RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 K7ELQ4 463 aaPredicted RBP19.06■□□□□ 0.64
NUP54-214ENST00000514307 ZNF213O14771 459 aa19.06■□□□□ 0.64
NUP54-214ENST00000514307 SLC4A3P48751 1232 aa19.06■□□□□ 0.64
NUP54-214ENST00000514307 DZIP1Q86YF9 867 aaKnown RBP19.06■□□□□ 0.64
NUP54-214ENST00000514307 NSUN4Q96CB9 384 aaKnown RBP19.06■□□□□ 0.64
NUP54-214ENST00000514307 JAKMIP1Q96N16 626 aaKnown RBP19.06■□□□□ 0.64
NUP54-214ENST00000514307 NOL10Q9BSC4 688 aaKnown RBP19.06■□□□□ 0.64
NUP54-214ENST00000514307 C10orf71Q711Q0 1435 aa19.06■□□□□ 0.64
NUP54-214ENST00000514307 BAG3O95817 575 aa19.05■□□□□ 0.64
NUP54-214ENST00000514307 FGAP02671 866 aa19.05■□□□□ 0.64
NUP54-214ENST00000514307 HSP90AA1P07900 732 aaKnown RBP19.05■□□□□ 0.64
NUP54-214ENST00000514307 MECOMQ03112 1051 aa19.05■□□□□ 0.64
NUP54-214ENST00000514307 CCDC93Q567U6 631 aa19.05■□□□□ 0.64
NUP54-214ENST00000514307 VPS53Q5VIR6 699 aa19.05■□□□□ 0.64
NUP54-214ENST00000514307 RUFY3Q7L099 469 aa19.05■□□□□ 0.64
NUP54-214ENST00000514307 GPR101Q96P66 508 aaPredicted RBP19.05■□□□□ 0.64
NUP54-214ENST00000514307 AK9Q5TCS8 1911 aa19.05■□□□□ 0.64
NUP54-214ENST00000514307 ARAP2Q8WZ64 1704 aa19.05■□□□□ 0.64
NUP54-214ENST00000514307 C21orf2O43822 256 aa19.04■□□□□ 0.64
NUP54-214ENST00000514307 MBD4O95243 580 aa19.04■□□□□ 0.64
NUP54-214ENST00000514307 CASTP20810 708 aaKnown RBP19.04■□□□□ 0.64
NUP54-214ENST00000514307 TAF1P21675 1872 aa19.04■□□□□ 0.64
NUP54-214ENST00000514307 ANKRD1Q15327 319 aa19.04■□□□□ 0.64
NUP54-214ENST00000514307 BLOC1S2Q6QNY1 142 aa19.04■□□□□ 0.64
NUP54-214ENST00000514307 NEK1Q96PY6 1258 aa19.04■□□□□ 0.64
NUP54-214ENST00000514307 ALDH8A1Q9H2A2 487 aaPredicted RBP19.04■□□□□ 0.64
NUP54-214ENST00000514307 PDRG1Q9NUG6 133 aa19.04■□□□□ 0.64
NUP54-214ENST00000514307 ZNF219Q9P2Y4 722 aaPredicted RBP19.04■□□□□ 0.64
NUP54-214ENST00000514307 KCNA3P22001 575 aa19.03■□□□□ 0.64
NUP54-214ENST00000514307 DALRD3Q5D0E6 543 aaKnown RBP19.03■□□□□ 0.64
NUP54-214ENST00000514307 TTLL5Q6EMB2 1281 aa19.03■□□□□ 0.64
NUP54-214ENST00000514307 ARMT1Q9H993 441 aa19.03■□□□□ 0.64
NUP54-214ENST00000514307 SLC4A4Q9Y6R1 1079 aa19.03■□□□□ 0.64
NUP54-214ENST00000514307 CYP21A2P08686 494 aa19.02■□□□□ 0.64
NUP54-214ENST00000514307 GTF2IP78347 998 aa19.02■□□□□ 0.64
NUP54-214ENST00000514307 GIMAP6Q6P9H5 292 aa19.02■□□□□ 0.64
NUP54-214ENST00000514307 OLFM4Q6UX06 510 aa19.02■□□□□ 0.64
NUP54-214ENST00000514307 IFNL3Q8IZI9 196 aa19.02■□□□□ 0.64
NUP54-214ENST00000514307 ZSCAN31Q96LW9 406 aaPredicted RBP19.02■□□□□ 0.64
NUP54-214ENST00000514307 CRNKL1Q9BZJ0 848 aaKnown RBP19.02■□□□□ 0.64
NUP54-214ENST00000514307 DOK7Q18PE1 504 aa19.01■□□□□ 0.63
NUP54-214ENST00000514307 MFSD14BQ5SR56 506 aa19.01■□□□□ 0.63
NUP54-214ENST00000514307 PSMD1Q99460 953 aa19.01■□□□□ 0.63
NUP54-214ENST00000514307 UPF3BQ9BZI7 483 aaKnown RBP19.01■□□□□ 0.63
NUP54-214ENST00000514307 NAPBQ9H115 298 aa19.01■□□□□ 0.63
NUP54-214ENST00000514307 PPP1R1BQ9UD71 204 aaPredicted RBP19.01■□□□□ 0.63
NUP54-214ENST00000514307 ZMYM6O95789 1325 aa19■□□□□ 0.63
NUP54-214ENST00000514307 PRDX5P30044 214 aa19■□□□□ 0.63
NUP54-214ENST00000514307 PPP4CP60510 307 aa19■□□□□ 0.63
NUP54-214ENST00000514307 FKBP1AP62942 108 aaKnown RBP19■□□□□ 0.63
NUP54-214ENST00000514307 TRDNQ13061 729 aa19■□□□□ 0.63
NUP54-214ENST00000514307 MIGA1Q8NAN2 632 aa19■□□□□ 0.63
NUP54-214ENST00000514307 FAM163AQ96GL9 167 aaPredicted RBP19■□□□□ 0.63
NUP54-214ENST00000514307 LIMCH1Q9UPQ0 1083 aa19■□□□□ 0.63
NUP54-214ENST00000514307 ANKRD31Q8N7Z5 1873 aa19■□□□□ 0.63
NUP54-214ENST00000514307 AKAP11Q9UKA4 1901 aa19■□□□□ 0.63
NUP54-214ENST00000514307 GSG1L2A8MUP6 293 aa18.99■□□□□ 0.63
NUP54-214ENST00000514307 PLCG2P16885 1265 aa18.99■□□□□ 0.63
NUP54-214ENST00000514307 RPS6KB1P23443 525 aa18.99■□□□□ 0.63
NUP54-214ENST00000514307 KIAA2012Q0VF49 1180 aa18.99■□□□□ 0.63
NUP54-214ENST00000514307 ADCK5Q3MIX3 580 aa18.99■□□□□ 0.63
NUP54-214ENST00000514307 STRIP1Q5VSL9 837 aa18.99■□□□□ 0.63
NUP54-214ENST00000514307 DHX32Q7L7V1 743 aaKnown RBP18.99■□□□□ 0.63
NUP54-214ENST00000514307 SLC51AQ86UW1 340 aa18.99■□□□□ 0.63
NUP54-214ENST00000514307 LCORLQ8N3X6 602 aa18.99■□□□□ 0.63
NUP54-214ENST00000514307 RIOK1Q9BRS2 568 aaKnown RBP18.99■□□□□ 0.63
NUP54-214ENST00000514307 SPON1Q9HCB6 807 aa18.99■□□□□ 0.63
NUP54-214ENST00000514307 ATP8A2Q9NTI2 1148 aa18.99■□□□□ 0.63
NUP54-214ENST00000514307 E7EWF7 191 aa18.98■□□□□ 0.63
NUP54-214ENST00000514307 TDO2P48775 406 aa18.98■□□□□ 0.63
NUP54-214ENST00000514307 FBXW7Q969H0 707 aa18.98■□□□□ 0.63
NUP54-214ENST00000514307 CHMP4CQ96CF2 233 aa18.98■□□□□ 0.63
NUP54-214ENST00000514307 SGIP1Q9BQI5 828 aa18.98■□□□□ 0.63
NUP54-214ENST00000514307 MRIQ9BWK5 157 aa18.98■□□□□ 0.63
NUP54-214ENST00000514307 CWC22Q9HCG8 908 aaKnown RBP18.98■□□□□ 0.63
NUP54-214ENST00000514307 JAG2Q9Y219 1238 aa18.98■□□□□ 0.63
NUP54-214ENST00000514307 USP17L3A6NCW0 530 aa18.97■□□□□ 0.63
NUP54-214ENST00000514307 USP17L4A6NCW7 530 aa18.97■□□□□ 0.63
NUP54-214ENST00000514307 FGD1P98174 961 aa18.97■□□□□ 0.63
NUP54-214ENST00000514307 USP17L1Q7RTZ2 530 aa18.97■□□□□ 0.63
NUP54-214ENST00000514307 NCOA7Q8NI08 942 aa18.97■□□□□ 0.63
NUP54-214ENST00000514307 TTC14Q96N46 770 aa18.97■□□□□ 0.63
NUP54-214ENST00000514307 COL1A1P02452 1464 aaPredicted RBP18.97■□□□□ 0.63
NUP54-214ENST00000514307 PPIP5K2O43314 1243 aa18.96■□□□□ 0.63
NUP54-214ENST00000514307 RALYLQ86SE5 291 aaKnown RBP18.96■□□□□ 0.63
NUP54-214ENST00000514307 ADGRA1Q86SQ6 560 aa18.96■□□□□ 0.63
NUP54-214ENST00000514307 RNF41Q9H4P4 317 aaPredicted RBP18.96■□□□□ 0.63
NUP54-214ENST00000514307 CNNM2Q9H8M5 875 aa18.96■□□□□ 0.63
NUP54-214ENST00000514307 SH2B1Q9NRF2 756 aaPredicted RBP18.96■□□□□ 0.63
NUP54-214ENST00000514307 GPR75-ASB3A0A0A6YYF3 556 aa18.95■□□□□ 0.62
NUP54-214ENST00000514307 FOXP2O15409 715 aa18.95■□□□□ 0.62
NUP54-214ENST00000514307 PRKAB2O43741 272 aa18.95■□□□□ 0.62
NUP54-214ENST00000514307 ECE2O60344 883 aa18.95■□□□□ 0.62
NUP54-214ENST00000514307 CD2BP2O95400 341 aaKnown RBP18.95■□□□□ 0.62
NUP54-214ENST00000514307 SLC3A2P08195 630 aaKnown RBP18.95■□□□□ 0.62
NUP54-214ENST00000514307 AK2P54819 239 aa18.95■□□□□ 0.62
NUP54-214ENST00000514307 DYNLL1P63167 89 aaKnown RBP18.95■□□□□ 0.62
NUP54-214ENST00000514307 AMOTL1Q8IY63 956 aa18.95■□□□□ 0.62
NUP54-214ENST00000514307 KLHL34Q8N239 644 aa18.95■□□□□ 0.62
NUP54-214ENST00000514307 ZNF384Q8TF68 577 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms