RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 SALL1Q9NSC2 1324 aa23.89■■□□□ 1.41
TRIO-223ENST00000515710 LRRC37AA6NMS7 1700 aa23.89■■□□□ 1.41
TRIO-223ENST00000515710 CHAF1AQ13111 956 aaPredicted RBP23.88■■□□□ 1.41
TRIO-223ENST00000515710 SLC51AQ86UW1 340 aa23.88■■□□□ 1.41
TRIO-223ENST00000515710 TBC1D16Q8TBP0 767 aa23.88■■□□□ 1.41
TRIO-223ENST00000515710 ARMT1Q9H993 441 aa23.88■■□□□ 1.41
TRIO-223ENST00000515710 NAA16Q6N069 864 aaPredicted RBP23.88■■□□□ 1.41
TRIO-223ENST00000515710 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.88■■□□□ 1.41
TRIO-223ENST00000515710 A0A0G2JLW4 131 aa23.87■■□□□ 1.41
TRIO-223ENST00000515710 TOB2Q14106 344 aaPredicted RBP23.87■■□□□ 1.41
TRIO-223ENST00000515710 TMX4Q9H1E5 349 aaPredicted RBP23.87■■□□□ 1.41
TRIO-223ENST00000515710 MAGEB6P1A0A0J9YX57 407 aa23.86■■□□□ 1.41
TRIO-223ENST00000515710 H0YIN7 160 aa23.86■■□□□ 1.41
TRIO-223ENST00000515710 COL9A3Q14050 684 aaPredicted RBP23.86■■□□□ 1.41
TRIO-223ENST00000515710 STYK1Q6J9G0 422 aa23.86■■□□□ 1.41
TRIO-223ENST00000515710 IFNL3Q8IZI9 196 aa23.86■■□□□ 1.41
TRIO-223ENST00000515710 NACAP1Q9BZK3 213 aa23.86■■□□□ 1.41
TRIO-223ENST00000515710 POLLQ9UGP5 575 aa23.86■■□□□ 1.41
TRIO-223ENST00000515710 EXOSC10Q01780 885 aaKnown RBP23.86■■□□□ 1.41
TRIO-223ENST00000515710 C2CD5Q86YS7 1000 aa23.86■■□□□ 1.41
TRIO-223ENST00000515710 LCORLQ8N3X6 602 aa23.86■■□□□ 1.41
TRIO-223ENST00000515710 NSUN4Q96CB9 384 aaKnown RBP23.86■■□□□ 1.41
TRIO-223ENST00000515710 LARP6Q9BRS8 491 aaKnown RBP23.86■■□□□ 1.41
TRIO-223ENST00000515710 CD209Q9NNX6 404 aa23.86■■□□□ 1.41
TRIO-223ENST00000515710 MYH13Q9UKX3 1938 aa23.85■■□□□ 1.41
TRIO-223ENST00000515710 C6orf229H3BNL8 230 aa23.85■■□□□ 1.41
TRIO-223ENST00000515710 IL1R1P14778 569 aa23.85■■□□□ 1.41
TRIO-223ENST00000515710 Q6ZUG5 572 aa23.85■■□□□ 1.41
TRIO-223ENST00000515710 TCEANC2Q96MN5 208 aa23.85■■□□□ 1.41
TRIO-223ENST00000515710 TPCN1Q9ULQ1 816 aa23.85■■□□□ 1.41
TRIO-223ENST00000515710 SLC4A4Q9Y6R1 1079 aa23.85■■□□□ 1.41
TRIO-223ENST00000515710 GSG1L2A8MUP6 293 aa23.84■■□□□ 1.41
TRIO-223ENST00000515710 HAND2P61296 217 aa23.84■■□□□ 1.41
TRIO-223ENST00000515710 MIGA1Q8NAN2 632 aa23.84■■□□□ 1.41
TRIO-223ENST00000515710 SLC16A10Q8TF71 515 aa23.84■■□□□ 1.41
TRIO-223ENST00000515710 NAPBQ9H115 298 aa23.84■■□□□ 1.41
TRIO-223ENST00000515710 CACNA1SQ13698 1873 aa23.84■■□□□ 1.41
TRIO-223ENST00000515710 LARGE1O95461 756 aa23.84■■□□□ 1.41
TRIO-223ENST00000515710 MECOMQ03112 1051 aa23.84■■□□□ 1.41
TRIO-223ENST00000515710 ME3Q16798 604 aa23.84■■□□□ 1.41
TRIO-223ENST00000515710 MPNDQ8N594 471 aa23.84■■□□□ 1.41
TRIO-223ENST00000515710 NCOA7Q8NI08 942 aa23.84■■□□□ 1.41
TRIO-223ENST00000515710 TNPO1Q92973 898 aaKnown RBP23.84■■□□□ 1.41
TRIO-223ENST00000515710 ZNF622Q969S3 477 aaKnown RBP eCLIP23.84■■□□□ 1.41
TRIO-223ENST00000515710 GPR101Q96P66 508 aaPredicted RBP23.84■■□□□ 1.41
TRIO-223ENST00000515710 ADGRA1Q86SQ6 560 aa23.83■■□□□ 1.41
TRIO-223ENST00000515710 FBXL16Q8N461 479 aa23.83■■□□□ 1.41
TRIO-223ENST00000515710 RIOK1Q9BRS2 568 aaKnown RBP23.83■■□□□ 1.41
TRIO-223ENST00000515710 AGXT2Q9BYV1 514 aa23.83■■□□□ 1.41
TRIO-223ENST00000515710 ZNF384Q8TF68 577 aa23.82■■□□□ 1.4
TRIO-223ENST00000515710 EPB41L4AQ9HCS5 686 aaPredicted RBP23.82■■□□□ 1.4
TRIO-223ENST00000515710 LTBP1Q14766 1721 aa23.82■■□□□ 1.4
TRIO-223ENST00000515710 PRDX5P30044 214 aa23.82■■□□□ 1.4
TRIO-223ENST00000515710 FGD1P98174 961 aa23.82■■□□□ 1.4
TRIO-223ENST00000515710 TRDNQ13061 729 aa23.82■■□□□ 1.4
TRIO-223ENST00000515710 COL11A2P13942 1736 aaPredicted RBP23.82■■□□□ 1.4
TRIO-223ENST00000515710 WDR19Q8NEZ3 1342 aa23.81■■□□□ 1.4
TRIO-223ENST00000515710 LDHBP07195 334 aaKnown RBP23.81■■□□□ 1.4
TRIO-223ENST00000515710 RALYLQ86SE5 291 aaKnown RBP23.81■■□□□ 1.4
TRIO-223ENST00000515710 CCDC83Q8IWF9 413 aa23.81■■□□□ 1.4
TRIO-223ENST00000515710 PRKAB2O43741 272 aa23.8■■□□□ 1.4
TRIO-223ENST00000515710 DPP8Q6V1X1 898 aaPredicted RBP23.8■■□□□ 1.4
TRIO-223ENST00000515710 CNKSR1Q969H4 720 aa23.8■■□□□ 1.4
TRIO-223ENST00000515710 GBP4Q96PP9 640 aa23.8■■□□□ 1.4
TRIO-223ENST00000515710 SMC3Q9UQE7 1217 aa23.8■■□□□ 1.4
TRIO-223ENST00000515710 LAMA4Q16363 1823 aa23.8■■□□□ 1.4
TRIO-223ENST00000515710 MCM5P33992 734 aa23.8■■□□□ 1.4
TRIO-223ENST00000515710 TDO2P48775 406 aa23.8■■□□□ 1.4
TRIO-223ENST00000515710 DZIP1Q86YF9 867 aaKnown RBP23.8■■□□□ 1.4
TRIO-223ENST00000515710 MB21D2Q8IYB1 491 aaPredicted RBP23.8■■□□□ 1.4
TRIO-223ENST00000515710 COA1Q9GZY4 146 aa23.8■■□□□ 1.4
TRIO-223ENST00000515710 DUOX1Q9NRD9 1551 aa23.8■■□□□ 1.4
TRIO-223ENST00000515710 MCM4P33991 863 aa23.79■■□□□ 1.4
TRIO-223ENST00000515710 GSTO1P78417 241 aa23.79■■□□□ 1.4
TRIO-223ENST00000515710 GIMAP6Q6P9H5 292 aa23.79■■□□□ 1.4
TRIO-223ENST00000515710 CLEC17AQ6ZS10 378 aa23.79■■□□□ 1.4
TRIO-223ENST00000515710 MAST2Q6P0Q8 1798 aa23.79■■□□□ 1.4
TRIO-223ENST00000515710 BRF1Q92994 677 aa23.78■■□□□ 1.4
TRIO-223ENST00000515710 ZC3H12CQ9C0D7 883 aaKnown RBP23.78■■□□□ 1.4
TRIO-223ENST00000515710 NBPF3Q9H094 633 aa23.78■■□□□ 1.4
TRIO-223ENST00000515710 DYNLL1P63167 89 aaKnown RBP23.78■■□□□ 1.4
TRIO-223ENST00000515710 TBC1D22AQ8WUA7 517 aa23.78■■□□□ 1.4
TRIO-223ENST00000515710 EYA3Q99504 573 aa23.78■■□□□ 1.4
TRIO-223ENST00000515710 JAG2Q9Y219 1238 aa23.78■■□□□ 1.4
TRIO-223ENST00000515710 LDHCP07864 332 aa23.77■■□□□ 1.4
TRIO-223ENST00000515710 TBC1D10CQ8IV04 446 aa23.77■■□□□ 1.4
TRIO-223ENST00000515710 NECAB1Q8N987 351 aa23.77■■□□□ 1.4
TRIO-223ENST00000515710 LRRC2Q9BYS8 371 aa23.77■■□□□ 1.4
TRIO-223ENST00000515710 FAM205AQ6ZU69 1335 aa23.77■■□□□ 1.4
TRIO-223ENST00000515710 ST3GAL1Q11201 340 aa23.76■■□□□ 1.39
TRIO-223ENST00000515710 CNNM2Q9H8M5 875 aa23.76■■□□□ 1.39
TRIO-223ENST00000515710 PRC1O43663 620 aa23.76■■□□□ 1.39
TRIO-223ENST00000515710 CCDC88AQ3V6T2 1871 aa23.76■■□□□ 1.39
TRIO-223ENST00000515710 CHMP4CQ96CF2 233 aa23.76■■□□□ 1.39
TRIO-223ENST00000515710 CRNKL1Q9BZJ0 848 aaKnown RBP23.76■■□□□ 1.39
TRIO-223ENST00000515710 PDGFDQ9GZP0 370 aaPredicted RBP23.76■■□□□ 1.39
TRIO-223ENST00000515710 BRD1O95696 1058 aa23.75■■□□□ 1.39
TRIO-223ENST00000515710 PKP1Q13835 747 aa23.75■■□□□ 1.39
TRIO-223ENST00000515710 ZNF274Q96GC6 653 aaPredicted RBP23.75■■□□□ 1.39
TRIO-223ENST00000515710 ANAPC4Q9UJX5 808 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms