RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 FRMPD2Q68DX3 1309 aaPredicted RBP16.36■□□□□ 0.21
TRIO-222ENST00000515144 CEP152O94986 1710 aa16.36■□□□□ 0.21
TRIO-222ENST00000515144 EEF2P13639 858 aaKnown RBP16.36■□□□□ 0.21
TRIO-222ENST00000515144 CALML3P27482 149 aa16.36■□□□□ 0.21
TRIO-222ENST00000515144 RAD51AP2Q09MP3 1159 aa16.36■□□□□ 0.21
TRIO-222ENST00000515144 ASAP1Q9ULH1 1129 aa16.36■□□□□ 0.21
TRIO-222ENST00000515144 ERCC3P19447 782 aa16.35■□□□□ 0.21
TRIO-222ENST00000515144 STX1AQ16623 288 aa16.35■□□□□ 0.21
TRIO-222ENST00000515144 FAM47AQ5JRC9 791 aa16.35■□□□□ 0.21
TRIO-222ENST00000515144 CCDC171Q6TFL3 1326 aa16.35■□□□□ 0.21
TRIO-222ENST00000515144 FAM114A1Q8IWE2 563 aa16.35■□□□□ 0.21
TRIO-222ENST00000515144 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.35■□□□□ 0.21
TRIO-222ENST00000515144 KRT5P13647 590 aa16.35■□□□□ 0.21
TRIO-222ENST00000515144 KRT27Q7Z3Y8 459 aa16.35■□□□□ 0.21
TRIO-222ENST00000515144 WDR66Q8TBY9 1149 aa16.35■□□□□ 0.21
TRIO-222ENST00000515144 ZNF496Q96IT1 587 aaPredicted RBP16.35■□□□□ 0.21
TRIO-222ENST00000515144 JADE2Q9NQC1 790 aa16.35■□□□□ 0.21
TRIO-222ENST00000515144 ZNF335Q9H4Z2 1342 aaPredicted RBP16.35■□□□□ 0.21
TRIO-222ENST00000515144 CLRN2A0PK11 232 aa16.35■□□□□ 0.21
TRIO-222ENST00000515144 VWA3AA6NCI4 1184 aa16.35■□□□□ 0.21
TRIO-222ENST00000515144 USP25Q9UHP3 1055 aa16.35■□□□□ 0.21
TRIO-222ENST00000515144 ABT1Q9ULW3 272 aaKnown RBP16.35■□□□□ 0.21
TRIO-222ENST00000515144 N4BP3O15049 544 aa16.35■□□□□ 0.21
TRIO-222ENST00000515144 BMP2KLQ5H9B9 411 aa16.35■□□□□ 0.21
TRIO-222ENST00000515144 TTLL7Q6ZT98 887 aa16.35■□□□□ 0.21
TRIO-222ENST00000515144 SUPT20HQ8NEM7 779 aa16.35■□□□□ 0.21
TRIO-222ENST00000515144 PABPN1LA6NDY0 278 aaKnown RBP16.35■□□□□ 0.21
TRIO-222ENST00000515144 METTL13Q8N6R0 699 aa16.35■□□□□ 0.21
TRIO-222ENST00000515144 CTSWP56202 376 aa16.34■□□□□ 0.21
TRIO-222ENST00000515144 TRAF1Q13077 416 aa16.34■□□□□ 0.21
TRIO-222ENST00000515144 TMEM94Q12767 1356 aa16.34■□□□□ 0.21
TRIO-222ENST00000515144 KIAA0232Q92628 1395 aa16.34■□□□□ 0.21
TRIO-222ENST00000515144 CFBP00751 764 aa16.34■□□□□ 0.21
TRIO-222ENST00000515144 RLBP1P12271 317 aa16.34■□□□□ 0.21
TRIO-222ENST00000515144 SMC1AQ14683 1233 aaKnown RBP16.34■□□□□ 0.21
TRIO-222ENST00000515144 MYL10Q9BUA6 226 aa16.34■□□□□ 0.21
TRIO-222ENST00000515144 SH2D4AQ9H788 454 aa16.34■□□□□ 0.21
TRIO-222ENST00000515144 GYG1P46976 350 aa16.34■□□□□ 0.21
TRIO-222ENST00000515144 SULF1Q8IWU6 871 aa16.34■□□□□ 0.21
TRIO-222ENST00000515144 SUCLG2Q96I99 432 aa16.34■□□□□ 0.21
TRIO-222ENST00000515144 STX17P56962 302 aa16.34■□□□□ 0.21
TRIO-222ENST00000515144 TNNI3KQ59H18 835 aa16.34■□□□□ 0.21
TRIO-222ENST00000515144 FPGT-TNNI3KV9GXZ4 949 aa16.34■□□□□ 0.21
TRIO-222ENST00000515144 FAM196AQ6ZSG2 479 aa16.34■□□□□ 0.21
TRIO-222ENST00000515144 ZSWIM4Q9H7M6 989 aa16.34■□□□□ 0.21
TRIO-222ENST00000515144 MAPKBP1O60336 1514 aa16.33■□□□□ 0.21
TRIO-222ENST00000515144 KANK3Q6NY19 840 aa16.33■□□□□ 0.21
TRIO-222ENST00000515144 DBNDD2Q9BQY9 259 aa16.33■□□□□ 0.21
TRIO-222ENST00000515144 CTAGE5O15320 804 aa16.33■□□□□ 0.21
TRIO-222ENST00000515144 USPL1Q5W0Q7 1092 aa16.33■□□□□ 0.21
TRIO-222ENST00000515144 NSMFQ6X4W1 530 aa16.33■□□□□ 0.21
TRIO-222ENST00000515144 SLC1A4P43007 532 aa16.33■□□□□ 0.2
TRIO-222ENST00000515144 SHROOM2Q13796 1616 aa16.33■□□□□ 0.2
TRIO-222ENST00000515144 GOLGA6L10A0A0M3HER8 536 aa16.33■□□□□ 0.2
TRIO-222ENST00000515144 IL13P35225 146 aa16.33■□□□□ 0.2
TRIO-222ENST00000515144 DNM1Q05193 864 aaKnown RBP16.33■□□□□ 0.2
TRIO-222ENST00000515144 PTPN14Q15678 1187 aa16.33■□□□□ 0.2
TRIO-222ENST00000515144 GPAA1O43292 621 aa16.33■□□□□ 0.2
TRIO-222ENST00000515144 RNF169Q8NCN4 708 aa16.33■□□□□ 0.2
TRIO-222ENST00000515144 GNA11P29992 359 aa16.32■□□□□ 0.2
TRIO-222ENST00000515144 KRT79Q5XKE5 535 aa16.32■□□□□ 0.2
TRIO-222ENST00000515144 SPATA5Q8NB90 893 aa16.32■□□□□ 0.2
TRIO-222ENST00000515144 LRRC27Q9C0I9 530 aa16.32■□□□□ 0.2
TRIO-222ENST00000515144 TBC1D7Q9P0N9 293 aa16.32■□□□□ 0.2
TRIO-222ENST00000515144 KRT9P35527 623 aa16.32■□□□□ 0.2
TRIO-222ENST00000515144 ANO3Q9BYT9 981 aa16.32■□□□□ 0.2
TRIO-222ENST00000515144 SSX2IPQ9Y2D8 614 aa16.32■□□□□ 0.2
TRIO-222ENST00000515144 USP19O94966 1318 aa16.32■□□□□ 0.2
TRIO-222ENST00000515144 PDIA4P13667 645 aaKnown RBP16.32■□□□□ 0.2
TRIO-222ENST00000515144 TTC37Q6PGP7 1564 aa16.32■□□□□ 0.2
TRIO-222ENST00000515144 SPECC1Q5M775 1068 aa16.32■□□□□ 0.2
TRIO-222ENST00000515144 CCDC91Q7Z6B0 441 aa16.32■□□□□ 0.2
TRIO-222ENST00000515144 CMTR1Q8N1G2 835 aaKnown RBP16.32■□□□□ 0.2
TRIO-222ENST00000515144 UQCRHLA0A096LP55 91 aa16.31■□□□□ 0.2
TRIO-222ENST00000515144 UQCRHP07919 91 aa16.31■□□□□ 0.2
TRIO-222ENST00000515144 UBASH3AP57075 661 aa16.31■□□□□ 0.2
TRIO-222ENST00000515144 MAP2K1Q02750 393 aaPredicted RBP16.31■□□□□ 0.2
TRIO-222ENST00000515144 FAM227BQ96M60 508 aa16.31■□□□□ 0.2
TRIO-222ENST00000515144 ZBED4O75132 1171 aa16.31■□□□□ 0.2
TRIO-222ENST00000515144 CCDC50Q8IVM0 306 aa16.31■□□□□ 0.2
TRIO-222ENST00000515144 ZSCAN16Q9H4T2 348 aaPredicted RBP16.31■□□□□ 0.2
TRIO-222ENST00000515144 ZAP70P43403 619 aa16.31■□□□□ 0.2
TRIO-222ENST00000515144 NCAPH2Q6IBW4 605 aa16.31■□□□□ 0.2
TRIO-222ENST00000515144 RNF216Q9NWF9 866 aaPredicted RBP16.31■□□□□ 0.2
TRIO-222ENST00000515144 PLXNC1O60486 1568 aa16.31■□□□□ 0.2
TRIO-222ENST00000515144 ZNF532Q9HCE3 1301 aa16.31■□□□□ 0.2
TRIO-222ENST00000515144 CRKLP46109 303 aaKnown RBP16.31■□□□□ 0.2
TRIO-222ENST00000515144 MAPK8IP1Q9UQF2 711 aa16.31■□□□□ 0.2
TRIO-222ENST00000515144 LOC102724428A0A0B4J2F2 783 aa16.31■□□□□ 0.2
TRIO-222ENST00000515144 SIK1P57059 783 aa16.31■□□□□ 0.2
TRIO-222ENST00000515144 C16orf45Q96MC5 204 aaPredicted RBP16.31■□□□□ 0.2
TRIO-222ENST00000515144 SPAG5Q96R06 1193 aa16.31■□□□□ 0.2
TRIO-222ENST00000515144 HECW2Q9P2P5 1572 aa16.31■□□□□ 0.2
TRIO-222ENST00000515144 AK2P54819 239 aa16.31■□□□□ 0.2
TRIO-222ENST00000515144 BRDTQ58F21 947 aaPredicted RBP16.31■□□□□ 0.2
TRIO-222ENST00000515144 SDR42E1Q8WUS8 393 aa16.31■□□□□ 0.2
TRIO-222ENST00000515144 TEKT1Q969V4 418 aa16.31■□□□□ 0.2
TRIO-222ENST00000515144 FERMT1Q9BQL6 677 aa16.31■□□□□ 0.2
TRIO-222ENST00000515144 DBNDD1Q9H9R9 158 aa16.31■□□□□ 0.2
TRIO-222ENST00000515144 RMND1Q9NWS8 449 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms