RNA–Protein interactions for RNA: ENST00000515160.5

CAST-243, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-243ENST00000515160 KCNH4Q9UQ05 1017 aa8.02□□□□□ -1.13
CAST-243ENST00000515160 DENND4BO75064 1496 aaPredicted RBP8.01□□□□□ -1.13
CAST-243ENST00000515160 FBXO24O75426 580 aa8.01□□□□□ -1.13
CAST-243ENST00000515160 KCNQ4P56696 695 aa8.01□□□□□ -1.13
CAST-243ENST00000515160 CCINQ13939 588 aa8.01□□□□□ -1.13
CAST-243ENST00000515160 C6orf118Q5T5N4 469 aa8.01□□□□□ -1.13
CAST-243ENST00000515160 FBXL19Q6PCT2 694 aa8.01□□□□□ -1.13
CAST-243ENST00000515160 PHC3Q8NDX5 983 aa8.01□□□□□ -1.13
CAST-243ENST00000515160 CEP44Q9C0F1 390 aa8.01□□□□□ -1.13
CAST-243ENST00000515160 RUBCNLQ9H714 662 aa8.01□□□□□ -1.13
CAST-243ENST00000515160 KCNQ5Q9NR82 932 aa8.01□□□□□ -1.13
CAST-243ENST00000515160 R3HCC1Q9Y3T6 440 aaKnown RBP8.01□□□□□ -1.13
CAST-243ENST00000515160 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.01□□□□□ -1.13
CAST-243ENST00000515160 ZFYVE16Q7Z3T8 1539 aa8□□□□□ -1.13
CAST-243ENST00000515160 GREM1O60565 184 aa8□□□□□ -1.13
CAST-243ENST00000515160 MMP20O60882 483 aa8□□□□□ -1.13
CAST-243ENST00000515160 IGHA1P01876 353 aa8□□□□□ -1.13
CAST-243ENST00000515160 LIG3P49916 1009 aa8□□□□□ -1.13
CAST-243ENST00000515160 RAB33AQ14088 237 aa8□□□□□ -1.13
CAST-243ENST00000515160 TPTE2Q6XPS3 522 aa8□□□□□ -1.13
CAST-243ENST00000515160 KRT25Q7Z3Z0 450 aa8□□□□□ -1.13
CAST-243ENST00000515160 TCF12Q99081 682 aa8□□□□□ -1.13
CAST-243ENST00000515160 AKNAQ7Z591 1439 aa8□□□□□ -1.13
CAST-243ENST00000515160 MED1Q15648 1581 aaPredicted RBP8□□□□□ -1.13
CAST-243ENST00000515160 HECW1Q76N89 1606 aa8□□□□□ -1.13
CAST-243ENST00000515160 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.99□□□□□ -1.13
CAST-243ENST00000515160 KLF4O43474 513 aa7.99□□□□□ -1.13
CAST-243ENST00000515160 PF4P02776 101 aa7.99□□□□□ -1.13
CAST-243ENST00000515160 F11P03951 625 aa7.99□□□□□ -1.13
CAST-243ENST00000515160 RARAP10276 462 aa7.99□□□□□ -1.13
CAST-243ENST00000515160 IBSPP21815 317 aaPredicted RBP7.99□□□□□ -1.13
CAST-243ENST00000515160 TARSP26639 723 aaKnown RBP7.99□□□□□ -1.13
CAST-243ENST00000515160 LMNB2Q03252 620 aa7.99□□□□□ -1.13
CAST-243ENST00000515160 FAM160A1Q05DH4 1040 aa7.99□□□□□ -1.13
CAST-243ENST00000515160 PTPROQ16827 1216 aa7.99□□□□□ -1.13
CAST-243ENST00000515160 SNAP47Q5SQN1 464 aa7.99□□□□□ -1.13
CAST-243ENST00000515160 RNF187Q5TA31 235 aaPredicted RBP7.99□□□□□ -1.13
CAST-243ENST00000515160 POGZQ7Z3K3 1410 aa7.99□□□□□ -1.13
CAST-243ENST00000515160 NCAPG2Q86XI2 1143 aa7.99□□□□□ -1.13
CAST-243ENST00000515160 NKD1Q969G9 470 aa7.99□□□□□ -1.13
CAST-243ENST00000515160 TLR6Q9Y2C9 796 aa7.99□□□□□ -1.13
CAST-243ENST00000515160 GOLGA3Q08378 1498 aa7.99□□□□□ -1.13
CAST-243ENST00000515160 TTLL8A6PVC2 850 aa7.98□□□□□ -1.13
CAST-243ENST00000515160 ENPP3O14638 875 aa7.98□□□□□ -1.13
CAST-243ENST00000515160 GARTP22102 1010 aa7.98□□□□□ -1.13
CAST-243ENST00000515160 IGBP1P78318 339 aa7.98□□□□□ -1.13
CAST-243ENST00000515160 APOBRQ0VD83 1088 aa7.98□□□□□ -1.13
CAST-243ENST00000515160 CAMK2GQ13555 558 aaPredicted RBP7.98□□□□□ -1.13
CAST-243ENST00000515160 MLECQ14165 292 aa7.98□□□□□ -1.13
CAST-243ENST00000515160 EFHC2Q5JST6 749 aa7.98□□□□□ -1.13
CAST-243ENST00000515160 MRPL14Q6P1L8 145 aaKnown RBP7.98□□□□□ -1.13
CAST-243ENST00000515160 CCNJLQ8IV13 435 aa7.98□□□□□ -1.13
CAST-243ENST00000515160 GOLM1Q8NBJ4 401 aa7.98□□□□□ -1.13
CAST-243ENST00000515160 HNRNPLLQ8WVV9 542 aaKnown RBP7.98□□□□□ -1.13
CAST-243ENST00000515160 ANAPC16Q96DE5 110 aa7.98□□□□□ -1.13
CAST-243ENST00000515160 OSMRQ99650 979 aa7.98□□□□□ -1.13
CAST-243ENST00000515160 SRRTQ9BXP5 876 aaKnown RBP7.98□□□□□ -1.13
CAST-243ENST00000515160 GSX2Q9BZM3 304 aa7.98□□□□□ -1.13
CAST-243ENST00000515160 UBP1Q9NZI7 540 aa7.98□□□□□ -1.13
CAST-243ENST00000515160 PRKAG3Q9UGI9 489 aa7.98□□□□□ -1.13
CAST-243ENST00000515160 DYRK1BQ9Y463 629 aa7.98□□□□□ -1.13
CAST-243ENST00000515160 SETD1BQ9UPS6 1966 aaKnown RBP7.98□□□□□ -1.13
CAST-243ENST00000515160 EFCAB5A4FU69 1503 aa7.98□□□□□ -1.13
CAST-243ENST00000515160 hCG_2014768A0A024R1R8 64 aa7.97□□□□□ -1.13
CAST-243ENST00000515160 FIGNL2A6NMB9 653 aa7.97□□□□□ -1.13
CAST-243ENST00000515160 PSAPP07602 524 aa7.97□□□□□ -1.13
CAST-243ENST00000515160 CELA3AP09093 270 aa7.97□□□□□ -1.13
CAST-243ENST00000515160 PCNX4Q63HM2 1172 aa7.97□□□□□ -1.13
CAST-243ENST00000515160 KCNB2Q92953 911 aa7.97□□□□□ -1.13
CAST-243ENST00000515160 GPATCH3Q96I76 525 aa7.97□□□□□ -1.13
CAST-243ENST00000515160 RNPC3Q96LT9 517 aaKnown RBP7.97□□□□□ -1.13
CAST-243ENST00000515160 PNMA5Q96PV4 448 aa7.97□□□□□ -1.13
CAST-243ENST00000515160 ZKSCAN3Q9BRR0 538 aa7.97□□□□□ -1.13
CAST-243ENST00000515160 SNTG2Q9NY99 539 aa7.97□□□□□ -1.13
CAST-243ENST00000515160 MAGI2Q86UL8 1455 aa7.97□□□□□ -1.13
CAST-243ENST00000515160 NCOA1Q15788 1441 aa7.96□□□□□ -1.13
CAST-243ENST00000515160 SFSWAPQ12872 951 aaKnown RBP7.96□□□□□ -1.14
CAST-243ENST00000515160 HYAL2Q12891 473 aa7.96□□□□□ -1.14
CAST-243ENST00000515160 LRP10Q7Z4F1 713 aa7.96□□□□□ -1.14
CAST-243ENST00000515160 ZCRB1Q8TBF4 217 aaKnown RBP7.96□□□□□ -1.14
CAST-243ENST00000515160 CNTNAP3BQ96NU0 1288 aa7.96□□□□□ -1.14
CAST-243ENST00000515160 DEPDC7Q96QD5 511 aa7.96□□□□□ -1.14
CAST-243ENST00000515160 GAS2L1Q99501 681 aaPredicted RBP7.96□□□□□ -1.14
CAST-243ENST00000515160 KRTAP9-2Q9BYQ4 174 aa7.96□□□□□ -1.14
CAST-243ENST00000515160 CNTNAP3Q9BZ76 1288 aa7.96□□□□□ -1.14
CAST-243ENST00000515160 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.96□□□□□ -1.14
CAST-243ENST00000515160 ROBO2Q9HCK4 1378 aa7.96□□□□□ -1.14
CAST-243ENST00000515160 C3P01024 1663 aa7.95□□□□□ -1.14
CAST-243ENST00000515160 UHRF1BP1Q6BDS2 1440 aa7.95□□□□□ -1.14
CAST-243ENST00000515160 NUP153P49790 1475 aaKnown RBP7.95□□□□□ -1.14
CAST-243ENST00000515160 ATXN7O15265 892 aaPredicted RBP7.95□□□□□ -1.14
CAST-243ENST00000515160 KIF4AO95239 1232 aa7.95□□□□□ -1.14
CAST-243ENST00000515160 FAM157BP0CG42 384 aa7.95□□□□□ -1.14
CAST-243ENST00000515160 SOX18P35713 384 aa7.95□□□□□ -1.14
CAST-243ENST00000515160 TTBK2Q6IQ55 1244 aa7.95□□□□□ -1.14
CAST-243ENST00000515160 GPAT2Q6NUI2 795 aa7.95□□□□□ -1.14
CAST-243ENST00000515160 FIGNL1Q6PIW4 674 aa7.95□□□□□ -1.14
CAST-243ENST00000515160 AGMOQ6ZNB7 445 aa7.95□□□□□ -1.14
CAST-243ENST00000515160 SLITRK4Q8IW52 837 aa7.95□□□□□ -1.14
CAST-243ENST00000515160 TLR7Q9NYK1 1049 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms