RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 DDX41Q9UJV9 622 aaKnown RBP19.25■□□□□ 0.67
PCDHGA11-202ENST00000518882 DENND2AQ9ULE3 1009 aa19.25■□□□□ 0.67
PCDHGA11-202ENST00000518882 MYO5AQ9Y4I1 1855 aaKnown RBP19.25■□□□□ 0.67
PCDHGA11-202ENST00000518882 ECM29Q5VYK3 1845 aa19.24■□□□□ 0.67
PCDHGA11-202ENST00000518882 IGSF3O75054 1194 aa19.24■□□□□ 0.67
PCDHGA11-202ENST00000518882 WDHD1O75717 1129 aaPredicted RBP19.24■□□□□ 0.67
PCDHGA11-202ENST00000518882 SLC3A2P08195 630 aaKnown RBP19.24■□□□□ 0.67
PCDHGA11-202ENST00000518882 KIF23Q02241 960 aaPredicted RBP19.24■□□□□ 0.67
PCDHGA11-202ENST00000518882 TMC6Q7Z403 805 aa19.24■□□□□ 0.67
PCDHGA11-202ENST00000518882 BRAPQ7Z569 592 aa19.24■□□□□ 0.67
PCDHGA11-202ENST00000518882 AKAP11Q9UKA4 1901 aa19.24■□□□□ 0.67
PCDHGA11-202ENST00000518882 PFKFB1P16118 471 aa19.23■□□□□ 0.67
PCDHGA11-202ENST00000518882 CCDC57Q2TAC2 916 aa19.23■□□□□ 0.67
PCDHGA11-202ENST00000518882 KMT5BQ4FZB7 885 aa19.23■□□□□ 0.67
PCDHGA11-202ENST00000518882 AIFM3Q96NN9 605 aa19.23■□□□□ 0.67
PCDHGA11-202ENST00000518882 PAPPAQ13219 1627 aa19.23■□□□□ 0.67
PCDHGA11-202ENST00000518882 CPLX1O14810 134 aa19.23■□□□□ 0.67
PCDHGA11-202ENST00000518882 DHX16O60231 1041 aaKnown RBP19.23■□□□□ 0.67
PCDHGA11-202ENST00000518882 ZFYP08048 801 aaPredicted RBP19.23■□□□□ 0.67
PCDHGA11-202ENST00000518882 NLRP12P59046 1061 aa19.23■□□□□ 0.67
PCDHGA11-202ENST00000518882 ZRSR1Q15695 479 aaKnown RBP19.23■□□□□ 0.67
PCDHGA11-202ENST00000518882 ANO1Q5XXA6 986 aa19.23■□□□□ 0.67
PCDHGA11-202ENST00000518882 ISM2Q6H9L7 571 aa19.23■□□□□ 0.67
PCDHGA11-202ENST00000518882 NCOA7Q8NI08 942 aa19.23■□□□□ 0.67
PCDHGA11-202ENST00000518882 KIF18AQ8NI77 898 aa19.23■□□□□ 0.67
PCDHGA11-202ENST00000518882 APPBP2Q92624 585 aa19.23■□□□□ 0.67
PCDHGA11-202ENST00000518882 NBPF3Q9H094 633 aa19.23■□□□□ 0.67
PCDHGA11-202ENST00000518882 SYTL4Q96C24 671 aaPredicted RBP19.22■□□□□ 0.67
PCDHGA11-202ENST00000518882 GPAA1O43292 621 aa19.22■□□□□ 0.67
PCDHGA11-202ENST00000518882 MARCKSP29966 332 aaPredicted RBP19.22■□□□□ 0.67
PCDHGA11-202ENST00000518882 SYNE3Q6ZMZ3 975 aa19.22■□□□□ 0.67
PCDHGA11-202ENST00000518882 CMA1P23946 247 aa19.21■□□□□ 0.67
PCDHGA11-202ENST00000518882 ELF2Q15723 593 aa19.21■□□□□ 0.67
PCDHGA11-202ENST00000518882 LRRFIP1Q32MZ4 808 aaKnown RBP19.21■□□□□ 0.67
PCDHGA11-202ENST00000518882 RALYLQ86SE5 291 aaKnown RBP19.21■□□□□ 0.67
PCDHGA11-202ENST00000518882 PPP1R13BQ96KQ4 1090 aa19.21■□□□□ 0.67
PCDHGA11-202ENST00000518882 ISCA1Q9BUE6 129 aa19.21■□□□□ 0.67
PCDHGA11-202ENST00000518882 HSD3B7Q9H2F3 369 aa19.21■□□□□ 0.67
PCDHGA11-202ENST00000518882 ZNF213O14771 459 aa19.21■□□□□ 0.67
PCDHGA11-202ENST00000518882 ERO1AQ96HE7 468 aa19.21■□□□□ 0.67
PCDHGA11-202ENST00000518882 DNAJC5Q9H3Z4 198 aa19.21■□□□□ 0.67
PCDHGA11-202ENST00000518882 TNS3Q68CZ2 1445 aa19.21■□□□□ 0.67
PCDHGA11-202ENST00000518882 CPDO75976 1380 aa19.2■□□□□ 0.66
PCDHGA11-202ENST00000518882 ATP1A3P13637 1013 aa19.2■□□□□ 0.66
PCDHGA11-202ENST00000518882 ATF3P18847 181 aa19.2■□□□□ 0.66
PCDHGA11-202ENST00000518882 LMOD1P29536 600 aaPredicted RBP19.2■□□□□ 0.66
PCDHGA11-202ENST00000518882 AKAP2Q9Y2D5 859 aa19.2■□□□□ 0.66
PCDHGA11-202ENST00000518882 FBXO38Q6PIJ6 1188 aa19.2■□□□□ 0.66
PCDHGA11-202ENST00000518882 CCDC150Q8NCX0 1101 aa19.2■□□□□ 0.66
PCDHGA11-202ENST00000518882 ZNF397Q8NF99 534 aaPredicted RBP19.2■□□□□ 0.66
PCDHGA11-202ENST00000518882 FAM89AQ96GI7 184 aa19.2■□□□□ 0.66
PCDHGA11-202ENST00000518882 MORC2Q9Y6X9 1032 aaPredicted RBP19.2■□□□□ 0.66
PCDHGA11-202ENST00000518882 PCDH11XQ9BZA7 1347 aa19.19■□□□□ 0.66
PCDHGA11-202ENST00000518882 PCDH11YQ9BZA8 1340 aa19.19■□□□□ 0.66
PCDHGA11-202ENST00000518882 RXRAP19793 462 aa19.19■□□□□ 0.66
PCDHGA11-202ENST00000518882 SLC39A14Q15043 492 aa19.19■□□□□ 0.66
PCDHGA11-202ENST00000518882 ZCRB1Q8TBF4 217 aaKnown RBP19.19■□□□□ 0.66
PCDHGA11-202ENST00000518882 TAOK2Q9UL54 1235 aa19.19■□□□□ 0.66
PCDHGA11-202ENST00000518882 RIC1Q4ADV7 1423 aa19.19■□□□□ 0.66
PCDHGA11-202ENST00000518882 SLU7O95391 586 aaKnown RBP19.18■□□□□ 0.66
PCDHGA11-202ENST00000518882 SFPQP23246 707 aaKnown RBP eCLIP19.18■□□□□ 0.66
PCDHGA11-202ENST00000518882 MCAMP43121 646 aa19.18■□□□□ 0.66
PCDHGA11-202ENST00000518882 CYB5R4Q7L1T6 521 aa19.18■□□□□ 0.66
PCDHGA11-202ENST00000518882 TBC1D10CQ8IV04 446 aa19.18■□□□□ 0.66
PCDHGA11-202ENST00000518882 SENP2Q9HC62 589 aa19.18■□□□□ 0.66
PCDHGA11-202ENST00000518882 ZNF330Q9Y3S2 320 aaPredicted RBP19.18■□□□□ 0.66
PCDHGA11-202ENST00000518882 ERVV-2B6SEH9 535 aa19.18■□□□□ 0.66
PCDHGA11-202ENST00000518882 FANCCQ00597 558 aa19.18■□□□□ 0.66
PCDHGA11-202ENST00000518882 TCIRG1Q13488 830 aa19.18■□□□□ 0.66
PCDHGA11-202ENST00000518882 LRRN4CLQ8ND94 238 aa19.18■□□□□ 0.66
PCDHGA11-202ENST00000518882 SHC4Q6S5L8 630 aa19.17■□□□□ 0.66
PCDHGA11-202ENST00000518882 SYT10Q6XYQ8 523 aa19.17■□□□□ 0.66
PCDHGA11-202ENST00000518882 VPS37DQ86XT2 251 aa19.17■□□□□ 0.66
PCDHGA11-202ENST00000518882 SYNE4Q8N205 404 aa19.17■□□□□ 0.66
PCDHGA11-202ENST00000518882 ALG1Q9BT22 464 aa19.17■□□□□ 0.66
PCDHGA11-202ENST00000518882 ZMYM6O95789 1325 aa19.17■□□□□ 0.66
PCDHGA11-202ENST00000518882 WDR19Q8NEZ3 1342 aa19.17■□□□□ 0.66
PCDHGA11-202ENST00000518882 SHANK3Q9BYB0 1731 aa19.17■□□□□ 0.66
PCDHGA11-202ENST00000518882 PSDA5PKW4 1024 aaPredicted RBP19.17■□□□□ 0.66
PCDHGA11-202ENST00000518882 KIF2AO00139 706 aaPredicted RBP19.17■□□□□ 0.66
PCDHGA11-202ENST00000518882 CDC27P30260 824 aa19.17■□□□□ 0.66
PCDHGA11-202ENST00000518882 SYKP43405 635 aa19.17■□□□□ 0.66
PCDHGA11-202ENST00000518882 DPF2Q92785 391 aa19.17■□□□□ 0.66
PCDHGA11-202ENST00000518882 L2HGDHQ9H9P8 463 aa19.17■□□□□ 0.66
PCDHGA11-202ENST00000518882 ANGEL1Q9UNK9 670 aaKnown RBP19.17■□□□□ 0.66
PCDHGA11-202ENST00000518882 HPSEQ9Y251 543 aa19.17■□□□□ 0.66
PCDHGA11-202ENST00000518882 STRCP1A6NGW2 1772 aa19.17■□□□□ 0.66
PCDHGA11-202ENST00000518882 PTPAQ15257 358 aa19.16■□□□□ 0.66
PCDHGA11-202ENST00000518882 TAF7LQ5H9L4 462 aa19.16■□□□□ 0.66
PCDHGA11-202ENST00000518882 KRT40Q6A162 431 aa19.16■□□□□ 0.66
PCDHGA11-202ENST00000518882 PHKBQ93100 1093 aa19.16■□□□□ 0.66
PCDHGA11-202ENST00000518882 TUBE1Q9UJT0 475 aa19.16■□□□□ 0.66
PCDHGA11-202ENST00000518882 FBXO3Q9UK99 471 aa19.16■□□□□ 0.66
PCDHGA11-202ENST00000518882 IKBKBO14920 756 aa19.16■□□□□ 0.66
PCDHGA11-202ENST00000518882 NPHP1O15259 732 aa19.16■□□□□ 0.66
PCDHGA11-202ENST00000518882 KIF20AO95235 890 aa19.16■□□□□ 0.66
PCDHGA11-202ENST00000518882 TPM4P67936 248 aa19.16■□□□□ 0.66
PCDHGA11-202ENST00000518882 PNOCQ13519 176 aa19.16■□□□□ 0.66
PCDHGA11-202ENST00000518882 TNS2Q63HR2 1409 aa19.16■□□□□ 0.66
PCDHGA11-202ENST00000518882 CSF1RP07333 972 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms