RNA–Protein interactions for RNA: ENST00000513228.1

SMN1-208, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2

Gene SMN1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-208ENST00000513228 FBXL6Q8N531 539 aa4.16□□□□□ -1.74
SMN1-208ENST00000513228 GIMAP7Q8NHV1 300 aa4.16□□□□□ -1.74
SMN1-208ENST00000513228 CCDC74AQ96AQ1 378 aa4.16□□□□□ -1.74
SMN1-208ENST00000513228 CITED4Q96RK1 184 aa4.16□□□□□ -1.74
SMN1-208ENST00000513228 SSBP4Q9BWG4 385 aaPredicted RBP4.16□□□□□ -1.74
SMN1-208ENST00000513228 CLEC4MQ9H2X3 399 aaPredicted RBP4.16□□□□□ -1.74
SMN1-208ENST00000513228 HMX2A2RU54 273 aa4.15□□□□□ -1.75
SMN1-208ENST00000513228 EIF4EBP3O60516 100 aaPredicted RBP4.15□□□□□ -1.75
SMN1-208ENST00000513228 MAOBP27338 520 aa4.15□□□□□ -1.75
SMN1-208ENST00000513228 MAPK8P45983 427 aa4.15□□□□□ -1.75
SMN1-208ENST00000513228 GRIA4P48058 902 aa4.15□□□□□ -1.75
SMN1-208ENST00000513228 PREPP48147 710 aa4.15□□□□□ -1.75
SMN1-208ENST00000513228 PLCB3Q01970 1234 aa4.15□□□□□ -1.75
SMN1-208ENST00000513228 POU4F3Q15319 338 aa4.15□□□□□ -1.75
SMN1-208ENST00000513228 UVSSAQ2YD98 709 aa4.15□□□□□ -1.75
SMN1-208ENST00000513228 HP1BP3Q5SSJ5 553 aaPredicted RBP4.15□□□□□ -1.75
SMN1-208ENST00000513228 DTHD1Q6ZMT9 781 aa4.15□□□□□ -1.75
SMN1-208ENST00000513228 DYMQ7RTS9 669 aa4.15□□□□□ -1.75
SMN1-208ENST00000513228 MYRFLQ96LU7 910 aa4.15□□□□□ -1.75
SMN1-208ENST00000513228 CSRNP1Q96S65 589 aa4.15□□□□□ -1.75
SMN1-208ENST00000513228 YIPF2Q9BWQ6 316 aa4.15□□□□□ -1.75
SMN1-208ENST00000513228 ZC3H12CQ9C0D7 883 aaKnown RBP4.15□□□□□ -1.75
SMN1-208ENST00000513228 BHLHE41Q9C0J9 482 aaPredicted RBP4.15□□□□□ -1.75
SMN1-208ENST00000513228 ZFYVE1Q9HBF4 777 aa4.15□□□□□ -1.75
SMN1-208ENST00000513228 ATG3Q9NT62 314 aa4.15□□□□□ -1.75
SMN1-208ENST00000513228 GPN3Q9UHW5 284 aaPredicted RBP4.15□□□□□ -1.75
SMN1-208ENST00000513228 DCTN4Q9UJW0 460 aa4.15□□□□□ -1.75
SMN1-208ENST00000513228 AP4E1Q9UPM8 1137 aa4.15□□□□□ -1.75
SMN1-208ENST00000513228 TRAK1Q9UPV9 953 aa4.15□□□□□ -1.75
SMN1-208ENST00000513228 IVNS1ABPQ9Y6Y0 642 aa4.15□□□□□ -1.75
SMN1-208ENST00000513228 PNMA6FA0A0J9YX94 578 aa4.14□□□□□ -1.75
SMN1-208ENST00000513228 KRTAP9-7A8MTY7 169 aa4.14□□□□□ -1.75
SMN1-208ENST00000513228 IGLV1-40P01703 118 aa4.14□□□□□ -1.75
SMN1-208ENST00000513228 DRD2P14416 443 aa4.14□□□□□ -1.75
SMN1-208ENST00000513228 RAB6AP20340 208 aa4.14□□□□□ -1.75
SMN1-208ENST00000513228 MAP4P27816 1152 aaKnown RBP4.14□□□□□ -1.75
SMN1-208ENST00000513228 GRIK1P39086 918 aa4.14□□□□□ -1.75
SMN1-208ENST00000513228 FCGRTP55899 365 aa4.14□□□□□ -1.75
SMN1-208ENST00000513228 HNRNPUQ00839 825 aaKnown RBP eCLIP4.14□□□□□ -1.75
SMN1-208ENST00000513228 EXOSC6Q5RKV6 272 aaKnown RBP4.14□□□□□ -1.75
SMN1-208ENST00000513228 AEBP1Q8IUX7 1158 aa4.14□□□□□ -1.75
SMN1-208ENST00000513228 CCNJLQ8IV13 435 aa4.14□□□□□ -1.75
SMN1-208ENST00000513228 ZSCAN29Q8IWY8 852 aaPredicted RBP4.14□□□□□ -1.75
SMN1-208ENST00000513228 FAM20CQ8IXL6 584 aa4.14□□□□□ -1.75
SMN1-208ENST00000513228 EPS8L3Q8TE67 593 aaKnown RBP4.14□□□□□ -1.75
SMN1-208ENST00000513228 DNAJC25Q9H1X3 360 aa4.14□□□□□ -1.75
SMN1-208ENST00000513228 C7orf69Q9H7B7 122 aa4.14□□□□□ -1.75
SMN1-208ENST00000513228 AKAP2Q9Y2D5 859 aa4.14□□□□□ -1.75
SMN1-208ENST00000513228 LOC100289279A0A1B0GTE1 492 aa4.13□□□□□ -1.75
SMN1-208ENST00000513228 WDR64B1ANS9 1081 aa4.13□□□□□ -1.75
SMN1-208ENST00000513228 GPR182O15218 404 aa4.13□□□□□ -1.75
SMN1-208ENST00000513228 ATP2B2Q01814 1243 aa4.13□□□□□ -1.75
SMN1-208ENST00000513228 NFIAQ12857 509 aa4.13□□□□□ -1.75
SMN1-208ENST00000513228 SGO2Q562F6 1265 aa4.13□□□□□ -1.75
SMN1-208ENST00000513228 PAOXQ6QHF9 649 aa4.13□□□□□ -1.75
SMN1-208ENST00000513228 TMC7Q7Z402 723 aa4.13□□□□□ -1.75
SMN1-208ENST00000513228 CLEC10AQ8IUN9 316 aa4.13□□□□□ -1.75
SMN1-208ENST00000513228 ARMC10Q8N2F6 343 aa4.13□□□□□ -1.75
SMN1-208ENST00000513228 FBLIM1Q8WUP2 373 aa4.13□□□□□ -1.75
SMN1-208ENST00000513228 FAM46AQ96IP4 442 aaKnown RBP4.13□□□□□ -1.75
SMN1-208ENST00000513228 MFSD14AQ96MC6 490 aa4.13□□□□□ -1.75
SMN1-208ENST00000513228 SOX17Q9H6I2 414 aaPredicted RBP4.13□□□□□ -1.75
SMN1-208ENST00000513228 LGR6Q9HBX8 967 aa4.13□□□□□ -1.75
SMN1-208ENST00000513228 TMEM238LA0A1B0GVL6 79 aa4.12□□□□□ -1.75
SMN1-208ENST00000513228 FAM95CA0A1B0GW59 222 aa4.12□□□□□ -1.75
SMN1-208ENST00000513228 PPP2R3AQ06190 1150 aa4.12□□□□□ -1.75
SMN1-208ENST00000513228 ZNF423Q2M1K9 1284 aa4.12□□□□□ -1.75
SMN1-208ENST00000513228 KIAA0319Q5VV43 1072 aa4.12□□□□□ -1.75
SMN1-208ENST00000513228 RNF43Q68DV7 783 aa4.12□□□□□ -1.75
SMN1-208ENST00000513228 Q6ZS46 218 aa4.12□□□□□ -1.75
SMN1-208ENST00000513228 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.12□□□□□ -1.75
SMN1-208ENST00000513228 KCNB2Q92953 911 aa4.12□□□□□ -1.75
SMN1-208ENST00000513228 FAM129BQ96TA1 746 aa4.12□□□□□ -1.75
SMN1-208ENST00000513228 TCF12Q99081 682 aa4.12□□□□□ -1.75
SMN1-208ENST00000513228 FAM83CQ9BQN1 747 aa4.12□□□□□ -1.75
SMN1-208ENST00000513228 DBNDD2Q9BQY9 259 aa4.12□□□□□ -1.75
SMN1-208ENST00000513228 OSBPL1AQ9BXW6 950 aa4.12□□□□□ -1.75
SMN1-208ENST00000513228 RBCK1Q9BYM8 510 aa4.12□□□□□ -1.75
SMN1-208ENST00000513228 PIDD1Q9HB75 910 aa4.12□□□□□ -1.75
SMN1-208ENST00000513228 CBX8Q9HC52 389 aa4.12□□□□□ -1.75
SMN1-208ENST00000513228 SSU72Q9NP77 194 aaKnown RBP4.12□□□□□ -1.75
SMN1-208ENST00000513228 PICK1Q9NRD5 415 aa4.12□□□□□ -1.75
SMN1-208ENST00000513228 RNF112Q9ULX5 631 aa4.12□□□□□ -1.75
SMN1-208ENST00000513228 MEGF11A6BM72 1044 aa4.11□□□□□ -1.75
SMN1-208ENST00000513228 RNGTTO60942 597 aaKnown RBP4.11□□□□□ -1.75
SMN1-208ENST00000513228 TGFB1P01137 390 aa4.11□□□□□ -1.75
SMN1-208ENST00000513228 PDIA4P13667 645 aaKnown RBP4.11□□□□□ -1.75
SMN1-208ENST00000513228 ASPAP45381 313 aa4.11□□□□□ -1.75
SMN1-208ENST00000513228 SOX4Q06945 474 aaPredicted RBP4.11□□□□□ -1.75
SMN1-208ENST00000513228 KCNA1Q09470 495 aa4.11□□□□□ -1.75
SMN1-208ENST00000513228 AP3B2Q13367 1082 aa4.11□□□□□ -1.75
SMN1-208ENST00000513228 GRM2Q14416 872 aa4.11□□□□□ -1.75
SMN1-208ENST00000513228 ECM1Q16610 540 aa4.11□□□□□ -1.75
SMN1-208ENST00000513228 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.11□□□□□ -1.75
SMN1-208ENST00000513228 PI16Q6UXB8 463 aa4.11□□□□□ -1.75
SMN1-208ENST00000513228 SLC51AQ86UW1 340 aa4.11□□□□□ -1.75
SMN1-208ENST00000513228 SHKBP1Q8TBC3 707 aa4.11□□□□□ -1.75
SMN1-208ENST00000513228 ACSBG1Q96GR2 724 aa4.11□□□□□ -1.75
SMN1-208ENST00000513228 TBC1D32Q96NH3 1257 aa4.11□□□□□ -1.75
SMN1-208ENST00000513228 TMPRSS13Q9BYE2 586 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms