RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 UBAP1LF5GYI3 381 aa4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 F2P00734 622 aa4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 IL2RAP01589 272 aa4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 LDHCP07864 332 aa4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 MCCP23508 829 aa4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 ZNF165P49910 485 aa4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 COPS2P61201 443 aa4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 MTMR1Q13613 665 aa4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 ARID5BQ14865 1188 aa4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 KANK3Q6NY19 840 aa4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 C6orf15Q6UXA7 325 aaPredicted RBP4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 TPTE2Q6XPS3 522 aa4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 FAM43BQ6ZT52 329 aaPredicted RBP4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 HDGFL2Q7Z4V5 671 aaPredicted RBP4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 ZBTB46Q86UZ6 589 aa4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 DGKHQ86XP1 1220 aa4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 SMAP1Q8IYB5 467 aaPredicted RBP4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 AFAP1L2Q8N4X5 818 aa4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 C1orf131Q8NDD1 294 aaKnown RBP4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 GLIS3Q8NEA6 775 aa4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 ST13P5Q8NFI4 369 aaPredicted RBP4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 RIN3Q8TB24 985 aa4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 PLD4Q96BZ4 506 aa4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 PKNOX2Q96KN3 472 aa4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 SLC26A8Q96RN1 970 aa4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 RTFDC1Q9BY42 306 aaPredicted RBP4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 AS3MTQ9HBK9 375 aa4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 ARHGEF10LQ9HCE6 1279 aa4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 TMEM63CQ9P1W3 806 aa4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 KLF15Q9UIH9 416 aa4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 TRAK1Q9UPV9 953 aa4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 HPS5Q9UPZ3 1129 aa4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 AXIN2Q9Y2T1 843 aa4.97□□□□□ -1.61
RNU4-60P-201ENST00000517239 PHLDB1Q86UU1 1377 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 E2F8A0AVK6 867 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 GSG1L2A8MUP6 293 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 SLC26A4O43511 780 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 RFPL3O75679 317 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 RAPGEF3O95398 923 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 EYA4O95677 639 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 COL6A1P12109 1028 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 CASP7P55210 303 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 SH3BP2P78314 561 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 STRN3Q13033 797 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 PICALMQ13492 652 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 FAM83BQ5T0W9 1011 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 ANO1Q5XXA6 986 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 NXNQ6DKJ4 435 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 PDE12Q6L8Q7 609 aaKnown RBP4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 CCDC70Q6NSX1 233 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 DTHD1Q6ZMT9 781 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 GK5Q6ZS86 529 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 FAM178BQ8IXR5 827 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 CPXCR1Q8N123 301 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 MRPL50Q8N5N7 158 aaKnown RBP4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 NBPF15Q8N660 670 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 MAGEB6Q8N7X4 407 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 C1orf127Q8N9H9 656 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 TEX19Q8NA77 164 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 ZNF784Q8NCA9 323 aaPredicted RBP4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 WDR66Q8TBY9 1149 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 LEO1Q8WVC0 666 aaPredicted RBP4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 JPH3Q8WXH2 748 aaPredicted RBP4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 JARID2Q92833 1246 aaPredicted RBP4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 CNKSR1Q969H4 720 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 SPATA9Q9BWV2 254 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 OXCT2Q9BYC2 517 aaPredicted RBP4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 ATG3Q9NT62 314 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 ANKIB1Q9P2G1 1089 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 PUF60Q9UHX1 559 aaKnown RBP4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 PPP2R3BQ9Y5P8 575 aa4.96□□□□□ -1.62
RNU4-60P-201ENST00000517239 A0A1W2PP55 124 aa4.95□□□□□ -1.62
RNU4-60P-201ENST00000517239 DYTNA2CJ06 578 aa4.95□□□□□ -1.62
RNU4-60P-201ENST00000517239 VSTM5A8MXK1 200 aa4.95□□□□□ -1.62
RNU4-60P-201ENST00000517239 BHMG1C9JSJ3 638 aaPredicted RBP4.95□□□□□ -1.62
RNU4-60P-201ENST00000517239 TCEA3O75764 348 aa4.95□□□□□ -1.62
RNU4-60P-201ENST00000517239 F13A1P00488 732 aa4.95□□□□□ -1.62
RNU4-60P-201ENST00000517239 CELA3AP09093 270 aa4.95□□□□□ -1.62
RNU4-60P-201ENST00000517239 ZSCAN20P17040 1043 aaPredicted RBP4.95□□□□□ -1.62
RNU4-60P-201ENST00000517239 TFE3P19532 575 aaPredicted RBP4.95□□□□□ -1.62
RNU4-60P-201ENST00000517239 L1CAMP32004 1257 aa4.95□□□□□ -1.62
RNU4-60P-201ENST00000517239 CCNFP41002 786 aa4.95□□□□□ -1.62
RNU4-60P-201ENST00000517239 PURAQ00577 322 aaKnown RBP4.95□□□□□ -1.62
RNU4-60P-201ENST00000517239 TCIRG1Q13488 830 aa4.95□□□□□ -1.62
RNU4-60P-201ENST00000517239 SLC4A8Q2Y0W8 1093 aa4.95□□□□□ -1.62
RNU4-60P-201ENST00000517239 ERAP2Q6P179 960 aa4.95□□□□□ -1.62
RNU4-60P-201ENST00000517239 CCDC174Q6PII3 467 aa4.95□□□□□ -1.62
RNU4-60P-201ENST00000517239 BNC2Q6ZN30 1099 aaPredicted RBP4.95□□□□□ -1.62
RNU4-60P-201ENST00000517239 RUFY4Q6ZNE9 571 aa4.95□□□□□ -1.62
RNU4-60P-201ENST00000517239 LHFPL2Q6ZUX7 228 aa4.95□□□□□ -1.62
RNU4-60P-201ENST00000517239 MORC1Q86VD1 984 aa4.95□□□□□ -1.62
RNU4-60P-201ENST00000517239 ANKRD42Q8N9B4 389 aa4.95□□□□□ -1.62
RNU4-60P-201ENST00000517239 ZBTB38Q8NAP3 1195 aaPredicted RBP4.95□□□□□ -1.62
RNU4-60P-201ENST00000517239 VPS37AQ8NEZ2 397 aa4.95□□□□□ -1.62
RNU4-60P-201ENST00000517239 ANKRD24Q8TF21 1146 aa4.95□□□□□ -1.62
RNU4-60P-201ENST00000517239 ZNF669Q96BR6 464 aaPredicted RBP4.95□□□□□ -1.62
RNU4-60P-201ENST00000517239 CHMP4CQ96CF2 233 aa4.95□□□□□ -1.62
RNU4-60P-201ENST00000517239 TIFAQ96CG3 184 aa4.95□□□□□ -1.62
RNU4-60P-201ENST00000517239 RUSC1Q9BVN2 902 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms