PGAP2Q9UHJ9 254 aa9.29□□□□□ -0.92
SDCBP-206ENST00000519115 HDAC9Q9UKV0 1011 aa9.29□□□□□ -0.92
SDCBP-206ENST00000519115 TTF2Q9UNY4 1162 aaKnown RBP9.29□□□□□ -0.92
SDCBP-206ENST00000519115 FPGT-TNNI3KV9GXZ4 949 aa9.29□□□□□ -0.92
SDCBP-206ENST00000519115 AOX1Q06278 1338 aa9.29□□□□□ -0.92
SDCBP-206ENST00000519115 MAST2Q6P0Q8 1798 aa9.28□□□□□ -0.92
SDCBP-206ENST00000519115 WNT10BO00744 389 aa9.28□□□□□ -0.92
SDCBP-206ENST00000519115 RBM5P52756 815 aaKnown RBP eCLIP9.28□□□□□ -0.92
SDCBP-206ENST00000519115 RASGRF1Q13972 1273 aa9.28□□□□□ -0.92
SDCBP-206ENST00000519115 DLGAP5Q15398 846 aa9.28□□□□□ -0.92
SDCBP-206ENST00000519115 CFAP100Q494V2 611 aa9.28□□□□□ -0.92
SDCBP-206ENST00000519115 PI16Q6UXB8 463 aa9.28□□□□□ -0.92
SDCBP-206ENST00000519115 TBC1D22AQ8WUA7 517 aa9.28□□□□□ -0.92
SDCBP-206ENST00000519115 DBNDD2Q9BQY9 259 aa9.28□□□□□ -0.92
SDCBP-206ENST00000519115 OSBPL3Q9H4L5 887 aa9.28□□□□□ -0.92
SDCBP-206ENST00000519115 ZNF408Q9H9D4 720 aa9.28□□□□□ -0.92
SDCBP-206ENST00000519115 IL1RAPL2Q9NP60 686 aa9.28□□□□□ -0.92
SDCBP-206ENST00000519115 TLR7Q9NYK1 1049 aaKnown RBP9.28□□□□□ -0.92
SDCBP-206ENST00000519115 AK9Q5TCS8 1911 aa9.28□□□□□ -0.92
SDCBP-206ENST00000519115 CLRN2A0PK11 232 aa9.27□□□□□ -0.93
SDCBP-206ENST00000519115 SPDYE4A6NLX3 237 aa9.27□□□□□ -0.93
SDCBP-206ENST00000519115 PRDX5P30044 214 aa9.27□□□□□ -0.93
SDCBP-206ENST00000519115 CDC37L1Q7L3B6 337 aa9.27□□□□□ -0.93
SDCBP-206ENST00000519115 SULF1Q8IWU6 871 aa9.27□□□□□ -0.93
SDCBP-206ENST00000519115 WDR66Q8TBY9 1149 aa9.27□□□□□ -0.93
SDCBP-206ENST00000519115 KIF1BPQ96EK5 621 aa9.27□□□□□ -0.93
SDCBP-206ENST00000519115 ZBED3Q96IU2 234 aaPredicted RBP9.27□□□□□ -0.93
SDCBP-206ENST00000519115 CCDC8Q9H0W5 538 aaPredicted RBP9.27□□□□□ -0.93
SDCBP-206ENST00000519115 DBNLQ9UJU6 430 aaKnown RBP9.27□□□□□ -0.93
SDCBP-206ENST00000519115 DENND2AQ9ULE3 1009 aa9.27□□□□□ -0.93
SDCBP-206ENST00000519115 TMEM88BA6NKF7 163 aa9.26□□□□□ -0.93
SDCBP-206ENST00000519115 SEMA3EO15041 775 aa9.26□□□□□ -0.93
SDCBP-206ENST00000519115 CELF2O95319 508 aaKnown RBP9.26□□□□□ -0.93
SDCBP-206ENST00000519115 ARID4AP29374 1257 aaPredicted RBP9.26□□□□□ -0.93
SDCBP-206ENST00000519115 CRKP46108 304 aa9.26□□□□□ -0.93
SDCBP-206ENST00000519115 ANKRD45Q5TZF3 282 aa9.26□□□□□ -0.93
SDCBP-206ENST00000519115 CST9Q5W186 159 aa9.26□□□□□ -0.93
SDCBP-206ENST00000519115 AACSQ86V21 672 aa9.26□□□□□ -0.93
SDCBP-206ENST00000519115 RHPN1Q8TCX5 695 aa9.26□□□□□ -0.93
SDCBP-206ENST00000519115 EAF2Q96CJ1 260 aaPredicted RBP9.26□□□□□ -0.93
SDCBP-206ENST00000519115 PRMT6Q96LA8 375 aaPredicted RBP9.26□□□□□ -0.93
SDCBP-206ENST00000519115 LRRCC1Q9C099 1032 aa9.26□□□□□ -0.93
SDCBP-206ENST00000519115 GPR108Q9NPR9 543 aa9.26□□□□□ -0.93
SDCBP-206ENST00000519115 SNRKQ9NRH2 765 aa9.26□□□□□ -0.93
SDCBP-206ENST00000519115 CREBZFQ9NS37 354 aa9.26□□□□□ -0.93
SDCBP-206ENST00000519115 SSUH2Q9Y2M2 353 aa9.26□□□□□ -0.93
SDCBP-206ENST00000519115 PITPNM2Q9BZ72 1349 aa9.26□□□□□ -0.93
SDCBP-206ENST00000519115 DOCK2Q92608 1830 aa9.26□□□□□ -0.93
SDCBP-206ENST00000519115 MYH7P12883 1935 aa9.25□□□□□ -0.93
SDCBP-206ENST00000519115 LDHBP07195 334 aaKnown RBP9.25□□□□□ -0.93
SDCBP-206ENST00000519115 MCAMP43121 646 aa9.25□□□□□ -0.93
SDCBP-206ENST00000519115 MMP14P50281 582 aa9.25□□□□□ -0.93
SDCBP-206ENST00000519115 DIXDC1Q155Q3 683 aa9.25□□□□□ -0.93
SDCBP-206ENST00000519115 TTC39AQ5SRH9 613 aa9.25□□□□□ -0.93
SDCBP-206ENST00000519115 PRAMEF18Q5VWM3 479 aa9.25□□□□□ -0.93
SDCBP-206ENST00000519115 MTMR14Q8NCE2 650 aa9.25□□□□□ -0.93
SDCBP-206ENST00000519115 TEKT1Q969V4 418 aa9.25□□□□□ -0.93
SDCBP-206ENST00000519115 CDCA5Q96FF9 252 aa9.25□□□□□ -0.93
SDCBP-206ENST00000519115 VEZTQ9HBM0 779 aa9.25□□□□□ -0.93
SDCBP-206ENST00000519115 HMG20BQ9P0W2 317 aa9.25□□□□□ -0.93
SDCBP-206ENST00000519115 ABCF2Q9UG63 623 aa9.25□□□□□ -0.93
SDCBP-206ENST00000519115 STAP2Q9UGK3 403 aa9.25□□□□□ -0.93
SDCBP-206ENST00000519115 MKRN1Q9UHC7 482 aaKnown RBP9.25□□□□□ -0.93
SDCBP-206ENST00000519115 SERPINA10Q9UK55 444 aa9.25□□□□□ -0.93
SDCBP-206ENST00000519115 ABT1Q9ULW3 272 aaKnown RBP9.25□□□□□ -0.93
SDCBP-206ENST00000519115 CDK5RAP2Q96SN8 1893 aa9.25□□□□□ -0.93
SDCBP-206ENST00000519115 MAST3O60307 1309 aa9.25□□□□□ -0.93
SDCBP-206ENST00000519115 PAPPA2Q9BXP8 1791 aa9.24□□□□□ -0.93
SDCBP-206ENST00000519115 OTOFQ9HC10 1997 aa9.24□□□□□ -0.93
SDCBP-206ENST00000519115 MYO1BO43795 1136 aa9.24□□□□□ -0.93
SDCBP-206ENST00000519115 SMARCA5O60264 1052 aaPredicted RBP9.24□□□□□ -0.93
SDCBP-206ENST00000519115 UQCRFS1P1P0C7P4 283 aa9.24□□□□□ -0.93
SDCBP-206ENST00000519115 BMP2KLQ5H9B9 411 aa9.24□□□□□ -0.93
SDCBP-206ENST00000519115 CCDC158Q5M9N0 1113 aa9.24□□□□□ -0.93
SDCBP-206ENST00000519115 TBC1D9Q6ZT07 1266 aa9.24□□□□□ -0.93
SDCBP-206ENST00000519115 APOBEC3FQ8IUX4 373 aaKnown RBP9.24□□□□□ -0.93
SDCBP-206ENST00000519115 DNAJC5GQ8N7S2 189 aa9.24□□□□□ -0.93
SDCBP-206ENST00000519115 SPATA5Q8NB90 893 aa9.24□□□□□ -0.93
SDCBP-206ENST00000519115 TDRD3Q9H7E2 651 aaKnown RBP9.24□□□□□ -0.93
SDCBP-206ENST00000519115 ZNF70Q9UC06 446 aaPredicted RBP9.24□□□□□ -0.93
SDCBP-206ENST00000519115 SUGT1Q9Y2Z0 365 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms