RNA–Protein interactions for RNA: ENST00000516847.1

RN7SKP88-201, Transcript of RNA, 7SK small nuclear pseudogene 88, humanhuman

BASIC

Gene RN7SKP88, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP88-201ENST00000516847 TRIM37O94972 964 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 BPNT1O95861 308 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 THBS1P07996 1170 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 RHOQP17081 205 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 LMNB1P20700 586 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 BMP6P22004 513 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 SIK1P57059 783 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 CHMP4BP1P59074 171 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 RPL6Q02878 288 aaKnown RBP1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 ZNF252P-AS1Q0IIN9 211 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 AP3B2Q13367 1082 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 MAP3K11Q16584 847 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 LONRF2Q1L5Z9 754 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 SPRED3Q2MJR0 410 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 LRRFIP1Q32MZ4 808 aaKnown RBP1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 ZC3H12BQ5HYM0 836 aaKnown RBP1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 C6orf118Q5T5N4 469 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 COL13A1Q5TAT6 717 aaPredicted RBP1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 LLGL2Q6P1M3 1020 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 BNC2Q6ZN30 1099 aaPredicted RBP1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 C16orf86Q6ZW13 317 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 NOL8Q76FK4 1167 aaKnown RBP1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 KRT25Q7Z3Z0 450 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 LSRQ86X29 649 aaPredicted RBP1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 TRIM22Q8IYM9 498 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 RPUSD2Q8IZ73 545 aaKnown RBP1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 CACTIN-AS1Q8N1I8 211 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 CELF2-AS1Q8N7Q2 184 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 DDX54Q8TDD1 881 aaKnown RBP1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 GAL3ST3Q96A11 431 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 FERD3LQ96RJ6 166 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 GAS2L1Q99501 681 aaPredicted RBP1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 DNAJC7Q99615 494 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 TM9SF2Q99805 663 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 EMILIN2Q9BXX0 1053 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 CHMP4AQ9BY43 222 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 NUCKS1Q9H1E3 243 aaKnown RBP1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 RBSNQ9H1K0 784 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 SOX17Q9H6I2 414 aaPredicted RBP1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 CWC22Q9HCG8 908 aaKnown RBP1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 AVENQ9NQS1 362 aaPredicted RBP1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 FANCLQ9NW38 375 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 CACNA2D2Q9NY47 1150 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 GPN3Q9UHW5 284 aaPredicted RBP1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 DNMT3LQ9UJW3 386 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 PLAAQ9Y263 795 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 SLC12A7Q9Y666 1083 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 TACC3Q9Y6A5 838 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 PRR36Q9H6K5 1346 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 CCDC163A0A0D9SF12 145 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 ESYT3A0FGR9 886 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 DCDC2BA2VCK2 349 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 SLC35F4A4IF30 521 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 METTL12A8MUP2 240 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 BNIP3LO60238 219 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 SIN3BO75182 1162 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 RGS20O76081 388 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 GHRHP01286 108 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 ACPPP15309 386 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 PTPRAP18433 802 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 GUCY2CP25092 1073 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 ARNTP27540 789 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 HNRNPUQ00839 825 aaKnown RBP eCLIP1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 PCDH1Q08174 1060 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 SQSTM1Q13501 440 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 TCEA2Q15560 299 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 MTERF2Q49AM1 385 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 TMEM67Q5HYA8 995 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 ZNF468Q5VIY5 522 aaPredicted RBP1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 INTS3Q68E01 1043 aaKnown RBP1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 CCDC81Q6ZN84 652 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 KRT26Q7Z3Y9 468 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 TRIM46Q7Z4K8 759 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 PDZD3Q86UT5 571 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 SULF2Q8IWU5 870 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 LILRB2Q8N423 598 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 FBXO27Q8NI29 283 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 TTC9Q92623 222 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 TNFRSF25Q93038 417 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 BHMTQ93088 406 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 ZFP42Q96MM3 310 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 NSUN5Q96P11 429 aaKnown RBP1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 HHIPQ96QV1 700 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 SLC30A3Q99726 388 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 ADAM19Q9H013 955 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 MUC3BQ9H195 1237 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 IRF2BPLQ9H1B7 796 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 EPN3Q9H201 632 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 RASSF4Q9H2L5 321 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 BRMS1Q9HCU9 246 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 STRN4Q9NRL3 753 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 DDX56Q9NY93 547 aaKnown RBP1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 FRRS1LQ9P0K9 344 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 SOX13Q9UN79 622 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 PHF24Q9UPV7 400 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 PCDHB5Q9Y5E4 795 aa1.86□□□□□ -2.11
RN7SKP88-201ENST00000516847 A0A1W2PQH9 124 aa1.85□□□□□ -2.11
RN7SKP88-201ENST00000516847 IQCA1LA6NCM1 817 aa1.85□□□□□ -2.11
RN7SKP88-201ENST00000516847 CCDC85CA6NKD9 419 aa1.85□□□□□ -2.11
RN7SKP88-201ENST00000516847 FIGNL2A6NMB9 653 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms