RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 MTMR14Q8NCE2 650 aa17.51■□□□□ 0.39
SMAD1-216ENST00000515527 PNISRQ8TF01 805 aaKnown RBP17.51■□□□□ 0.39
SMAD1-216ENST00000515527 PPM1EQ8WY54 764 aa17.51■□□□□ 0.39
SMAD1-216ENST00000515527 COA1Q9GZY4 146 aa17.51■□□□□ 0.39
SMAD1-216ENST00000515527 THEGQ9P2T0 379 aa17.51■□□□□ 0.39
SMAD1-216ENST00000515527 PDHXO00330 501 aa17.5■□□□□ 0.39
SMAD1-216ENST00000515527 IRF6O14896 467 aa17.5■□□□□ 0.39
SMAD1-216ENST00000515527 EIF2S2P20042 333 aaKnown RBP17.5■□□□□ 0.39
SMAD1-216ENST00000515527 PROSER3Q2NL68 480 aa17.5■□□□□ 0.39
SMAD1-216ENST00000515527 COPS6Q7L5N1 327 aa17.5■□□□□ 0.39
SMAD1-216ENST00000515527 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.5■□□□□ 0.39
SMAD1-216ENST00000515527 IRS4O14654 1257 aaPredicted RBP17.49■□□□□ 0.39
SMAD1-216ENST00000515527 GTF2IP78347 998 aa17.49■□□□□ 0.39
SMAD1-216ENST00000515527 MRPS5P82675 430 aaKnown RBP17.49■□□□□ 0.39
SMAD1-216ENST00000515527 PDIA6Q15084 440 aa17.49■□□□□ 0.39
SMAD1-216ENST00000515527 ERO1BQ86YB8 467 aa17.49■□□□□ 0.39
SMAD1-216ENST00000515527 PFASO15067 1338 aa17.48■□□□□ 0.39
SMAD1-216ENST00000515527 HTATSF1O43719 755 aaKnown RBP17.48■□□□□ 0.39
SMAD1-216ENST00000515527 IRF5Q13568 498 aa17.48■□□□□ 0.39
SMAD1-216ENST00000515527 CFAP100Q494V2 611 aa17.48■□□□□ 0.39
SMAD1-216ENST00000515527 ANKRD23Q86SG2 305 aa17.48■□□□□ 0.39
SMAD1-216ENST00000515527 XAGE3Q8WTP9 111 aa17.48■□□□□ 0.39
SMAD1-216ENST00000515527 TCF20Q9UGU0 1960 aaKnown RBP17.48■□□□□ 0.39
SMAD1-216ENST00000515527 SPDYE2BA6NHP3 402 aa17.47■□□□□ 0.39
SMAD1-216ENST00000515527 SPDYE6P0CI01 402 aa17.47■□□□□ 0.39
SMAD1-216ENST00000515527 SMAD3P84022 425 aaKnown RBP17.47■□□□□ 0.39
SMAD1-216ENST00000515527 TNFAIP1Q13829 316 aa17.47■□□□□ 0.39
SMAD1-216ENST00000515527 TMEM31Q5JXX7 168 aa17.47■□□□□ 0.39
SMAD1-216ENST00000515527 PRMT6Q96LA8 375 aaPredicted RBP17.47■□□□□ 0.39
SMAD1-216ENST00000515527 RSPH6AQ9H0K4 717 aa17.47■□□□□ 0.39
SMAD1-216ENST00000515527 DNAH12Q6ZR08 3092 aa17.46■□□□□ 0.39
SMAD1-216ENST00000515527 COL3A1P02461 1466 aaPredicted RBP17.46■□□□□ 0.39
SMAD1-216ENST00000515527 F8W031 263 aaPredicted RBP17.46■□□□□ 0.39
SMAD1-216ENST00000515527 TNPO2O14787 897 aaKnown RBP17.46■□□□□ 0.39
SMAD1-216ENST00000515527 RBM5P52756 815 aaKnown RBP eCLIP17.46■□□□□ 0.39
SMAD1-216ENST00000515527 SHHQ15465 462 aa17.46■□□□□ 0.39
SMAD1-216ENST00000515527 LRRC26Q2I0M4 334 aa17.46■□□□□ 0.39
SMAD1-216ENST00000515527 ANKRD18AQ8IVF6 992 aa17.46■□□□□ 0.39
SMAD1-216ENST00000515527 NECAB3Q96P71 396 aaPredicted RBP17.46■□□□□ 0.39
SMAD1-216ENST00000515527 SNCAIPQ9Y6H5 919 aa17.46■□□□□ 0.39
SMAD1-216ENST00000515527 AOX1Q06278 1338 aa17.46■□□□□ 0.38
SMAD1-216ENST00000515527 BCRP11274 1271 aa17.45■□□□□ 0.38
SMAD1-216ENST00000515527 PPIL2Q13356 520 aa17.45■□□□□ 0.38
SMAD1-216ENST00000515527 CDAN1Q8IWY9 1227 aa17.45■□□□□ 0.38
SMAD1-216ENST00000515527 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.45■□□□□ 0.38
SMAD1-216ENST00000515527 ATP5J2-PTCD1G3V325 749 aa17.44■□□□□ 0.38
SMAD1-216ENST00000515527 CCDC85AQ96PX6 553 aaPredicted RBP17.44■□□□□ 0.38
SMAD1-216ENST00000515527 PARK7Q99497 189 aaKnown RBP17.44■□□□□ 0.38
SMAD1-216ENST00000515527 HMX1Q9NP08 348 aaPredicted RBP17.44■□□□□ 0.38
SMAD1-216ENST00000515527 DOCK3Q8IZD9 2030 aa17.43■□□□□ 0.38
SMAD1-216ENST00000515527 GRIN2CQ14957 1233 aa17.43■□□□□ 0.38
SMAD1-216ENST00000515527 CCDC152Q4G0S7 254 aa17.43■□□□□ 0.38
SMAD1-216ENST00000515527 AMER1Q5JTC6 1135 aaPredicted RBP17.43■□□□□ 0.38
SMAD1-216ENST00000515527 TXNRD3Q86VQ6 643 aa17.43■□□□□ 0.38
SMAD1-216ENST00000515527 ZBTB38Q8NAP3 1195 aaPredicted RBP17.43■□□□□ 0.38
SMAD1-216ENST00000515527 EPHX3Q9H6B9 360 aa17.43■□□□□ 0.38
SMAD1-216ENST00000515527 OGDHLQ9ULD0 1010 aa17.43■□□□□ 0.38
SMAD1-216ENST00000515527 CCT4P50991 539 aaKnown RBP17.42■□□□□ 0.38
SMAD1-216ENST00000515527 C9orf50Q5SZB4 431 aa17.42■□□□□ 0.38
SMAD1-216ENST00000515527 ZKSCAN4Q969J2 545 aaPredicted RBP17.42■□□□□ 0.38
SMAD1-216ENST00000515527 PRKAG2Q9UGJ0 569 aa17.42■□□□□ 0.38
SMAD1-216ENST00000515527 CYP2C8P10632 490 aa17.41■□□□□ 0.38
SMAD1-216ENST00000515527 CERS5Q8N5B7 392 aa17.41■□□□□ 0.38
SMAD1-216ENST00000515527 TEPSINQ96N21 525 aa17.41■□□□□ 0.38
SMAD1-216ENST00000515527 WRNIP1Q96S55 665 aa17.41■□□□□ 0.38
SMAD1-216ENST00000515527 TMEM39BQ9GZU3 492 aa17.41■□□□□ 0.38
SMAD1-216ENST00000515527 HMGCRP04035 888 aa17.4■□□□□ 0.38
SMAD1-216ENST00000515527 COA7Q96BR5 231 aa17.4■□□□□ 0.38
SMAD1-216ENST00000515527 ISCA1Q9BUE6 129 aa17.4■□□□□ 0.38
SMAD1-216ENST00000515527 TCP10L2B9ZVM9 353 aa17.39■□□□□ 0.37
SMAD1-216ENST00000515527 HSP90B1P14625 803 aaKnown RBP17.39■□□□□ 0.37
SMAD1-216ENST00000515527 EIF4G2P78344 907 aaKnown RBP eCLIP17.39■□□□□ 0.37
SMAD1-216ENST00000515527 PDE3AQ14432 1141 aa17.39■□□□□ 0.37
SMAD1-216ENST00000515527 ZNF70Q9UC06 446 aaPredicted RBP17.39■□□□□ 0.37
SMAD1-216ENST00000515527 SPEF2Q9C093 1822 aa17.39■□□□□ 0.37
SMAD1-216ENST00000515527 ARAP2Q8WZ64 1704 aa17.38■□□□□ 0.37
SMAD1-216ENST00000515527 COL6A1P12109 1028 aa17.38■□□□□ 0.37
SMAD1-216ENST00000515527 PPATQ06203 517 aa17.38■□□□□ 0.37
SMAD1-216ENST00000515527 POTEEQ6S8J3 1075 aa17.38■□□□□ 0.37
SMAD1-216ENST00000515527 GAS2L1Q99501 681 aaPredicted RBP17.38■□□□□ 0.37
SMAD1-216ENST00000515527 MINPP1Q9UNW1 487 aa17.38■□□□□ 0.37
SMAD1-216ENST00000515527 MYO9BQ13459 2157 aa17.38■□□□□ 0.37
SMAD1-216ENST00000515527 TNNI2P48788 182 aa17.37■□□□□ 0.37
SMAD1-216ENST00000515527 TRIM32Q13049 653 aa17.37■□□□□ 0.37
SMAD1-216ENST00000515527 SPDYE2Q495Y8 402 aa17.37■□□□□ 0.37
SMAD1-216ENST00000515527 TDRD3Q9H7E2 651 aaKnown RBP17.37■□□□□ 0.37
SMAD1-216ENST00000515527 LTBP2Q14767 1821 aa17.37■□□□□ 0.37
SMAD1-216ENST00000515527 CCDC85BQ15834 202 aaPredicted RBP17.36■□□□□ 0.37
SMAD1-216ENST00000515527 RIC3Q7Z5B4 369 aa17.36■□□□□ 0.37
SMAD1-216ENST00000515527 PLBD2Q8NHP8 589 aa17.36■□□□□ 0.37
SMAD1-216ENST00000515527 FAM86C2PA6NEL3 165 aa17.35■□□□□ 0.37
SMAD1-216ENST00000515527 U2AF1L5P0DN76 240 aaPredicted RBP17.35■□□□□ 0.37
SMAD1-216ENST00000515527 KLRK1P26718 216 aa17.35■□□□□ 0.37
SMAD1-216ENST00000515527 U2AF1Q01081 240 aaKnown RBP eCLIP17.35■□□□□ 0.37
SMAD1-216ENST00000515527 CC2D1BQ5T0F9 858 aaKnown RBP17.35■□□□□ 0.37
SMAD1-216ENST00000515527 CDC5LQ99459 802 aaKnown RBP17.35■□□□□ 0.37
SMAD1-216ENST00000515527 KCNH4Q9UQ05 1017 aa17.35■□□□□ 0.37
SMAD1-216ENST00000515527 MAST2Q6P0Q8 1798 aa17.35■□□□□ 0.37
SMAD1-216ENST00000515527 GPR37L1O60883 481 aa17.34■□□□□ 0.37
SMAD1-216ENST00000515527 LEMD3Q9Y2U8 911 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms