RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 ELOA3BQ3SY89 546 aa8.19□□□□□ -1.1
CTNNA1-202ENST00000517533 LCE2CQ5TA81 110 aa8.19□□□□□ -1.1
CTNNA1-202ENST00000517533 GDF6Q6KF10 455 aaPredicted RBP8.19□□□□□ -1.1
CTNNA1-202ENST00000517533 C8orf86Q6ZUL3 223 aa8.19□□□□□ -1.1
CTNNA1-202ENST00000517533 ELOA3Q8NG57 546 aa8.19□□□□□ -1.1
CTNNA1-202ENST00000517533 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.19□□□□□ -1.11e-7■■□□□ 11.9
CTNNA1-202ENST00000517533 NT5C1AQ9BXI3 368 aa8.19□□□□□ -1.1
CTNNA1-202ENST00000517533 RBSNQ9H1K0 784 aa8.19□□□□□ -1.1
CTNNA1-202ENST00000517533 ZFYVE1Q9HBF4 777 aa8.19□□□□□ -1.1
CTNNA1-202ENST00000517533 FRRS1LQ9P0K9 344 aa8.19□□□□□ -1.1
CTNNA1-202ENST00000517533 EFR3BQ9Y2G0 817 aa8.19□□□□□ -1.1
CTNNA1-202ENST00000517533 F13A1P00488 732 aa8.18□□□□□ -1.1
CTNNA1-202ENST00000517533 ALBP02768 609 aa8.18□□□□□ -1.1
CTNNA1-202ENST00000517533 SELPP16109 830 aa8.18□□□□□ -1.1
CTNNA1-202ENST00000517533 CDC25BP30305 580 aa8.18□□□□□ -1.1
CTNNA1-202ENST00000517533 NASPP49321 788 aaPredicted RBP8.18□□□□□ -1.1
CTNNA1-202ENST00000517533 SEPT6Q14141 434 aa8.18□□□□□ -1.1
CTNNA1-202ENST00000517533 ACDQ96AP0 544 aa8.18□□□□□ -1.1
CTNNA1-202ENST00000517533 FAM221AA4D161 298 aa8.17□□□□□ -1.1
CTNNA1-202ENST00000517533 TM4SF5O14894 197 aa8.17□□□□□ -1.1
CTNNA1-202ENST00000517533 RLBP1P12271 317 aa8.17□□□□□ -1.1
CTNNA1-202ENST00000517533 MAP2K3P46734 347 aa8.17□□□□□ -1.1
CTNNA1-202ENST00000517533 RPS26P62854 115 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-202ENST00000517533 SNAP47Q5SQN1 464 aa8.17□□□□□ -1.1
CTNNA1-202ENST00000517533 TXNDC11Q6PKC3 985 aa8.17□□□□□ -1.1
CTNNA1-202ENST00000517533 FAM196AQ6ZSG2 479 aa8.17□□□□□ -1.1
CTNNA1-202ENST00000517533 PDZD3Q86UT5 571 aa8.17□□□□□ -1.1
CTNNA1-202ENST00000517533 TRIM42Q8IWZ5 723 aa8.17□□□□□ -1.1
CTNNA1-202ENST00000517533 MICALL1Q8N3F8 863 aa8.17□□□□□ -1.1
CTNNA1-202ENST00000517533 TTC9Q92623 222 aa8.17□□□□□ -1.1
CTNNA1-202ENST00000517533 GAL3ST3Q96A11 431 aa8.17□□□□□ -1.1
CTNNA1-202ENST00000517533 SUPT16HQ9Y5B9 1047 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-202ENST00000517533 TLR3O15455 904 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-202ENST00000517533 ECEL1O95672 775 aa8.16□□□□□ -1.1
CTNNA1-202ENST00000517533 NME2P22392 152 aa8.16□□□□□ -1.1
CTNNA1-202ENST00000517533 CDC27P30260 824 aa8.16□□□□□ -1.1
CTNNA1-202ENST00000517533 SOX9P48436 509 aa8.16□□□□□ -1.1
CTNNA1-202ENST00000517533 ZNF252P-AS1Q0IIN9 211 aa8.16□□□□□ -1.1
CTNNA1-202ENST00000517533 SLCO4C1Q6ZQN7 724 aa8.16□□□□□ -1.1
CTNNA1-202ENST00000517533 SULF2Q8IWU5 870 aa8.16□□□□□ -1.1
CTNNA1-202ENST00000517533 ARMC5Q96C12 935 aa8.16□□□□□ -1.1
CTNNA1-202ENST00000517533 SEC16BQ96JE7 1060 aa8.16□□□□□ -1.1
CTNNA1-202ENST00000517533 PIF1Q9H611 641 aa8.16□□□□□ -1.1
CTNNA1-202ENST00000517533 ARID4BQ4LE39 1312 aaPredicted RBP8.15□□□□□ -1.1
CTNNA1-202ENST00000517533 EPXP11678 715 aa8.15□□□□□ -1.1
CTNNA1-202ENST00000517533 ETFBP38117 255 aa8.15□□□□□ -1.1
CTNNA1-202ENST00000517533 CDK8P49336 464 aa8.15□□□□□ -1.1
CTNNA1-202ENST00000517533 AFF1P51825 1210 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-202ENST00000517533 NOP9Q86U38 636 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-202ENST00000517533 VPS37DQ86XT2 251 aa8.15□□□□□ -1.1
CTNNA1-202ENST00000517533 CERS3Q8IU89 383 aa8.15□□□□□ -1.1
CTNNA1-202ENST00000517533 NRSN2Q9GZP1 204 aa8.15□□□□□ -1.1
CTNNA1-202ENST00000517533 ZNF408Q9H9D4 720 aa8.15□□□□□ -1.1
CTNNA1-202ENST00000517533 MRVI1Q9Y6F6 885 aa8.15□□□□□ -1.1
CTNNA1-202ENST00000517533 RGS9O75916 674 aaPredicted RBP8.14□□□□□ -1.11
CTNNA1-202ENST00000517533 CTSBP07858 339 aa8.14□□□□□ -1.11
CTNNA1-202ENST00000517533 ARNTP27540 789 aa8.14□□□□□ -1.11
CTNNA1-202ENST00000517533 APOBRQ0VD83 1088 aa8.14□□□□□ -1.11
CTNNA1-202ENST00000517533 NFX1Q12986 1120 aaKnown RBP8.14□□□□□ -1.11
CTNNA1-202ENST00000517533 IKBKEQ14164 716 aa8.14□□□□□ -1.11
CTNNA1-202ENST00000517533 CCDC144BQ3MJ40 725 aa8.14□□□□□ -1.11
CTNNA1-202ENST00000517533 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.14□□□□□ -1.11
CTNNA1-202ENST00000517533 SLITRK4Q8IW52 837 aa8.14□□□□□ -1.11
CTNNA1-202ENST00000517533 NPAS3Q8IXF0 933 aa8.14□□□□□ -1.11
CTNNA1-202ENST00000517533 PMFBP1Q8TBY8 1022 aa8.14□□□□□ -1.11
CTNNA1-202ENST00000517533 JARID2Q92833 1246 aaPredicted RBP8.14□□□□□ -1.11
CTNNA1-202ENST00000517533 TERTO14746 1132 aaKnown RBP8.13□□□□□ -1.11
CTNNA1-202ENST00000517533 PPP2R3AQ06190 1150 aa8.13□□□□□ -1.11
CTNNA1-202ENST00000517533 COL9A3Q14050 684 aaPredicted RBP8.13□□□□□ -1.11
CTNNA1-202ENST00000517533 SEZ6Q53EL9 994 aa8.13□□□□□ -1.11
CTNNA1-202ENST00000517533 CCDC81Q6ZN84 652 aa8.13□□□□□ -1.11
CTNNA1-202ENST00000517533 ILDR2Q71H61 639 aa8.13□□□□□ -1.11
CTNNA1-202ENST00000517533 IL22RA1Q8N6P7 574 aa8.13□□□□□ -1.11
CTNNA1-202ENST00000517533 GOLGA6L1Q8N7Z2 621 aa8.13□□□□□ -1.11
CTNNA1-202ENST00000517533 GATAD2BQ8WXI9 593 aa8.13□□□□□ -1.11
CTNNA1-202ENST00000517533 LRRC3Q9BY71 257 aa8.13□□□□□ -1.11
CTNNA1-202ENST00000517533 JPH1Q9HDC5 661 aaPredicted RBP8.13□□□□□ -1.11
CTNNA1-202ENST00000517533 PPT2Q9UMR5 302 aa8.13□□□□□ -1.11
CTNNA1-202ENST00000517533 SBNO2Q9Y2G9 1366 aa8.12□□□□□ -1.11
CTNNA1-202ENST00000517533 SHISA8B8ZZ34 492 aa8.12□□□□□ -1.11
CTNNA1-202ENST00000517533 H3BRJ5 948 aa8.12□□□□□ -1.11
CTNNA1-202ENST00000517533 LINC01387J3KSC0 135 aa8.12□□□□□ -1.11
CTNNA1-202ENST00000517533 MARCH6O60337 910 aa8.12□□□□□ -1.11
CTNNA1-202ENST00000517533 CILPO75339 1184 aa8.12□□□□□ -1.11
CTNNA1-202ENST00000517533 ADAMTS2O95450 1211 aa8.12□□□□□ -1.11
CTNNA1-202ENST00000517533 SRSF11Q05519 484 aaKnown RBP8.12□□□□□ -1.11
CTNNA1-202ENST00000517533 NKD1Q969G9 470 aa8.12□□□□□ -1.11
CTNNA1-202ENST00000517533 CACNA2D2Q9NY47 1150 aa8.12□□□□□ -1.11
CTNNA1-202ENST00000517533 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.12□□□□□ -1.11
CTNNA1-202ENST00000517533 TLDC2A0PJX2 215 aa8.11□□□□□ -1.11
CTNNA1-202ENST00000517533 LLGL2Q6P1M3 1020 aa8.11□□□□□ -1.11
CTNNA1-202ENST00000517533 SLC7A3Q8WY07 619 aa8.11□□□□□ -1.11
CTNNA1-202ENST00000517533 SHDQ96IW2 340 aa8.11□□□□□ -1.11
CTNNA1-202ENST00000517533 CARD10Q9BWT7 1032 aa8.11□□□□□ -1.11
CTNNA1-202ENST00000517533 ZC3H12CQ9C0D7 883 aaKnown RBP8.11□□□□□ -1.11
CTNNA1-202ENST00000517533 MIR1-1HGQ9H1L0 117 aa8.11□□□□□ -1.11
CTNNA1-202ENST00000517533 CBX8Q9HC52 389 aa8.11□□□□□ -1.11
CTNNA1-202ENST00000517533 CYP8B1Q9UNU6 501 aa8.11□□□□□ -1.11
CTNNA1-202ENST00000517533 NSFL1CQ9UNZ2 370 aaKnown RBP8.11□□□□□ -1.11
CTNNA1-202ENST00000517533 TMA7Q9Y2S6 64 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms