RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	CWC22	Q9HCG8	908 aa	Known RBP	5.38	□□□□□ -1.55
ATP2C1-223	ENST00000515854	HMG20B	Q9P0W2	317 aa		5.38	□□□□□ -1.55
ATP2C1-223	ENST00000515854	MINPP1	Q9UNW1	487 aa		5.38	□□□□□ -1.55
ATP2C1-223	ENST00000515854	ARIH1	Q9Y4X5	557 aa	Predicted RBP	5.38	□□□□□ -1.55
ATP2C1-223	ENST00000515854	CARMIL3	Q8ND23	1372 aa		5.38	□□□□□ -1.55
ATP2C1-223	ENST00000515854	RPAP1	Q9BWH6	1393 aa	Predicted RBP	5.38	□□□□□ -1.55
ATP2C1-223	ENST00000515854	COL4A1	P02462	1669 aa		5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	C4A	P0C0L4	1744 aa		5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	ARAP2	Q8WZ64	1704 aa		5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854		M0R2C6	588 aa		5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	TK2	O00142	265 aa		5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	SNAP23	O00161	211 aa		5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	HSP90AA1	P07900	732 aa	Known RBP	5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	PSMA5	P28066	241 aa		5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	ADD2	P35612	726 aa		5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	KCNJ4	P48050	445 aa		5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	RPS8	P62241	208 aa	Known RBP	5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	KRT32	Q14532	448 aa		5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	RAB3GAP1	Q15042	981 aa		5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	UBE3C	Q15386	1083 aa		5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	ADCK5	Q3MIX3	580 aa		5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	SLFNL1	Q499Z3	407 aa		5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	VPS53	Q5VIR6	699 aa		5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	PRR5L	Q6MZQ0	368 aa		5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	ZSCAN25	Q6NSZ9	544 aa		5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	PI16	Q6UXB8	463 aa		5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	CCDC129	Q6ZRS4	1044 aa		5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	RUFY3	Q7L099	469 aa		5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	APPBP2	Q92624	585 aa		5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	CELF1	Q92879	486 aa	Known RBP	5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	OSBP2	Q969R2	916 aa		5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	INTS4	Q96HW7	963 aa	Known RBP	5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	JAKMIP1	Q96N16	626 aa	Known RBP	5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	PIH1D3	Q9NQM4	214 aa	Known RBP	5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	RGS17	Q9UGC6	210 aa	Predicted RBP	5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	CYP46A1	Q9Y6A2	500 aa		5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	ZNF804B	A4D1E1	1349 aa		5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	MAST3	O60307	1309 aa		5.37	□□□□□ -1.55
ATP2C1-223	ENST00000515854	TCRBV5S4A2T	A0A5A2	114 aa		5.36	□□□□□ -1.55
ATP2C1-223	ENST00000515854	FRAT2	O75474	233 aa	Predicted RBP	5.36	□□□□□ -1.55
ATP2C1-223	ENST00000515854	APBA3	O96018	575 aa		5.36	□□□□□ -1.55
ATP2C1-223	ENST00000515854	SERPINB2	P05120	415 aa		5.36	□□□□□ -1.55
ATP2C1-223	ENST00000515854	CYP21A2	P08686	494 aa		5.36	□□□□□ -1.55
ATP2C1-223	ENST00000515854	HSPD1	P10809	573 aa	Known RBP	5.36	□□□□□ -1.55
ATP2C1-223	ENST00000515854	CAST	P20810	708 aa	Known RBP	5.36	□□□□□ -1.55
ATP2C1-223	ENST00000515854	BCAM	P50895	628 aa		5.36	□□□□□ -1.55
ATP2C1-223	ENST00000515854	AK2	P54819	239 aa		5.36	□□□□□ -1.55
ATP2C1-223	ENST00000515854	NUCB2	P80303	420 aa		5.36	□□□□□ -1.55
ATP2C1-223	ENST00000515854	RASGRF1	Q13972	1273 aa		5.36	□□□□□ -1.55
ATP2C1-223	ENST00000515854	MFSD10	Q14728	455 aa		5.36	□□□□□ -1.55
ATP2C1-223	ENST00000515854	E2F4	Q16254	413 aa		5.36	□□□□□ -1.55
ATP2C1-223	ENST00000515854	CLEC17A	Q6ZS10	378 aa		5.36	□□□□□ -1.55
ATP2C1-223	ENST00000515854	CCDC24	Q8N4L8	307 aa		5.36	□□□□□ -1.55
ATP2C1-223	ENST00000515854	CNBD1	Q8NA66	436 aa		5.36	□□□□□ -1.55
ATP2C1-223	ENST00000515854	SPATA5	Q8NB90	893 aa		5.36	□□□□□ -1.55
ATP2C1-223	ENST00000515854	ZSCAN31	Q96LW9	406 aa	Predicted RBP	5.36	□□□□□ -1.55
ATP2C1-223	ENST00000515854	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	5.36	□□□□□ -1.55	9e-8	■■■□□ 17.1
ATP2C1-223	ENST00000515854	ANKRD2	Q9GZV1	360 aa		5.36	□□□□□ -1.55
ATP2C1-223	ENST00000515854	PUS7L	Q9H0K6	701 aa	Known RBP	5.36	□□□□□ -1.55
ATP2C1-223	ENST00000515854	PDRG1	Q9NUG6	133 aa		5.36	□□□□□ -1.55
ATP2C1-223	ENST00000515854	LIMCH1	Q9UPQ0	1083 aa		5.36	□□□□□ -1.55
ATP2C1-223	ENST00000515854	TAF6L	Q9Y6J9	622 aa		5.36	□□□□□ -1.55
ATP2C1-223	ENST00000515854	UBR3	Q6ZT12	1888 aa		5.36	□□□□□ -1.55
ATP2C1-223	ENST00000515854	PDS5A	Q29RF7	1337 aa	Known RBP	5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	IRS2	Q9Y4H2	1338 aa		5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	KLRG2	A4D1S0	409 aa	Predicted RBP	5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	WTIP	A6NIX2	430 aa	Predicted RBP	5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	POLRMT	O00411	1230 aa	Known RBP	5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	ARHGAP33	O14559	1287 aa		5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	SEMA3E	O15041	775 aa		5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	FOXP2	O15409	715 aa		5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	CPA1	P15085	419 aa		5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	PDE6A	P16499	860 aa		5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	RPS6KB1	P23443	525 aa		5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	MCM4	P33991	863 aa		5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	DDR1	Q08345	913 aa		5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	GRAP	Q13588	217 aa		5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	ANKRD1	Q15327	319 aa		5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	ZNF827	Q17R98	1081 aa		5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	WASHC4	Q2M389	1173 aa		5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	CRY2	Q49AN0	593 aa		5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	CAVIN4	Q5BKX8	364 aa		5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	SLC9C2	Q5TAH2	1124 aa		5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	BLOC1S2	Q6QNY1	142 aa		5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	POTEA	Q6S8J7	498 aa		5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	FBXO33	Q7Z6M2	555 aa		5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	ZGPAT	Q8N5A5	531 aa	Known RBP	5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	FLAD1	Q8NFF5	587 aa		5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	GRAPL	Q8TC17	118 aa	Predicted RBP	5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	TNPO1	Q92973	898 aa	Known RBP	5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	FAM84B	Q96KN1	310 aa	Predicted RBP	5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	NEK1	Q96PY6	1258 aa		5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	CTNNA3	Q9UI47	895 aa		5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	WWC3	Q9ULE0	1092 aa		5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	AKAP11	Q9UKA4	1901 aa		5.35	□□□□□ -1.55
ATP2C1-223	ENST00000515854	TNRC6C	Q9HCJ0	1690 aa	Known RBP	5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854	ZNF532	Q9HCE3	1301 aa		5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854	GPAA1	O43292	621 aa		5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854	IGSF3	O75054	1194 aa		5.34	□□□□□ -1.55
ATP2C1-223	ENST00000515854	IDH1	O75874	414 aa	Known RBP	5.34	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms