RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 UVSSAQ2YD98 709 aa10.69□□□□□ -0.7
TRAPPC11-210ENST00000513600 FRMD6Q96NE9 622 aa10.69□□□□□ -0.7
TRAPPC11-210ENST00000513600 NRSN2Q9GZP1 204 aa10.69□□□□□ -0.7
TRAPPC11-210ENST00000513600 CCDC27Q2M243 656 aa10.68□□□□□ -0.7
TRAPPC11-210ENST00000513600 EXOSC6Q5RKV6 272 aaKnown RBP10.68□□□□□ -0.7
TRAPPC11-210ENST00000513600 HP1BP3Q5SSJ5 553 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC11-210ENST00000513600 NUTM2GQ5VZR2 741 aa10.68□□□□□ -0.7
TRAPPC11-210ENST00000513600 FDX2Q6P4F2 183 aa10.68□□□□□ -0.7
TRAPPC11-210ENST00000513600 DNAJC14Q6Y2X3 702 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC11-210ENST00000513600 FAM46AQ96IP4 442 aaKnown RBP10.68□□□□□ -0.7
TRAPPC11-210ENST00000513600 TMPRSS13Q9BYE2 586 aa10.68□□□□□ -0.7
TRAPPC11-210ENST00000513600 SART1O43290 800 aaKnown RBP10.67□□□□□ -0.7
TRAPPC11-210ENST00000513600 MAOBP27338 520 aa10.67□□□□□ -0.7
TRAPPC11-210ENST00000513600 GSTT1P30711 240 aa10.67□□□□□ -0.7
TRAPPC11-210ENST00000513600 FAAP100Q0VG06 881 aa10.67□□□□□ -0.7
TRAPPC11-210ENST00000513600 AP3B2Q13367 1082 aa10.67□□□□□ -0.7
TRAPPC11-210ENST00000513600 POU4F3Q15319 338 aa10.67□□□□□ -0.7
TRAPPC11-210ENST00000513600 EAPPQ56P03 285 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC11-210ENST00000513600 PRR23CQ6ZRP0 262 aa10.67□□□□□ -0.7
TRAPPC11-210ENST00000513600 CYP4F12Q9HCS2 524 aa10.67□□□□□ -0.7
TRAPPC11-210ENST00000513600 PRPF40AO75400 957 aaKnown RBP10.66□□□□□ -0.7
TRAPPC11-210ENST00000513600 SMG8Q8ND04 991 aaKnown RBP10.66□□□□□ -0.7
TRAPPC11-210ENST00000513600 CORO1BQ9BR76 489 aa10.66□□□□□ -0.7
TRAPPC11-210ENST00000513600 TRIM56Q9BRZ2 755 aaKnown RBP10.66□□□□□ -0.7
TRAPPC11-210ENST00000513600 OSBPL7Q9BZF2 842 aa10.66□□□□□ -0.7
TRAPPC11-210ENST00000513600 SUGCTQ9HAC7 445 aa10.66□□□□□ -0.7
TRAPPC11-210ENST00000513600 AKAP2Q9Y2D5 859 aa10.66□□□□□ -0.7
TRAPPC11-210ENST00000513600 DHX15O43143 795 aaKnown RBP10.65□□□□□ -0.7
TRAPPC11-210ENST00000513600 DLGAP3O95886 979 aa10.65□□□□□ -0.7
TRAPPC11-210ENST00000513600 PPP2R3AQ06190 1150 aa10.65□□□□□ -0.7
TRAPPC11-210ENST00000513600 UTP4Q969X6 686 aaKnown RBP10.65□□□□□ -0.7
TRAPPC11-210ENST00000513600 ZBTB7CA1YPR0 619 aa10.64□□□□□ -0.71
TRAPPC11-210ENST00000513600 ERCC3P19447 782 aa10.64□□□□□ -0.71
TRAPPC11-210ENST00000513600 NPAS4Q8IUM7 802 aa10.64□□□□□ -0.71
TRAPPC11-210ENST00000513600 ARMC10Q8N2F6 343 aa10.64□□□□□ -0.71
TRAPPC11-210ENST00000513600 C12orf49Q9H741 205 aa10.64□□□□□ -0.71
TRAPPC11-210ENST00000513600 TMEM39AQ9NV64 488 aa10.64□□□□□ -0.71
TRAPPC11-210ENST00000513600 GPN3Q9UHW5 284 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC11-210ENST00000513600 ZNF157P51786 506 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC11-210ENST00000513600 C12orf50Q8NA57 414 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC11-210ENST00000513600 C3orf58Q8NDZ4 430 aa10.63□□□□□ -0.71
TRAPPC11-210ENST00000513600 MYRFLQ96LU7 910 aa10.63□□□□□ -0.71
TRAPPC11-210ENST00000513600 GNA15P30679 374 aa10.62□□□□□ -0.71
TRAPPC11-210ENST00000513600 PREPP48147 710 aa10.62□□□□□ -0.71
TRAPPC11-210ENST00000513600 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC11-210ENST00000513600 FAM8A1Q9UBU6 413 aa10.62□□□□□ -0.71
TRAPPC11-210ENST00000513600 PPM1HQ9ULR3 514 aa10.62□□□□□ -0.71
TRAPPC11-210ENST00000513600 HIF3AQ9Y2N7 669 aa10.62□□□□□ -0.71
TRAPPC11-210ENST00000513600 RAXQ9Y2V3 346 aa10.62□□□□□ -0.71
TRAPPC11-210ENST00000513600 TIAF1O95411 115 aa10.61□□□□□ -0.71
TRAPPC11-210ENST00000513600 ITGB7P26010 798 aa10.61□□□□□ -0.71
TRAPPC11-210ENST00000513600 PRSS36Q5K4E3 855 aa10.61□□□□□ -0.71
TRAPPC11-210ENST00000513600 GAS2O43903 313 aaKnown RBP10.6□□□□□ -0.71
TRAPPC11-210ENST00000513600 CTSBP07858 339 aa10.6□□□□□ -0.71
TRAPPC11-210ENST00000513600 SLC51AQ86UW1 340 aa10.6□□□□□ -0.71
TRAPPC11-210ENST00000513600 ANKRD24Q8TF21 1146 aa10.6□□□□□ -0.71
TRAPPC11-210ENST00000513600 CEP44Q9C0F1 390 aa10.6□□□□□ -0.71
TRAPPC11-210ENST00000513600 RAD18Q9NS91 495 aa10.6□□□□□ -0.71
TRAPPC11-210ENST00000513600 STOML1Q9UBI4 398 aa10.6□□□□□ -0.71
TRAPPC11-210ENST00000513600 ECEL1O95672 775 aa10.59□□□□□ -0.71
TRAPPC11-210ENST00000513600 BMP3P12645 472 aa10.59□□□□□ -0.71
TRAPPC11-210ENST00000513600 EIF4BP23588 611 aaKnown RBP10.59□□□□□ -0.71
TRAPPC11-210ENST00000513600 HNRNPUQ00839 825 aaKnown RBP eCLIP10.59□□□□□ -0.71
TRAPPC11-210ENST00000513600 SOX4Q06945 474 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC11-210ENST00000513600 FAM20CQ8IXL6 584 aa10.59□□□□□ -0.71
TRAPPC11-210ENST00000513600 DUSP9Q99956 384 aaKnown RBP10.59□□□□□ -0.71
TRAPPC11-210ENST00000513600 USP17L7P0C7H9 530 aa10.58□□□□□ -0.72
TRAPPC11-210ENST00000513600 PDE3AQ14432 1141 aa10.58□□□□□ -0.72
TRAPPC11-210ENST00000513600 DRD2P14416 443 aa10.57□□□□□ -0.72
TRAPPC11-210ENST00000513600 TPTE2Q6XPS3 522 aa10.57□□□□□ -0.72
TRAPPC11-210ENST00000513600 CLEC10AQ8IUN9 316 aa10.57□□□□□ -0.72
TRAPPC11-210ENST00000513600 NECAB3Q96P71 396 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC11-210ENST00000513600 AK5Q9Y6K8 562 aa10.57□□□□□ -0.72
TRAPPC11-210ENST00000513600 SYNGAP1Q96PV0 1343 aa10.57□□□□□ -0.72
TRAPPC11-210ENST00000513600 GSC2O15499 205 aa10.56□□□□□ -0.72
TRAPPC11-210ENST00000513600 GSTP1P09211 210 aaKnown RBP10.56□□□□□ -0.72
TRAPPC11-210ENST00000513600 ADH5P11766 374 aa10.56□□□□□ -0.72
TRAPPC11-210ENST00000513600 FSTP19883 344 aa10.56□□□□□ -0.72
TRAPPC11-210ENST00000513600 NME2P22392 152 aa10.56□□□□□ -0.72
TRAPPC11-210ENST00000513600 SULF2Q8IWU5 870 aa10.56□□□□□ -0.72
TRAPPC11-210ENST00000513600 EMILIN2Q9BXX0 1053 aa10.56□□□□□ -0.72
TRAPPC11-210ENST00000513600 KCNF1Q9H3M0 494 aa10.56□□□□□ -0.72
TRAPPC11-210ENST00000513600 KRT82Q9NSB4 513 aa10.56□□□□□ -0.72
TRAPPC11-210ENST00000513600 SAMM50Q9Y512 469 aa10.56□□□□□ -0.72
TRAPPC11-210ENST00000513600 AOC2O75106 756 aa10.55□□□□□ -0.72
TRAPPC11-210ENST00000513600 ARNTP27540 789 aa10.55□□□□□ -0.72
TRAPPC11-210ENST00000513600 USP11P51784 963 aa10.55□□□□□ -0.72
TRAPPC11-210ENST00000513600 FBXO33Q7Z6M2 555 aa10.55□□□□□ -0.72
TRAPPC11-210ENST00000513600 C2CD4AQ8NCU7 369 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC11-210ENST00000513600 FAM83CQ9BQN1 747 aa10.55□□□□□ -0.72
TRAPPC11-210ENST00000513600 CCDC86Q9H6F5 360 aaKnown RBP10.55□□□□□ -0.72
TRAPPC11-210ENST00000513600 AKAP4Q5JQC9 854 aa10.54□□□□□ -0.72
TRAPPC11-210ENST00000513600 BEND4Q6ZU67 534 aa10.54□□□□□ -0.72
TRAPPC11-210ENST00000513600 PDZD3Q86UT5 571 aa10.54□□□□□ -0.72
TRAPPC11-210ENST00000513600 WDR18Q9BV38 432 aa10.54□□□□□ -0.72
TRAPPC11-210ENST00000513600 ZC3H12CQ9C0D7 883 aaKnown RBP10.54□□□□□ -0.72
TRAPPC11-210ENST00000513600 C7orf69Q9H7B7 122 aa10.54□□□□□ -0.72
TRAPPC11-210ENST00000513600 PARP2Q9UGN5 583 aa10.54□□□□□ -0.72
TRAPPC11-210ENST00000513600 MAP4P27816 1152 aaKnown RBP10.53□□□□□ -0.72
TRAPPC11-210ENST00000513600 DAB2P98082 770 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms