RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 ARMT1Q9H993 441 aa31.31■■■□□ 2.6
COL13A1-210ENST00000517713 ZMYM6O95789 1325 aa31.31■■■□□ 2.6
COL13A1-210ENST00000517713 BRWD3Q6RI45 1802 aa31.31■■■□□ 2.6
COL13A1-210ENST00000517713 WDR19Q8NEZ3 1342 aa31.31■■■□□ 2.6
COL13A1-210ENST00000517713 NAP1L2Q9ULW6 460 aaPredicted RBP31.31■■■□□ 2.6
COL13A1-210ENST00000517713 GADD45BO75293 160 aaPredicted RBP31.3■■■□□ 2.6
COL13A1-210ENST00000517713 TRDNQ13061 729 aa31.3■■■□□ 2.6
COL13A1-210ENST00000517713 TNRC6CQ9HCJ0 1690 aaKnown RBP31.3■■■□□ 2.6
COL13A1-210ENST00000517713 UBR3Q6ZT12 1888 aa31.29■■■□□ 2.6
COL13A1-210ENST00000517713 DNM1Q05193 864 aaKnown RBP31.29■■■□□ 2.6
COL13A1-210ENST00000517713 IFNL3Q8IZI9 196 aa31.29■■■□□ 2.6
COL13A1-210ENST00000517713 NSUN7Q8NE18 718 aaKnown RBP31.29■■■□□ 2.6
COL13A1-210ENST00000517713 CHMP4CQ96CF2 233 aa31.29■■■□□ 2.6
COL13A1-210ENST00000517713 TMEM63CQ9P1W3 806 aa31.29■■■□□ 2.6
COL13A1-210ENST00000517713 BRPF3Q9ULD4 1205 aa31.29■■■□□ 2.6
COL13A1-210ENST00000517713 DENND2AQ9ULE3 1009 aa31.29■■■□□ 2.6
COL13A1-210ENST00000517713 TRIM37O94972 964 aa31.29■■■□□ 2.6
COL13A1-210ENST00000517713 ANTXR2P58335 489 aa31.29■■■□□ 2.6
COL13A1-210ENST00000517713 CCT2P78371 535 aaKnown RBP31.29■■■□□ 2.6
COL13A1-210ENST00000517713 TBC1D10CQ8IV04 446 aa31.29■■■□□ 2.6
COL13A1-210ENST00000517713 PNPLA7Q6ZV29 1317 aa31.28■■■□□ 2.6
COL13A1-210ENST00000517713 GNAT2P19087 354 aa31.28■■■□□ 2.6
COL13A1-210ENST00000517713 FBXO33Q7Z6M2 555 aa31.28■■■□□ 2.6
COL13A1-210ENST00000517713 CNBD1Q8NA66 436 aa31.28■■■□□ 2.6
COL13A1-210ENST00000517713 DDX11Q96FC9 970 aa31.28■■■□□ 2.6
COL13A1-210ENST00000517713 GPHNQ9NQX3 736 aaPredicted RBP31.28■■■□□ 2.6
COL13A1-210ENST00000517713 ABCF2Q9UG63 623 aa31.28■■■□□ 2.6
COL13A1-210ENST00000517713 COL1A1P02452 1464 aaPredicted RBP31.28■■■□□ 2.6
COL13A1-210ENST00000517713 CTDNEP1O95476 244 aa31.27■■■□□ 2.6
COL13A1-210ENST00000517713 CSPP1Q1MSJ5 1256 aa31.27■■■□□ 2.6
COL13A1-210ENST00000517713 FAM184AQ8NB25 1140 aa31.27■■■□□ 2.6
COL13A1-210ENST00000517713 NAPBQ9H115 298 aa31.27■■■□□ 2.6
COL13A1-210ENST00000517713 EPB41L4AQ9HCS5 686 aaPredicted RBP31.27■■■□□ 2.6
COL13A1-210ENST00000517713 HMGN5P82970 282 aaKnown RBP31.27■■■□□ 2.6
COL13A1-210ENST00000517713 FIBPO43427 364 aa31.26■■■□□ 2.59
COL13A1-210ENST00000517713 FERMT3Q86UX7 667 aa31.26■■■□□ 2.59
COL13A1-210ENST00000517713 LCORLQ8N3X6 602 aa31.26■■■□□ 2.59
COL13A1-210ENST00000517713 NCOA5Q9HCD5 579 aaKnown RBP31.26■■■□□ 2.59
COL13A1-210ENST00000517713 GSG1L2A8MUP6 293 aa31.25■■■□□ 2.59
COL13A1-210ENST00000517713 SEMA3EO15041 775 aa31.25■■■□□ 2.59
COL13A1-210ENST00000517713 CYP7A1P22680 504 aa31.25■■■□□ 2.59
COL13A1-210ENST00000517713 RAI14Q9P0K7 980 aa31.25■■■□□ 2.59
COL13A1-210ENST00000517713 PTPDC1A2A3K4 754 aa31.25■■■□□ 2.59
COL13A1-210ENST00000517713 KLRK1P26718 216 aa31.24■■■□□ 2.59
COL13A1-210ENST00000517713 SLC4A4Q9Y6R1 1079 aa31.24■■■□□ 2.59
COL13A1-210ENST00000517713 GYS1P13807 737 aa31.24■■■□□ 2.59
COL13A1-210ENST00000517713 MIGA1Q8NAN2 632 aa31.24■■■□□ 2.59
COL13A1-210ENST00000517713 NACAP1Q9BZK3 213 aa31.24■■■□□ 2.59
COL13A1-210ENST00000517713 KIF3AQ9Y496 699 aa31.24■■■□□ 2.59
COL13A1-210ENST00000517713 PRKAB2O43741 272 aa31.23■■■□□ 2.59
COL13A1-210ENST00000517713 UBE2HP62256 183 aa31.23■■■□□ 2.59
COL13A1-210ENST00000517713 KLF18A0A0U1RQI7 1052 aa31.22■■■□□ 2.59
COL13A1-210ENST00000517713 H3BQV1 296 aa31.22■■■□□ 2.59
COL13A1-210ENST00000517713 IFFO2Q5TF58 517 aa31.22■■■□□ 2.59
COL13A1-210ENST00000517713 SYAP1Q96A49 352 aaPredicted RBP31.22■■■□□ 2.59
COL13A1-210ENST00000517713 HIBADHP31937 336 aaKnown RBP31.22■■■□□ 2.59
COL13A1-210ENST00000517713 GRAPQ13588 217 aa31.22■■■□□ 2.59
COL13A1-210ENST00000517713 PRR5LQ6MZQ0 368 aa31.22■■■□□ 2.59
COL13A1-210ENST00000517713 GRAPLQ8TC17 118 aaPredicted RBP31.22■■■□□ 2.59
COL13A1-210ENST00000517713 SALL1Q9NSC2 1324 aa31.21■■■□□ 2.59
COL13A1-210ENST00000517713 KRT85P78386 507 aa31.21■■■□□ 2.59
COL13A1-210ENST00000517713 CYB5R4Q7L1T6 521 aa31.21■■■□□ 2.59
COL13A1-210ENST00000517713 ADGRA1Q86SQ6 560 aa31.21■■■□□ 2.59
COL13A1-210ENST00000517713 PANK2Q9BZ23 570 aa31.21■■■□□ 2.59
COL13A1-210ENST00000517713 TFCP2L1Q9NZI6 479 aa31.21■■■□□ 2.59
COL13A1-210ENST00000517713 PDS5AQ29RF7 1337 aaKnown RBP31.2■■■□□ 2.59
COL13A1-210ENST00000517713 TDO2P48775 406 aa31.2■■■□□ 2.58
COL13A1-210ENST00000517713 NEDD4P46934 1319 aa31.2■■■□□ 2.58
COL13A1-210ENST00000517713 MAGEB6P1A0A0J9YX57 407 aa31.19■■■□□ 2.58
COL13A1-210ENST00000517713 B4E1Z4 1266 aa31.19■■■□□ 2.58
COL13A1-210ENST00000517713 GOLGA8BA8MQT2 603 aa31.19■■■□□ 2.58
COL13A1-210ENST00000517713 CTDSPL2Q05D32 466 aa31.19■■■□□ 2.58
COL13A1-210ENST00000517713 NKX2-3Q8TAU0 364 aa31.19■■■□□ 2.58
COL13A1-210ENST00000517713 ANGEL1Q9UNK9 670 aaKnown RBP31.19■■■□□ 2.58
COL13A1-210ENST00000517713 FAM173BQ6P4H8 233 aa31.18■■■□□ 2.58
COL13A1-210ENST00000517713 HPS5Q9UPZ3 1129 aa31.18■■■□□ 2.58
COL13A1-210ENST00000517713 CACNA1SQ13698 1873 aa31.18■■■□□ 2.58
COL13A1-210ENST00000517713 SYCE3A1L190 88 aa31.17■■■□□ 2.58
COL13A1-210ENST00000517713 DHX16O60231 1041 aaKnown RBP31.17■■■□□ 2.58
COL13A1-210ENST00000517713 SERPINB2P05120 415 aa31.17■■■□□ 2.58
COL13A1-210ENST00000517713 NAA16Q6N069 864 aaPredicted RBP31.17■■■□□ 2.58
COL13A1-210ENST00000517713 ZSCAN16Q9H4T2 348 aaPredicted RBP31.17■■■□□ 2.58
COL13A1-210ENST00000517713 TIAM2Q8IVF5 1701 aa31.17■■■□□ 2.58
COL13A1-210ENST00000517713 SH2B2O14492 632 aaPredicted RBP31.17■■■□□ 2.58
COL13A1-210ENST00000517713 ST5P78524 1137 aa31.17■■■□□ 2.58
COL13A1-210ENST00000517713 RESTQ13127 1097 aa31.17■■■□□ 2.58
COL13A1-210ENST00000517713 AKNAD1Q5T1N1 836 aa31.17■■■□□ 2.58
COL13A1-210ENST00000517713 TMEM87BQ96K49 555 aa31.17■■■□□ 2.58
COL13A1-210ENST00000517713 CNNM2Q9H8M5 875 aa31.17■■■□□ 2.58
COL13A1-210ENST00000517713 MYH13Q9UKX3 1938 aa31.16■■■□□ 2.58
COL13A1-210ENST00000517713 TXNRD1Q16881 649 aa31.16■■■□□ 2.58
COL13A1-210ENST00000517713 LRSAM1Q6UWE0 723 aa31.16■■■□□ 2.58
COL13A1-210ENST00000517713 INCENPQ9NQS7 918 aa31.16■■■□□ 2.58
COL13A1-210ENST00000517713 CHD4Q14839 1912 aa31.16■■■□□ 2.58
COL13A1-210ENST00000517713 HMGB2P26583 209 aaKnown RBP31.15■■■□□ 2.58
COL13A1-210ENST00000517713 PROM2Q8N271 834 aa31.15■■■□□ 2.58
COL13A1-210ENST00000517713 RPGRQ92834 1020 aaKnown RBP31.15■■■□□ 2.58
COL13A1-210ENST00000517713 ANKIB1Q9P2G1 1089 aa31.15■■■□□ 2.58
COL13A1-210ENST00000517713 IRS2Q9Y4H2 1338 aa31.15■■■□□ 2.58
COL13A1-210ENST00000517713 MFSD6Q6ZSS7 791 aa31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms