RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 MYL10Q9BUA6 226 aa8.81□□□□□ -1
CLCN3-209ENST00000513761 UBA5Q9GZZ9 404 aa8.81□□□□□ -1
CLCN3-209ENST00000513761 TCP11L1Q9NUJ3 509 aa8.81□□□□□ -1
CLCN3-209ENST00000513761 MAPK8IP1Q9UQF2 711 aa8.81□□□□□ -1
CLCN3-209ENST00000513761 SLC4A4Q9Y6R1 1079 aa8.81□□□□□ -1
CLCN3-209ENST00000513761 KRT86O43790 486 aa8.81□□□□□ -1
CLCN3-209ENST00000513761 CNGA4Q8IV77 575 aa8.81□□□□□ -1
CLCN3-209ENST00000513761 MACROD2A1Z1Q3 448 aa8.81□□□□□ -1
CLCN3-209ENST00000513761 NDUFA8P51970 172 aa8.81□□□□□ -1
CLCN3-209ENST00000513761 MAP2K1Q02750 393 aaPredicted RBP8.81□□□□□ -1
CLCN3-209ENST00000513761 CCDC122Q5T0U0 273 aa8.81□□□□□ -1
CLCN3-209ENST00000513761 IL17REQ8NFR9 667 aa8.81□□□□□ -1
CLCN3-209ENST00000513761 NAPGQ99747 312 aaPredicted RBP8.81□□□□□ -1
CLCN3-209ENST00000513761 KRT23Q9C075 422 aa8.81□□□□□ -1
CLCN3-209ENST00000513761 RMND1Q9NWS8 449 aa8.81□□□□□ -1
CLCN3-209ENST00000513761 KIF5AQ12840 1032 aa8.81□□□□□ -1
CLCN3-209ENST00000513761 PRPF4BQ13523 1007 aaKnown RBP8.81□□□□□ -1
CLCN3-209ENST00000513761 CCDC40Q4G0X9 1142 aa8.81□□□□□ -1
CLCN3-209ENST00000513761 ADALQ6DHV7 355 aa8.81□□□□□ -1
CLCN3-209ENST00000513761 PPP1R13BQ96KQ4 1090 aa8.81□□□□□ -1
CLCN3-209ENST00000513761 PLIN2Q99541 437 aa8.81□□□□□ -1
CLCN3-209ENST00000513761 PCDHA7Q9UN72 937 aa8.81□□□□□ -1
CLCN3-209ENST00000513761 PFKFB1P16118 471 aa8.8□□□□□ -1
CLCN3-209ENST00000513761 PPARDQ03181 441 aa8.8□□□□□ -1
CLCN3-209ENST00000513761 KBTBD3Q8NAB2 608 aa8.8□□□□□ -1
CLCN3-209ENST00000513761 FAM76AQ8TAV0 307 aa8.8□□□□□ -1
CLCN3-209ENST00000513761 ZNF594Q96JF6 807 aaPredicted RBP8.8□□□□□ -1
CLCN3-209ENST00000513761 VAT1LQ9HCJ6 419 aa8.8□□□□□ -1
CLCN3-209ENST00000513761 SEC63Q9UGP8 760 aaKnown RBP8.8□□□□□ -1
CLCN3-209ENST00000513761 A0A1B0GUL7 405 aa8.8□□□□□ -1
CLCN3-209ENST00000513761 E7EWF7 191 aa8.8□□□□□ -1
CLCN3-209ENST00000513761 CTNND2Q9UQB3 1225 aa8.8□□□□□ -1
CLCN3-209ENST00000513761 HELBQ8NG08 1087 aaPredicted RBP8.8□□□□□ -1
CLCN3-209ENST00000513761 AFAP1L1Q8TED9 768 aa8.8□□□□□ -1
CLCN3-209ENST00000513761 EXOC1Q9NV70 894 aa8.8□□□□□ -1
CLCN3-209ENST00000513761 LUC7L2Q9Y383 392 aaKnown RBP8.8□□□□□ -1
CLCN3-209ENST00000513761 PTCH1Q13635 1447 aa8.8□□□□□ -1
CLCN3-209ENST00000513761 TSPY2A6NKD2 308 aa8.8□□□□□ -1
CLCN3-209ENST00000513761 TACC1O75410 805 aa8.8□□□□□ -1
CLCN3-209ENST00000513761 EIF4A1P60842 406 aaKnown RBP8.8□□□□□ -1
CLCN3-209ENST00000513761 SCRN1Q12765 414 aa8.8□□□□□ -1
CLCN3-209ENST00000513761 CAVIN4Q5BKX8 364 aa8.8□□□□□ -1
CLCN3-209ENST00000513761 IFIT1BQ5T764 474 aaKnown RBP8.8□□□□□ -1
CLCN3-209ENST00000513761 MMRN2Q9H8L6 949 aa8.8□□□□□ -1
CLCN3-209ENST00000513761 VWA3AA6NCI4 1184 aa8.8□□□□□ -1
CLCN3-209ENST00000513761 PSMA7O14818 248 aa8.8□□□□□ -1
CLCN3-209ENST00000513761 FGFR1OPO95684 399 aaKnown RBP8.8□□□□□ -1
CLCN3-209ENST00000513761 KRT83P78385 493 aa8.8□□□□□ -1
CLCN3-209ENST00000513761 MYSM1Q5VVJ2 828 aa8.8□□□□□ -1
CLCN3-209ENST00000513761 FBXO38Q6PIJ6 1188 aa8.8□□□□□ -1
CLCN3-209ENST00000513761 FAM114A1Q8IWE2 563 aa8.8□□□□□ -1
CLCN3-209ENST00000513761 OTUD6BQ8N6M0 293 aa8.8□□□□□ -1
CLCN3-209ENST00000513761 CCDC42Q96M95 316 aa8.8□□□□□ -1
CLCN3-209ENST00000513761 OPA1O60313 960 aa8.79□□□□□ -1
CLCN3-209ENST00000513761 CYP2E1P05181 493 aaPredicted RBP8.79□□□□□ -1
CLCN3-209ENST00000513761 MCM7P33993 719 aa8.79□□□□□ -1
CLCN3-209ENST00000513761 IFT81Q8WYA0 676 aa8.79□□□□□ -1
CLCN3-209ENST00000513761 MAP4K1Q92918 833 aa8.79□□□□□ -1
CLCN3-209ENST00000513761 TLR7Q9NYK1 1049 aaKnown RBP8.79□□□□□ -1
CLCN3-209ENST00000513761 DPCR1Q3MIW9 517 aa8.79□□□□□ -1
CLCN3-209ENST00000513761 GPR161Q8N6U8 529 aaKnown RBP8.79□□□□□ -1
CLCN3-209ENST00000513761 MIGA1Q8NAN2 632 aa8.79□□□□□ -1
CLCN3-209ENST00000513761 SBNO1A3KN83 1393 aa8.79□□□□□ -1
CLCN3-209ENST00000513761 ARID5AQ03989 594 aa8.79□□□□□ -1
CLCN3-209ENST00000513761 ZNF174Q15697 407 aa8.79□□□□□ -1
CLCN3-209ENST00000513761 SEPT7Q16181 437 aaKnown RBP8.79□□□□□ -1
CLCN3-209ENST00000513761 KRT40Q6A162 431 aa8.79□□□□□ -1
CLCN3-209ENST00000513761 KRT28Q7Z3Y7 464 aa8.79□□□□□ -1
CLCN3-209ENST00000513761 GPIHBP1Q8IV16 184 aa8.79□□□□□ -1
CLCN3-209ENST00000513761 CNNM2Q9H8M5 875 aa8.79□□□□□ -1
CLCN3-209ENST00000513761 PPP2R2CQ9Y2T4 447 aa8.79□□□□□ -1
CLCN3-209ENST00000513761 CTDP1Q9Y5B0 961 aaPredicted RBP8.79□□□□□ -1
CLCN3-209ENST00000513761 ZNF827Q17R98 1081 aa8.79□□□□□ -1
CLCN3-209ENST00000513761 BEND3Q5T5X7 828 aa8.79□□□□□ -1
CLCN3-209ENST00000513761 SPTY2D1Q68D10 685 aaPredicted RBP8.79□□□□□ -1
CLCN3-209ENST00000513761 ZNF589Q86UQ0 364 aaPredicted RBP8.79□□□□□ -1
CLCN3-209ENST00000513761 STAMQ92783 540 aa8.79□□□□□ -1
CLCN3-209ENST00000513761 PYM1Q9BRP8 204 aaKnown RBP8.79□□□□□ -1
CLCN3-209ENST00000513761 CLIC4Q9Y696 253 aa8.79□□□□□ -1
CLCN3-209ENST00000513761 UHRF1BP1LA0JNW5 1464 aa8.79□□□□□ -1
CLCN3-209ENST00000513761 SPECC1LQ69YQ0 1117 aa8.79□□□□□ -1
CLCN3-209ENST00000513761 CEP57Q86XR8 500 aa8.79□□□□□ -1
CLCN3-209ENST00000513761 CALML4Q96GE6 196 aa8.79□□□□□ -1
CLCN3-209ENST00000513761 FANCLQ9NW38 375 aa8.79□□□□□ -1
CLCN3-209ENST00000513761 TRPM2O94759 1503 aa8.78□□□□□ -1
CLCN3-209ENST00000513761 CYP7A1P22680 504 aa8.78□□□□□ -1
CLCN3-209ENST00000513761 TCERG1LQ5VWI1 586 aa8.78□□□□□ -1
CLCN3-209ENST00000513761 ESR2Q92731 530 aa8.78□□□□□ -1
CLCN3-209ENST00000513761 SPTLC3Q9NUV7 552 aa8.78□□□□□ -1
CLCN3-209ENST00000513761 POGZQ7Z3K3 1410 aa8.78□□□□□ -1
CLCN3-209ENST00000513761 BMP15O95972 392 aa8.78□□□□□ -1
CLCN3-209ENST00000513761 TUBB4BP68371 445 aa8.78□□□□□ -1
CLCN3-209ENST00000513761 DIS3L2Q8IYB7 885 aaKnown RBP8.78□□□□□ -1
CLCN3-209ENST00000513761 TMEM87AQ8NBN3 555 aa8.78□□□□□ -1
CLCN3-209ENST00000513761 SLF1Q9BQI6 1058 aa8.78□□□□□ -1
CLCN3-209ENST00000513761 ANGEL1Q9UNK9 670 aaKnown RBP8.78□□□□□ -1
CLCN3-209ENST00000513761 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.78□□□□□ -1
CLCN3-209ENST00000513761 ASIC1P78348 528 aa8.78□□□□□ -1
CLCN3-209ENST00000513761 AMPD3Q01432 767 aa8.78□□□□□ -1
CLCN3-209ENST00000513761 POSTNQ15063 836 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms