RNA–Protein interactions for RNA: ENST00000515810.1

ATR-209, Transcript of ATR serine/threonine kinase, humanhuman

TSL 3

Gene ATR, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-209ENST00000515810 SHISA8B8ZZ34 492 aa9.82□□□□□ -0.84
ATR-209ENST00000515810 GREM1O60565 184 aa9.82□□□□□ -0.84
ATR-209ENST00000515810 CRKP46108 304 aa9.82□□□□□ -0.84
ATR-209ENST00000515810 IKBKEQ14164 716 aa9.82□□□□□ -0.84
ATR-209ENST00000515810 BNC2Q6ZN30 1099 aaPredicted RBP9.82□□□□□ -0.84
ATR-209ENST00000515810 FBXO27Q8NI29 283 aa9.82□□□□□ -0.84
ATR-209ENST00000515810 UBXN4Q92575 508 aa9.82□□□□□ -0.84
ATR-209ENST00000515810 DNAJC2Q99543 621 aaKnown RBP9.82□□□□□ -0.84
ATR-209ENST00000515810 KCNQ5Q9NR82 932 aa9.82□□□□□ -0.84
ATR-209ENST00000515810 LINC01387J3KSC0 135 aa9.81□□□□□ -0.84
ATR-209ENST00000515810 FGRP09769 529 aa9.81□□□□□ -0.84
ATR-209ENST00000515810 RLBP1P12271 317 aa9.81□□□□□ -0.84
ATR-209ENST00000515810 GTF2F1P35269 517 aaKnown RBP eCLIP9.81□□□□□ -0.84
ATR-209ENST00000515810 LMNB2Q03252 620 aa9.81□□□□□ -0.84
ATR-209ENST00000515810 PTPN11Q06124 597 aaPredicted RBP9.81□□□□□ -0.84
ATR-209ENST00000515810 SEPT6Q14141 434 aa9.81□□□□□ -0.84
ATR-209ENST00000515810 SULF2Q8IWU5 870 aa9.81□□□□□ -0.84
ATR-209ENST00000515810 GALNT6Q8NCL4 622 aa9.81□□□□□ -0.84
ATR-209ENST00000515810 EDARADDQ8WWZ3 215 aa9.81□□□□□ -0.84
ATR-209ENST00000515810 GDF2Q9UK05 429 aaPredicted RBP9.81□□□□□ -0.84
ATR-209ENST00000515810 M0R082 166 aa9.8□□□□□ -0.84
ATR-209ENST00000515810 ECEL1O95672 775 aa9.8□□□□□ -0.84
ATR-209ENST00000515810 F13A1P00488 732 aa9.8□□□□□ -0.84
ATR-209ENST00000515810 NME2P22392 152 aa9.8□□□□□ -0.84
ATR-209ENST00000515810 LORP23490 312 aaPredicted RBP9.8□□□□□ -0.84
ATR-209ENST00000515810 SNAP47Q5SQN1 464 aa9.8□□□□□ -0.84
ATR-209ENST00000515810 ZNF417Q8TAU3 575 aa9.8□□□□□ -0.84
ATR-209ENST00000515810 RASGRP4Q8TDF6 673 aa9.8□□□□□ -0.84
ATR-209ENST00000515810 WHAMMQ8TF30 809 aa9.8□□□□□ -0.84
ATR-209ENST00000515810 SLC7A3Q8WY07 619 aa9.8□□□□□ -0.84
ATR-209ENST00000515810 ZNF587Q96SQ5 575 aaPredicted RBP9.8□□□□□ -0.84
ATR-209ENST00000515810 GINM1Q9NU53 330 aa9.8□□□□□ -0.84
ATR-209ENST00000515810 ATP2B1P20020 1258 aa9.79□□□□□ -0.84
ATR-209ENST00000515810 PPP2R3AQ06190 1150 aa9.79□□□□□ -0.84
ATR-209ENST00000515810 LYPD4Q6UWN0 246 aa9.79□□□□□ -0.84
ATR-209ENST00000515810 CHSY3Q70JA7 882 aa9.79□□□□□ -0.84
ATR-209ENST00000515810 JARID2Q92833 1246 aaPredicted RBP9.79□□□□□ -0.84
ATR-209ENST00000515810 CARD10Q9BWT7 1032 aa9.79□□□□□ -0.84
ATR-209ENST00000515810 ZC3H12CQ9C0D7 883 aaKnown RBP9.79□□□□□ -0.84
ATR-209ENST00000515810 EFR3BQ9Y2G0 817 aa9.79□□□□□ -0.84
ATR-209ENST00000515810 H3BRJ5 948 aa9.78□□□□□ -0.84
ATR-209ENST00000515810 TLR3O15455 904 aaKnown RBP9.78□□□□□ -0.84
ATR-209ENST00000515810 ARNTP27540 789 aa9.78□□□□□ -0.84
ATR-209ENST00000515810 NASPP49321 788 aaPredicted RBP9.78□□□□□ -0.84
ATR-209ENST00000515810 RPS26P62854 115 aaKnown RBP9.78□□□□□ -0.84
ATR-209ENST00000515810 PDZD3Q86UT5 571 aa9.78□□□□□ -0.84
ATR-209ENST00000515810 TRIM42Q8IWZ5 723 aa9.78□□□□□ -0.84
ATR-209ENST00000515810 BTBD6Q96KE9 485 aa9.78□□□□□ -0.84
ATR-209ENST00000515810 NT5C1AQ9BXI3 368 aa9.78□□□□□ -0.84
ATR-209ENST00000515810 CBX8Q9HC52 389 aa9.78□□□□□ -0.84
ATR-209ENST00000515810 SUPT16HQ9Y5B9 1047 aaKnown RBP9.78□□□□□ -0.84
ATR-209ENST00000515810 TM4SF5O14894 197 aa9.77□□□□□ -0.85
ATR-209ENST00000515810 GSTM4Q03013 218 aa9.77□□□□□ -0.85
ATR-209ENST00000515810 COL9A3Q14050 684 aaPredicted RBP9.77□□□□□ -0.85
ATR-209ENST00000515810 KANK3Q6NY19 840 aa9.77□□□□□ -0.85
ATR-209ENST00000515810 VPS37DQ86XT2 251 aa9.77□□□□□ -0.85
ATR-209ENST00000515810 GAL3ST3Q96A11 431 aa9.77□□□□□ -0.85
ATR-209ENST00000515810 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.77□□□□□ -0.852e-7■■■■□ 26.7
ATR-209ENST00000515810 PPME1Q9Y570 386 aa9.77□□□□□ -0.85
ATR-209ENST00000515810 FAM221AA4D161 298 aa9.76□□□□□ -0.85
ATR-209ENST00000515810 OIP5O43482 229 aa9.76□□□□□ -0.85
ATR-209ENST00000515810 LILRB5O75023 590 aa9.76□□□□□ -0.85
ATR-209ENST00000515810 CTSBP07858 339 aa9.76□□□□□ -0.85
ATR-209ENST00000515810 CELA2BP08218 269 aaPredicted RBP9.76□□□□□ -0.85
ATR-209ENST00000515810 CDK8P49336 464 aa9.76□□□□□ -0.85
ATR-209ENST00000515810 CABP4P57796 275 aa9.76□□□□□ -0.85
ATR-209ENST00000515810 ZNF252P-AS1Q0IIN9 211 aa9.76□□□□□ -0.85
ATR-209ENST00000515810 ZNF385CQ66K41 422 aaPredicted RBP9.76□□□□□ -0.85
ATR-209ENST00000515810 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.76□□□□□ -0.85
ATR-209ENST00000515810 FAM196AQ6ZSG2 479 aa9.76□□□□□ -0.85
ATR-209ENST00000515810 SELPP16109 830 aa9.75□□□□□ -0.85
ATR-209ENST00000515810 APOBRQ0VD83 1088 aa9.75□□□□□ -0.85
ATR-209ENST00000515810 LLGL2Q6P1M3 1020 aa9.75□□□□□ -0.85
ATR-209ENST00000515810 NRSN2Q9GZP1 204 aa9.75□□□□□ -0.85
ATR-209ENST00000515810 FSCN2O14926 492 aa9.74□□□□□ -0.85
ATR-209ENST00000515810 BCRP11274 1271 aa9.74□□□□□ -0.85
ATR-209ENST00000515810 SEZ6Q53EL9 994 aa9.74□□□□□ -0.85
ATR-209ENST00000515810 MAP1SQ66K74 1059 aaPredicted RBP9.74□□□□□ -0.85
ATR-209ENST00000515810 MSL1Q68DK7 614 aa9.74□□□□□ -0.85
ATR-209ENST00000515810 GALNT11Q8NCW6 608 aa9.74□□□□□ -0.85
ATR-209ENST00000515810 KLHDC7BQ96G42 594 aa9.74□□□□□ -0.85
ATR-209ENST00000515810 MIR1-1HGQ9H1L0 117 aa9.74□□□□□ -0.85
ATR-209ENST00000515810 CYP8B1Q9UNU6 501 aa9.74□□□□□ -0.85
ATR-209ENST00000515810 MRVI1Q9Y6F6 885 aa9.74□□□□□ -0.85
ATR-209ENST00000515810 FAM177BA6PVY3 158 aa9.73□□□□□ -0.85
ATR-209ENST00000515810 DDX3YO15523 660 aaKnown RBP9.73□□□□□ -0.85
ATR-209ENST00000515810 GSTP1P09211 210 aaKnown RBP9.73□□□□□ -0.85
ATR-209ENST00000515810 HOXB4P17483 251 aaPredicted RBP9.73□□□□□ -0.85
ATR-209ENST00000515810 ILDR2Q71H61 639 aa9.73□□□□□ -0.85
ATR-209ENST00000515810 DPH6Q7L8W6 267 aa9.73□□□□□ -0.85
ATR-209ENST00000515810 GATAD2BQ8WXI9 593 aa9.73□□□□□ -0.85
ATR-209ENST00000515810 NKD1Q969G9 470 aa9.73□□□□□ -0.85
ATR-209ENST00000515810 SEC16BQ96JE7 1060 aa9.73□□□□□ -0.85
ATR-209ENST00000515810 LNPKQ9C0E8 428 aa9.73□□□□□ -0.85
ATR-209ENST00000515810 SHROOM4Q9ULL8 1493 aa9.72□□□□□ -0.85
ATR-209ENST00000515810 NID1P14543 1247 aa9.72□□□□□ -0.85
ATR-209ENST00000515810 SOX9P48436 509 aa9.72□□□□□ -0.85
ATR-209ENST00000515810 C19orf57Q0VDD7 668 aa9.72□□□□□ -0.85
ATR-209ENST00000515810 CCDC81Q6ZN84 652 aa9.72□□□□□ -0.85
ATR-209ENST00000515810 WFDC8Q8IUA0 241 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms