RNA–Protein interactions for RNA: ENST00000518815.1

MTCL1-207, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best) BASIC

Gene MTCL1, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-207ENST00000518815 PLA2G12BQ9BX93 195 aa11.7□□□□□ -0.54
MTCL1-207ENST00000518815 E7EWF7 191 aa11.7□□□□□ -0.54
MTCL1-207ENST00000518815 RFC4P35249 363 aa11.7□□□□□ -0.54
MTCL1-207ENST00000518815 ZSCAN29Q8IWY8 852 aaPredicted RBP11.7□□□□□ -0.54
MTCL1-207ENST00000518815 HOOK1Q9UJC3 728 aaKnown RBP11.7□□□□□ -0.54
MTCL1-207ENST00000518815 SLC4A8Q2Y0W8 1093 aa11.7□□□□□ -0.54
MTCL1-207ENST00000518815 JMYQ8N9B5 988 aa11.7□□□□□ -0.54
MTCL1-207ENST00000518815 TSC1Q92574 1164 aa11.7□□□□□ -0.54
MTCL1-207ENST00000518815 TRIM5Q9C035 493 aa11.7□□□□□ -0.54
MTCL1-207ENST00000518815 MAP3K15Q6ZN16 1313 aa11.7□□□□□ -0.54
MTCL1-207ENST00000518815 ZNF609O15014 1411 aa11.7□□□□□ -0.54
MTCL1-207ENST00000518815 AFF2P51816 1311 aa11.69□□□□□ -0.54
MTCL1-207ENST00000518815 FAM98CQ17RN3 349 aaKnown RBP11.69□□□□□ -0.54
MTCL1-207ENST00000518815 LRRC24Q50LG9 513 aa11.69□□□□□ -0.54
MTCL1-207ENST00000518815 C8orf76Q96K31 380 aa11.69□□□□□ -0.54
MTCL1-207ENST00000518815 GJD4Q96KN9 370 aaPredicted RBP11.69□□□□□ -0.54
MTCL1-207ENST00000518815 CDC5LQ99459 802 aaKnown RBP11.69□□□□□ -0.54
MTCL1-207ENST00000518815 CDHR2Q9BYE9 1310 aa11.69□□□□□ -0.54
MTCL1-207ENST00000518815 C6orf229H3BNL8 230 aa11.69□□□□□ -0.54
MTCL1-207ENST00000518815 ONECUT3O60422 494 aaPredicted RBP11.69□□□□□ -0.54
MTCL1-207ENST00000518815 APOBRQ0VD83 1088 aa11.69□□□□□ -0.54
MTCL1-207ENST00000518815 GIGYF2Q6Y7W6 1299 aaKnown RBP11.69□□□□□ -0.54
MTCL1-207ENST00000518815 ZNF594Q96JF6 807 aaPredicted RBP11.69□□□□□ -0.54
MTCL1-207ENST00000518815 SEC62Q99442 399 aaKnown RBP11.69□□□□□ -0.54
MTCL1-207ENST00000518815 RANBP6O60518 1105 aaKnown RBP11.69□□□□□ -0.54
MTCL1-207ENST00000518815 CAMK4Q16566 473 aa11.69□□□□□ -0.54
MTCL1-207ENST00000518815 ANO10Q9NW15 660 aa11.69□□□□□ -0.54
MTCL1-207ENST00000518815 IRS4O14654 1257 aaPredicted RBP11.69□□□□□ -0.54
MTCL1-207ENST00000518815 STX1AQ16623 288 aa11.69□□□□□ -0.54
MTCL1-207ENST00000518815 DZIP1Q86YF9 867 aaKnown RBP11.69□□□□□ -0.54
MTCL1-207ENST00000518815 CCDC144CPQ8IYA2 1237 aa11.69□□□□□ -0.54
MTCL1-207ENST00000518815 ASAP1Q9ULH1 1129 aa11.69□□□□□ -0.54
MTCL1-207ENST00000518815 NDUFB9Q9Y6M9 179 aa11.69□□□□□ -0.54
MTCL1-207ENST00000518815 MAST3O60307 1309 aa11.68□□□□□ -0.54
MTCL1-207ENST00000518815 RPGRQ92834 1020 aaKnown RBP11.68□□□□□ -0.54
MTCL1-207ENST00000518815 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.68□□□□□ -0.54
MTCL1-207ENST00000518815 ARFGEF2Q9Y6D5 1785 aa11.68□□□□□ -0.54
MTCL1-207ENST00000518815 GOLGA8BA8MQT2 603 aa11.68□□□□□ -0.54
MTCL1-207ENST00000518815 PDE8AO60658 829 aa11.68□□□□□ -0.54
MTCL1-207ENST00000518815 JAK2O60674 1132 aa11.68□□□□□ -0.54
MTCL1-207ENST00000518815 USP5P45974 858 aa11.68□□□□□ -0.54
MTCL1-207ENST00000518815 CEP57L1Q8IYX8 460 aa11.68□□□□□ -0.54
MTCL1-207ENST00000518815 SMARCC2Q8TAQ2 1214 aa11.68□□□□□ -0.54
MTCL1-207ENST00000518815 PRIMPOLQ96LW4 560 aa11.68□□□□□ -0.54
MTCL1-207ENST00000518815 TTC12Q9H892 705 aaPredicted RBP11.68□□□□□ -0.54
MTCL1-207ENST00000518815 PRC1O43663 620 aa11.68□□□□□ -0.54
MTCL1-207ENST00000518815 HMGB2P26583 209 aaKnown RBP11.68□□□□□ -0.54
MTCL1-207ENST00000518815 SCRN1Q12765 414 aa11.68□□□□□ -0.54
MTCL1-207ENST00000518815 RESTQ13127 1097 aa11.68□□□□□ -0.54
MTCL1-207ENST00000518815 BRAPQ7Z569 592 aa11.68□□□□□ -0.54
MTCL1-207ENST00000518815 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.68□□□□□ -0.54
MTCL1-207ENST00000518815 CCAR1Q8IX12 1150 aaKnown RBP11.68□□□□□ -0.54
MTCL1-207ENST00000518815 KCNG4Q8TDN1 519 aa11.68□□□□□ -0.54
MTCL1-207ENST00000518815 WASF1Q92558 559 aa11.68□□□□□ -0.54
MTCL1-207ENST00000518815 PCMTD1Q96MG8 357 aaPredicted RBP11.68□□□□□ -0.54
MTCL1-207ENST00000518815 ZNF165P49910 485 aa11.67□□□□□ -0.54
MTCL1-207ENST00000518815 CCDC152Q4G0S7 254 aa11.67□□□□□ -0.54
MTCL1-207ENST00000518815 WDR19Q8NEZ3 1342 aa11.67□□□□□ -0.54
MTCL1-207ENST00000518815 CKAP2LQ8IYA6 745 aa11.67□□□□□ -0.54
MTCL1-207ENST00000518815 SETDB2Q96T68 719 aa11.67□□□□□ -0.54
MTCL1-207ENST00000518815 KLF18A0A0U1RQI7 1052 aa11.67□□□□□ -0.54
MTCL1-207ENST00000518815 IFIT3O14879 490 aaKnown RBP11.67□□□□□ -0.54
MTCL1-207ENST00000518815 ITGA6P23229 1130 aa11.67□□□□□ -0.54
MTCL1-207ENST00000518815 SLC9C2Q5TAH2 1124 aa11.67□□□□□ -0.54
MTCL1-207ENST00000518815 NSUN7Q8NE18 718 aaKnown RBP11.67□□□□□ -0.54
MTCL1-207ENST00000518815 ORC3Q9UBD5 711 aaPredicted RBP11.67□□□□□ -0.54
MTCL1-207ENST00000518815 TJP1Q07157 1748 aa11.66□□□□□ -0.54
MTCL1-207ENST00000518815 NUP188Q5SRE5 1749 aa11.66□□□□□ -0.54
MTCL1-207ENST00000518815 NEMFO60524 1076 aa11.66□□□□□ -0.54
MTCL1-207ENST00000518815 ANO6Q4KMQ2 910 aa11.66□□□□□ -0.54
MTCL1-207ENST00000518815 C17orf53Q8N3J3 647 aaPredicted RBP11.66□□□□□ -0.54
MTCL1-207ENST00000518815 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.66□□□□□ -0.54
MTCL1-207ENST00000518815 NHSQ6T4R5 1651 aa11.66□□□□□ -0.54
MTCL1-207ENST00000518815 CTSWP56202 376 aa11.66□□□□□ -0.54
MTCL1-207ENST00000518815 TSR1Q2NL82 804 aaKnown RBP11.66□□□□□ -0.54
MTCL1-207ENST00000518815 CHST3Q7LGC8 479 aa11.66□□□□□ -0.54
MTCL1-207ENST00000518815 MICU3Q86XE3 530 aa11.66□□□□□ -0.54
MTCL1-207ENST00000518815 MKNK2Q9HBH9 465 aa11.66□□□□□ -0.54
MTCL1-207ENST00000518815 TCEAL9Q9UHQ7 104 aa11.66□□□□□ -0.54
MTCL1-207ENST00000518815 ERVV-1B6SEH8 477 aa11.66□□□□□ -0.54
MTCL1-207ENST00000518815 DYNC1I1O14576 645 aa11.66□□□□□ -0.54
MTCL1-207ENST00000518815 POLR3DP05423 398 aaPredicted RBP11.66□□□□□ -0.54
MTCL1-207ENST00000518815 LIG1P18858 919 aa11.66□□□□□ -0.54
MTCL1-207ENST00000518815 ANKRD18AQ8IVF6 992 aa11.66□□□□□ -0.54
MTCL1-207ENST00000518815 CCDC47Q96A33 483 aaKnown RBP11.66□□□□□ -0.54
MTCL1-207ENST00000518815 NLRP3Q96P20 1036 aa11.66□□□□□ -0.54
MTCL1-207ENST00000518815 MROH5Q6ZUA9 1318 aa11.65□□□□□ -0.54
MTCL1-207ENST00000518815 EXOSC10Q01780 885 aaKnown RBP11.65□□□□□ -0.54
MTCL1-207ENST00000518815 ST3GAL1Q11201 340 aa11.65□□□□□ -0.54
MTCL1-207ENST00000518815 NOLC1Q14978 699 aaKnown RBP eCLIP11.65□□□□□ -0.54
MTCL1-207ENST00000518815 FAM173BQ6P4H8 233 aa11.65□□□□□ -0.54
MTCL1-207ENST00000518815 CCAR2Q8N163 923 aaKnown RBP11.65□□□□□ -0.54
MTCL1-207ENST00000518815 CCDC24Q8N4L8 307 aa11.65□□□□□ -0.54
MTCL1-207ENST00000518815 FSIP1Q8NA03 581 aa11.65□□□□□ -0.54
MTCL1-207ENST00000518815 PUS3Q9BZE2 481 aaKnown RBP11.65□□□□□ -0.54
MTCL1-207ENST00000518815 RREB1Q92766 1687 aa11.65□□□□□ -0.54
MTCL1-207ENST00000518815 GPAA1O43292 621 aa11.65□□□□□ -0.54
MTCL1-207ENST00000518815 TPM1P09493 284 aa11.65□□□□□ -0.54
MTCL1-207ENST00000518815 PDIA3P30101 505 aaKnown RBP11.65□□□□□ -0.54
MTCL1-207ENST00000518815 TNNT3P45378 269 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms