RNA–Protein interactions for RNA: ENST00000514013.1

SH3D19-209, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-209ENST00000514013 KIAA0825Q8IV33 1275 aa11.82□□□□□ -0.52
SH3D19-209ENST00000514013 ZBTB38Q8NAP3 1195 aaPredicted RBP11.82□□□□□ -0.52
SH3D19-209ENST00000514013 BABAM1Q9NWV8 329 aa11.82□□□□□ -0.52
SH3D19-209ENST00000514013 VPS9D1Q9Y2B5 631 aa11.82□□□□□ -0.52
SH3D19-209ENST00000514013 PTCH2Q9Y6C5 1203 aa11.82□□□□□ -0.52
SH3D19-209ENST00000514013 CHL1O00533 1208 aa11.81□□□□□ -0.52
SH3D19-209ENST00000514013 ZBTB48P10074 688 aaPredicted RBP11.81□□□□□ -0.52
SH3D19-209ENST00000514013 ATP2B4P23634 1241 aa11.81□□□□□ -0.52
SH3D19-209ENST00000514013 MAP3K11Q16584 847 aa11.81□□□□□ -0.52
SH3D19-209ENST00000514013 APOBEC3FQ8IUX4 373 aaKnown RBP11.81□□□□□ -0.52
SH3D19-209ENST00000514013 OGFOD1Q8N543 542 aa11.81□□□□□ -0.52
SH3D19-209ENST00000514013 FBXW7Q969H0 707 aa11.81□□□□□ -0.52
SH3D19-209ENST00000514013 SLC10A4Q96EP9 437 aa11.81□□□□□ -0.52
SH3D19-209ENST00000514013 RBM27Q9P2N5 1060 aaKnown RBP11.81□□□□□ -0.52
SH3D19-209ENST00000514013 TMPOP42166 694 aaKnown RBP11.8□□□□□ -0.52
SH3D19-209ENST00000514013 PTPN5P54829 565 aa11.8□□□□□ -0.52
SH3D19-209ENST00000514013 INHBEP58166 350 aa11.8□□□□□ -0.52
SH3D19-209ENST00000514013 SP3Q02447 781 aa11.8□□□□□ -0.52
SH3D19-209ENST00000514013 CCDC152Q4G0S7 254 aa11.8□□□□□ -0.52
SH3D19-209ENST00000514013 STRIP1Q5VSL9 837 aa11.8□□□□□ -0.52
SH3D19-209ENST00000514013 DEFB129Q9H1M3 183 aa11.8□□□□□ -0.52
SH3D19-209ENST00000514013 MINPP1Q9UNW1 487 aa11.8□□□□□ -0.52
SH3D19-209ENST00000514013 ANKRD18AQ8IVF6 992 aa11.79□□□□□ -0.52
SH3D19-209ENST00000514013 CCER1Q8TC90 406 aaPredicted RBP11.79□□□□□ -0.52
SH3D19-209ENST00000514013 SHISA4Q96DD7 197 aa11.79□□□□□ -0.52
SH3D19-209ENST00000514013 DBF4Q9UBU7 674 aaPredicted RBP11.79□□□□□ -0.52
SH3D19-209ENST00000514013 MYO3BQ8WXR4 1341 aa11.79□□□□□ -0.52
SH3D19-209ENST00000514013 TESPA1A2RU30 521 aaPredicted RBP11.78□□□□□ -0.52
SH3D19-209ENST00000514013 PDE8AO60658 829 aa11.78□□□□□ -0.52
SH3D19-209ENST00000514013 PCCAP05165 728 aaPredicted RBP11.78□□□□□ -0.52
SH3D19-209ENST00000514013 SLC9C1Q4G0N8 1177 aa11.78□□□□□ -0.52
SH3D19-209ENST00000514013 NBPF12Q5TAG4 269 aaPredicted RBP11.78□□□□□ -0.52
SH3D19-209ENST00000514013 CERS5Q8N5B7 392 aa11.78□□□□□ -0.52
SH3D19-209ENST00000514013 SLC17A8Q8NDX2 589 aa11.78□□□□□ -0.52
SH3D19-209ENST00000514013 SH3TC2Q8TF17 1288 aa11.78□□□□□ -0.52
SH3D19-209ENST00000514013 MYD88Q99836 296 aa11.78□□□□□ -0.52
SH3D19-209ENST00000514013 ARHGAP39Q9C0H5 1083 aa11.78□□□□□ -0.52
SH3D19-209ENST00000514013 PRO3102Q9H379 93 aa11.78□□□□□ -0.52
SH3D19-209ENST00000514013 PHAXQ9H814 394 aaKnown RBP11.78□□□□□ -0.52
SH3D19-209ENST00000514013 COL1A1P02452 1464 aaPredicted RBP11.77□□□□□ -0.52
SH3D19-209ENST00000514013 LAMB1P07942 1786 aa11.77□□□□□ -0.52
SH3D19-209ENST00000514013 CLRN2A0PK11 232 aa11.77□□□□□ -0.53
SH3D19-209ENST00000514013 USP2O75604 605 aaPredicted RBP11.77□□□□□ -0.53
SH3D19-209ENST00000514013 CCT4P50991 539 aaKnown RBP11.77□□□□□ -0.53
SH3D19-209ENST00000514013 SLC4A8Q2Y0W8 1093 aa11.77□□□□□ -0.53
SH3D19-209ENST00000514013 BRI3BPQ8WY22 251 aa11.77□□□□□ -0.53
SH3D19-209ENST00000514013 COA1Q9GZY4 146 aa11.77□□□□□ -0.53
SH3D19-209ENST00000514013 GREM2Q9H772 168 aa11.77□□□□□ -0.53
SH3D19-209ENST00000514013 HYPKQ9NX55 129 aa11.77□□□□□ -0.53
SH3D19-209ENST00000514013 LAS1LQ9Y4W2 734 aaKnown RBP11.77□□□□□ -0.53
SH3D19-209ENST00000514013 SOX1O00570 391 aaPredicted RBP11.76□□□□□ -0.53
SH3D19-209ENST00000514013 CTSWP56202 376 aa11.76□□□□□ -0.53
SH3D19-209ENST00000514013 GTF2IP78347 998 aa11.76□□□□□ -0.53
SH3D19-209ENST00000514013 DUSP27Q5VZP5 1158 aa11.76□□□□□ -0.53
SH3D19-209ENST00000514013 TTLL5Q6EMB2 1281 aa11.76□□□□□ -0.53
SH3D19-209ENST00000514013 RIC3Q7Z5B4 369 aa11.76□□□□□ -0.53
SH3D19-209ENST00000514013 ZNF454Q8N9F8 522 aa11.76□□□□□ -0.53
SH3D19-209ENST00000514013 BSDC1Q9NW68 430 aaPredicted RBP11.76□□□□□ -0.53
SH3D19-209ENST00000514013 ZSWIM8A7E2V4 1837 aa11.75□□□□□ -0.53
SH3D19-209ENST00000514013 SNAP23O00161 211 aa11.75□□□□□ -0.53
SH3D19-209ENST00000514013 PPP1R12BO60237 982 aaPredicted RBP11.75□□□□□ -0.53
SH3D19-209ENST00000514013 HOXB7P09629 217 aa11.75□□□□□ -0.53
SH3D19-209ENST00000514013 MTFR1Q15390 333 aa11.75□□□□□ -0.53
SH3D19-209ENST00000514013 NEUROD2Q15784 382 aa11.75□□□□□ -0.53
SH3D19-209ENST00000514013 FAM43AQ8N2R8 423 aa11.75□□□□□ -0.53
SH3D19-209ENST00000514013 CCDC191Q8NCU4 936 aa11.75□□□□□ -0.53
SH3D19-209ENST00000514013 TTLL11Q8NHH1 800 aa11.75□□□□□ -0.53
SH3D19-209ENST00000514013 OXER1Q8TDS5 423 aa11.75□□□□□ -0.53
SH3D19-209ENST00000514013 ELP3Q9H9T3 547 aa11.75□□□□□ -0.53
SH3D19-209ENST00000514013 CWC25Q9NXE8 425 aaPredicted RBP11.75□□□□□ -0.53
SH3D19-209ENST00000514013 ZNF804BA4D1E1 1349 aa11.75□□□□□ -0.53
SH3D19-209ENST00000514013 IRS2Q9Y4H2 1338 aa11.75□□□□□ -0.53
SH3D19-209ENST00000514013 RGS20O76081 388 aa11.74□□□□□ -0.53
SH3D19-209ENST00000514013 LMOD3Q0VAK6 560 aa11.74□□□□□ -0.53
SH3D19-209ENST00000514013 DLGAP5Q15398 846 aa11.74□□□□□ -0.53
SH3D19-209ENST00000514013 CCDC146Q8IYE0 955 aa11.74□□□□□ -0.53
SH3D19-209ENST00000514013 HS6ST3Q8IZP7 471 aa11.74□□□□□ -0.53
SH3D19-209ENST00000514013 MTMR14Q8NCE2 650 aa11.74□□□□□ -0.53
SH3D19-209ENST00000514013 OPTNQ96CV9 577 aa11.74□□□□□ -0.53
SH3D19-209ENST00000514013 PRMT6Q96LA8 375 aaPredicted RBP11.74□□□□□ -0.53
SH3D19-209ENST00000514013 CDC5LQ99459 802 aaKnown RBP11.74□□□□□ -0.53
SH3D19-209ENST00000514013 SLC4A5Q9BY07 1137 aa11.74□□□□□ -0.53
SH3D19-209ENST00000514013 F8W031 263 aaPredicted RBP11.73□□□□□ -0.53
SH3D19-209ENST00000514013 IGKV5-2P06315 115 aa11.73□□□□□ -0.53
SH3D19-209ENST00000514013 CTGFP29279 349 aa11.73□□□□□ -0.53
SH3D19-209ENST00000514013 RASA3Q14644 834 aa11.73□□□□□ -0.53
SH3D19-209ENST00000514013 TAF1CQ15572 869 aaPredicted RBP11.73□□□□□ -0.53
SH3D19-209ENST00000514013 CFAP100Q494V2 611 aa11.73□□□□□ -0.53
SH3D19-209ENST00000514013 OTUD7BQ6GQQ9 843 aa11.73□□□□□ -0.53
SH3D19-209ENST00000514013 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.73□□□□□ -0.53
SH3D19-209ENST00000514013 UBE2Q1Q7Z7E8 422 aa11.73□□□□□ -0.53
SH3D19-209ENST00000514013 ANKRD13AQ8IZ07 590 aa11.73□□□□□ -0.53
SH3D19-209ENST00000514013 LRCH3Q96II8 777 aa11.73□□□□□ -0.53
SH3D19-209ENST00000514013 PNNQ9H307 717 aaKnown RBP11.73□□□□□ -0.53
SH3D19-209ENST00000514013 VEZTQ9HBM0 779 aa11.73□□□□□ -0.53
SH3D19-209ENST00000514013 JAG2Q9Y219 1238 aa11.73□□□□□ -0.53
SH3D19-209ENST00000514013 PPP2R3BQ9Y5P8 575 aa11.73□□□□□ -0.53
SH3D19-209ENST00000514013 OTOFQ9HC10 1997 aa11.72□□□□□ -0.53
SH3D19-209ENST00000514013 CCL15-CCL14A0A0B4J2E2 113 aa11.72□□□□□ -0.53
SH3D19-209ENST00000514013 UNCXA6NJT0 531 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms