RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 BCAMP50895 628 aa9.09□□□□□ -0.95
HTT-212ENST00000513639 CHAF1AQ13111 956 aaPredicted RBP9.09□□□□□ -0.95
HTT-212ENST00000513639 PRKG1Q13976 671 aa9.09□□□□□ -0.95
HTT-212ENST00000513639 RASA3Q14644 834 aa9.09□□□□□ -0.95
HTT-212ENST00000513639 MAP3K11Q16584 847 aa9.09□□□□□ -0.95
HTT-212ENST00000513639 INTS3Q68E01 1043 aaKnown RBP9.09□□□□□ -0.95
HTT-212ENST00000513639 MOB2Q70IA6 237 aa9.09□□□□□ -0.95
HTT-212ENST00000513639 DZIP1LQ8IYY4 767 aaKnown RBP9.09□□□□□ -0.95
HTT-212ENST00000513639 VGLL2Q8N8G2 317 aa9.09□□□□□ -0.95
HTT-212ENST00000513639 KLHDC4Q8TBB5 520 aa9.09□□□□□ -0.95
HTT-212ENST00000513639 WDR66Q8TBY9 1149 aa9.09□□□□□ -0.95
HTT-212ENST00000513639 TEKT1Q969V4 418 aa9.09□□□□□ -0.95
HTT-212ENST00000513639 HOOK2Q96ED9 719 aa9.09□□□□□ -0.95
HTT-212ENST00000513639 MAST3O60307 1309 aa9.08□□□□□ -0.96
HTT-212ENST00000513639 CLRN2A0PK11 232 aa9.08□□□□□ -0.96
HTT-212ENST00000513639 FGFR2P21802 821 aa9.08□□□□□ -0.96
HTT-212ENST00000513639 CRKP46108 304 aa9.08□□□□□ -0.96
HTT-212ENST00000513639 RFX5P48382 616 aaPredicted RBP9.08□□□□□ -0.96
HTT-212ENST00000513639 CACNB1Q02641 598 aaPredicted RBP9.08□□□□□ -0.96
HTT-212ENST00000513639 SPDYE2Q495Y8 402 aa9.08□□□□□ -0.96
HTT-212ENST00000513639 DIEXFQ68CQ4 756 aaKnown RBP9.08□□□□□ -0.96
HTT-212ENST00000513639 OTUD7BQ6GQQ9 843 aa9.08□□□□□ -0.96
HTT-212ENST00000513639 ZNF70Q9UC06 446 aaPredicted RBP9.08□□□□□ -0.96
HTT-212ENST00000513639 MANSC4A6NHS7 340 aaPredicted RBP9.07□□□□□ -0.96
HTT-212ENST00000513639 CCDC85CA6NKD9 419 aa9.07□□□□□ -0.96
HTT-212ENST00000513639 SEMA3EO15041 775 aa9.07□□□□□ -0.96
HTT-212ENST00000513639 ZBTB48P10074 688 aaPredicted RBP9.07□□□□□ -0.96
HTT-212ENST00000513639 DGKZQ13574 1117 aa9.07□□□□□ -0.96
HTT-212ENST00000513639 PKN2Q16513 984 aaKnown RBP9.07□□□□□ -0.96
HTT-212ENST00000513639 NOM1Q5C9Z4 860 aaKnown RBP9.07□□□□□ -0.96
HTT-212ENST00000513639 NBPF12Q5TAG4 269 aaPredicted RBP9.07□□□□□ -0.96
HTT-212ENST00000513639 FKBP1CQ5VVH2 108 aa9.07□□□□□ -0.96
HTT-212ENST00000513639 SPRYD7Q5W111 196 aa9.07□□□□□ -0.96
HTT-212ENST00000513639 HHIPL2Q6UWX4 724 aa9.07□□□□□ -0.96
HTT-212ENST00000513639 ATG9AQ7Z3C6 839 aa9.07□□□□□ -0.96
HTT-212ENST00000513639 ANKRD13AQ8IZ07 590 aa9.07□□□□□ -0.96
HTT-212ENST00000513639 ZDHHC15Q96MV8 337 aa9.07□□□□□ -0.96
HTT-212ENST00000513639 TDRD3Q9H7E2 651 aaKnown RBP9.07□□□□□ -0.96
HTT-212ENST00000513639 COPRSQ9NQ92 184 aa9.07□□□□□ -0.96
HTT-212ENST00000513639 TMOD2Q9NZR1 351 aa9.07□□□□□ -0.96
HTT-212ENST00000513639 IQSEC3Q9UPP2 1182 aaPredicted RBP9.07□□□□□ -0.96
HTT-212ENST00000513639 AKAP2Q9Y2D5 859 aa9.07□□□□□ -0.96
HTT-212ENST00000513639 LRRFIP2Q9Y608 721 aaKnown RBP9.07□□□□□ -0.96
HTT-212ENST00000513639 COL1A1P02452 1464 aaPredicted RBP9.07□□□□□ -0.96
HTT-212ENST00000513639 USP2O75604 605 aaPredicted RBP9.06□□□□□ -0.96
HTT-212ENST00000513639 GNAI2P04899 355 aa9.06□□□□□ -0.96
HTT-212ENST00000513639 ATP2B3Q16720 1220 aa9.06□□□□□ -0.96
HTT-212ENST00000513639 ATF7IPQ6VMQ6 1270 aa9.06□□□□□ -0.96
HTT-212ENST00000513639 ZGPATQ8N5A5 531 aaKnown RBP9.06□□□□□ -0.96
HTT-212ENST00000513639 FRAT1Q92837 279 aaPredicted RBP9.06□□□□□ -0.96
HTT-212ENST00000513639 MCOLN1Q9GZU1 580 aa9.06□□□□□ -0.96
HTT-212ENST00000513639 SIL1Q9H173 461 aa9.06□□□□□ -0.96
HTT-212ENST00000513639 DENND2AQ9ULE3 1009 aa9.06□□□□□ -0.96
HTT-212ENST00000513639 PCDHAC2Q9Y5I4 1007 aa9.06□□□□□ -0.96
HTT-212ENST00000513639 TCP10L2B9ZVM9 353 aa9.05□□□□□ -0.96
HTT-212ENST00000513639 SRGAP3O43295 1099 aa9.05□□□□□ -0.96
HTT-212ENST00000513639 MAP3K9P80192 1104 aa9.05□□□□□ -0.96
HTT-212ENST00000513639 HNRNPUQ00839 825 aaKnown RBP eCLIP9.05□□□□□ -0.96
HTT-212ENST00000513639 ZKSCAN2Q63HK3 967 aa9.05□□□□□ -0.96
HTT-212ENST00000513639 CTU1Q7Z7A3 348 aaKnown RBP9.05□□□□□ -0.96
HTT-212ENST00000513639 FAM83AQ86UY5 434 aa9.05□□□□□ -0.96
HTT-212ENST00000513639 SLF2Q8IX21 1173 aa9.05□□□□□ -0.96
HTT-212ENST00000513639 MIER1Q8N108 512 aa9.05□□□□□ -0.96
HTT-212ENST00000513639 MEIS3Q99687 375 aa9.05□□□□□ -0.96
HTT-212ENST00000513639 CFHR5Q9BXR6 569 aa9.05□□□□□ -0.96
HTT-212ENST00000513639 PSME4Q14997 1843 aa9.05□□□□□ -0.96
HTT-212ENST00000513639 WDHD1O75717 1129 aaPredicted RBP9.04□□□□□ -0.96
HTT-212ENST00000513639 BCAR3O75815 825 aa9.04□□□□□ -0.96
HTT-212ENST00000513639 TBC1D8O95759 1140 aa9.04□□□□□ -0.96
HTT-212ENST00000513639 LDHBP07195 334 aaKnown RBP9.04□□□□□ -0.96
HTT-212ENST00000513639 TIMM10P62072 90 aa9.04□□□□□ -0.96
HTT-212ENST00000513639 MKRN3Q13064 507 aaKnown RBP9.04□□□□□ -0.96
HTT-212ENST00000513639 G3BP1Q13283 466 aaKnown RBP eCLIP9.04□□□□□ -0.96
HTT-212ENST00000513639 MTX1Q13505 466 aa9.04□□□□□ -0.96
HTT-212ENST00000513639 SPTY2D1Q68D10 685 aaPredicted RBP9.04□□□□□ -0.96
HTT-212ENST00000513639 APOBEC3HQ6NTF7 200 aaKnown RBP9.04□□□□□ -0.96
HTT-212ENST00000513639 TEPSINQ96N21 525 aa9.04□□□□□ -0.96
HTT-212ENST00000513639 CSADQ9Y600 493 aa9.04□□□□□ -0.96
HTT-212ENST00000513639 PAPPA2Q9BXP8 1791 aa9.04□□□□□ -0.96
HTT-212ENST00000513639 THSD7BQ9C0I4 1608 aa9.03□□□□□ -0.96
HTT-212ENST00000513639 GPR25O00155 361 aa9.03□□□□□ -0.96
HTT-212ENST00000513639 FKTNO75072 461 aa9.03□□□□□ -0.96
HTT-212ENST00000513639 TRIM27P14373 513 aa9.03□□□□□ -0.96
HTT-212ENST00000513639 RGS19P49795 217 aa9.03□□□□□ -0.96
HTT-212ENST00000513639 MVPQ14764 893 aaKnown RBP9.03□□□□□ -0.96
HTT-212ENST00000513639 GRIK5Q16478 980 aa9.03□□□□□ -0.96
HTT-212ENST00000513639 GORABQ5T7V8 394 aa9.03□□□□□ -0.96
HTT-212ENST00000513639 DCAF15Q66K64 600 aa9.03□□□□□ -0.96
HTT-212ENST00000513639 IFNL1Q8IU54 200 aa9.03□□□□□ -0.96
HTT-212ENST00000513639 ZNF296Q8WUU4 475 aaPredicted RBP9.03□□□□□ -0.96
HTT-212ENST00000513639 WNK4Q96J92 1243 aa9.03□□□□□ -0.96
HTT-212ENST00000513639 CLMNQ96JQ2 1002 aa9.03□□□□□ -0.96
HTT-212ENST00000513639 TMEM39BQ9GZU3 492 aa9.03□□□□□ -0.96
HTT-212ENST00000513639 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.03□□□□□ -0.96
HTT-212ENST00000513639 PA2G4Q9UQ80 394 aaKnown RBP9.03□□□□□ -0.96
HTT-212ENST00000513639 SPEF2Q9C093 1822 aa9.03□□□□□ -0.96
HTT-212ENST00000513639 SALL1Q9NSC2 1324 aa9.03□□□□□ -0.96
HTT-212ENST00000513639 TESPA1A2RU30 521 aaPredicted RBP9.02□□□□□ -0.97
HTT-212ENST00000513639 DSG3P32926 999 aa9.02□□□□□ -0.97
HTT-212ENST00000513639 GTF2A2P52657 109 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms