RNA–Protein interactions for RNA: ENST00000512925.1

PFDN1-205, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 900 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-205ENST00000512925 MYCP01106 439 aaPredicted RBP13.32□□□□□ -0.28
PFDN1-205ENST00000512925 KCNJ4P48050 445 aa13.32□□□□□ -0.28
PFDN1-205ENST00000512925 GCKRQ14397 625 aa13.32□□□□□ -0.28
PFDN1-205ENST00000512925 TAF1CQ15572 869 aaPredicted RBP13.32□□□□□ -0.28
PFDN1-205ENST00000512925 SLC4A8Q2Y0W8 1093 aa13.32□□□□□ -0.28
PFDN1-205ENST00000512925 HELBQ8NG08 1087 aaPredicted RBP13.32□□□□□ -0.28
PFDN1-205ENST00000512925 SH3TC2Q8TF17 1288 aa13.32□□□□□ -0.28
PFDN1-205ENST00000512925 ARHGAP39Q9C0H5 1083 aa13.32□□□□□ -0.28
PFDN1-205ENST00000512925 ZFYVE28Q9HCC9 887 aa13.32□□□□□ -0.28
PFDN1-205ENST00000512925 MYH3P11055 1940 aa13.31□□□□□ -0.28
PFDN1-205ENST00000512925 CCL15-CCL14A0A0B4J2E2 113 aa13.31□□□□□ -0.28
PFDN1-205ENST00000512925 APAF1O14727 1248 aa13.31□□□□□ -0.28
PFDN1-205ENST00000512925 ARHGEF6Q15052 776 aa13.31□□□□□ -0.28
PFDN1-205ENST00000512925 CCL15Q16663 113 aa13.31□□□□□ -0.28
PFDN1-205ENST00000512925 CHMP4AQ9BY43 222 aa13.31□□□□□ -0.28
PFDN1-205ENST00000512925 RBM27Q9P2N5 1060 aaKnown RBP13.31□□□□□ -0.28
PFDN1-205ENST00000512925 ZNF70Q9UC06 446 aaPredicted RBP13.31□□□□□ -0.28
PFDN1-205ENST00000512925 GTF2A2P52657 109 aa13.3□□□□□ -0.28
PFDN1-205ENST00000512925 MAP3K9P80192 1104 aa13.3□□□□□ -0.28
PFDN1-205ENST00000512925 CALD1Q05682 793 aaKnown RBP13.3□□□□□ -0.28
PFDN1-205ENST00000512925 VGLL4Q14135 290 aa13.3□□□□□ -0.28
PFDN1-205ENST00000512925 SHISA4Q96DD7 197 aa13.3□□□□□ -0.28
PFDN1-205ENST00000512925 PRO3102Q9H379 93 aa13.3□□□□□ -0.28
PFDN1-205ENST00000512925 TDRD3Q9H7E2 651 aaKnown RBP13.3□□□□□ -0.28
PFDN1-205ENST00000512925 A0A0C4DFX4 3053 aa13.3□□□□□ -0.28
PFDN1-205ENST00000512925 ECM29Q5VYK3 1845 aa13.29□□□□□ -0.28
PFDN1-205ENST00000512925 ANKRD18BA2A2Z9 1011 aa13.29□□□□□ -0.28
PFDN1-205ENST00000512925 TLR2O60603 784 aa13.29□□□□□ -0.28
PFDN1-205ENST00000512925 RBM5P52756 815 aaKnown RBP eCLIP13.29□□□□□ -0.28
PFDN1-205ENST00000512925 LACTBP83111 547 aaPredicted RBP13.29□□□□□ -0.28
PFDN1-205ENST00000512925 ZNF804AQ7Z570 1209 aa13.29□□□□□ -0.28
PFDN1-205ENST00000512925 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.29□□□□□ -0.28
PFDN1-205ENST00000512925 FAM205AQ6ZU69 1335 aa13.29□□□□□ -0.28
PFDN1-205ENST00000512925 OTOFQ9HC10 1997 aa13.29□□□□□ -0.28
PFDN1-205ENST00000512925 CTGFP29279 349 aa13.28□□□□□ -0.28
PFDN1-205ENST00000512925 FOXO4P98177 505 aa13.28□□□□□ -0.28
PFDN1-205ENST00000512925 TNFAIP1Q13829 316 aa13.28□□□□□ -0.28
PFDN1-205ENST00000512925 MTFR1Q15390 333 aa13.28□□□□□ -0.28
PFDN1-205ENST00000512925 TMEM39BQ9GZU3 492 aa13.28□□□□□ -0.28
PFDN1-205ENST00000512925 SERPINA10Q9UK55 444 aa13.28□□□□□ -0.28
PFDN1-205ENST00000512925 COL6A3P12111 3177 aa13.28□□□□□ -0.28
PFDN1-205ENST00000512925 LAMA3Q16787 3333 aa13.28□□□□□ -0.28
PFDN1-205ENST00000512925 SPDYE5A6NIY4 337 aa13.27□□□□□ -0.29
PFDN1-205ENST00000512925 BTBD19C9JJ37 291 aa13.27□□□□□ -0.29
PFDN1-205ENST00000512925 UBE2Q1Q7Z7E8 422 aa13.27□□□□□ -0.29
PFDN1-205ENST00000512925 DZIP1LQ8IYY4 767 aaKnown RBP13.27□□□□□ -0.29
PFDN1-205ENST00000512925 TDRD7Q8NHU6 1098 aaKnown RBP13.27□□□□□ -0.29
PFDN1-205ENST00000512925 STK31Q9BXU1 1019 aa13.27□□□□□ -0.29
PFDN1-205ENST00000512925 TTF2Q9UNY4 1162 aaKnown RBP13.27□□□□□ -0.29
PFDN1-205ENST00000512925 ZSWIM8A7E2V4 1837 aa13.26□□□□□ -0.29
PFDN1-205ENST00000512925 TCP10L2B9ZVM9 353 aa13.26□□□□□ -0.29
PFDN1-205ENST00000512925 DLL1O00548 723 aa13.26□□□□□ -0.29
PFDN1-205ENST00000512925 GNRH1P01148 92 aa13.26□□□□□ -0.29
PFDN1-205ENST00000512925 PRMT2P55345 433 aa13.26□□□□□ -0.29
PFDN1-205ENST00000512925 IFIT5Q13325 482 aaKnown RBP13.26□□□□□ -0.29
PFDN1-205ENST00000512925 MFSD14BQ5SR56 506 aa13.26□□□□□ -0.29
PFDN1-205ENST00000512925 C17orf99Q6UX52 265 aa13.26□□□□□ -0.29
PFDN1-205ENST00000512925 LINS1Q8NG48 757 aa13.26□□□□□ -0.29
PFDN1-205ENST00000512925 DPF3Q92784 378 aa13.26□□□□□ -0.29
PFDN1-205ENST00000512925 TSR2Q969E8 191 aaKnown RBP13.26□□□□□ -0.29
PFDN1-205ENST00000512925 ZCCHC17Q9NP64 241 aaKnown RBP13.26□□□□□ -0.29
PFDN1-205ENST00000512925 SNCAIPQ9Y6H5 919 aa13.26□□□□□ -0.29
PFDN1-205ENST00000512925 IRF6O14896 467 aa13.25□□□□□ -0.29
PFDN1-205ENST00000512925 CETPP11597 493 aa13.25□□□□□ -0.29
PFDN1-205ENST00000512925 VASPP50552 380 aaPredicted RBP13.25□□□□□ -0.29
PFDN1-205ENST00000512925 FLIIQ13045 1269 aa13.25□□□□□ -0.29
PFDN1-205ENST00000512925 GRIK5Q16478 980 aa13.25□□□□□ -0.29
PFDN1-205ENST00000512925 EPHA10Q5JZY3 1008 aa13.25□□□□□ -0.29
PFDN1-205ENST00000512925 DNAAF4Q8WXU2 420 aa13.25□□□□□ -0.29
PFDN1-205ENST00000512925 ZNF594Q96JF6 807 aaPredicted RBP13.25□□□□□ -0.29
PFDN1-205ENST00000512925 MYH16Q9H6N6 1097 aa13.25□□□□□ -0.29
PFDN1-205ENST00000512925 CSADQ9Y600 493 aa13.25□□□□□ -0.29
PFDN1-205ENST00000512925 PLIN1O60240 522 aa13.24□□□□□ -0.29
PFDN1-205ENST00000512925 CRKP46108 304 aa13.24□□□□□ -0.29
PFDN1-205ENST00000512925 GJA8P48165 433 aa13.24□□□□□ -0.29
PFDN1-205ENST00000512925 KIF22Q14807 665 aa13.24□□□□□ -0.29
PFDN1-205ENST00000512925 TWISTNBQ3B726 338 aaPredicted RBP13.24□□□□□ -0.29
PFDN1-205ENST00000512925 ERO1BQ86YB8 467 aa13.24□□□□□ -0.29
PFDN1-205ENST00000512925 ZKSCAN4Q969J2 545 aaPredicted RBP13.24□□□□□ -0.29
PFDN1-205ENST00000512925 FAM84BQ96KN1 310 aaPredicted RBP13.24□□□□□ -0.29
PFDN1-205ENST00000512925 TRIM47Q96LD4 638 aa13.24□□□□□ -0.29
PFDN1-205ENST00000512925 SRRDQ9UH36 339 aa13.24□□□□□ -0.29
PFDN1-205ENST00000512925 A0A1B0GUL6 1792 aa13.23□□□□□ -0.29
PFDN1-205ENST00000512925 ECM2O94769 699 aaPredicted RBP13.23□□□□□ -0.29
PFDN1-205ENST00000512925 GYG1P46976 350 aa13.23□□□□□ -0.29
PFDN1-205ENST00000512925 TNNI2P48788 182 aa13.23□□□□□ -0.29
PFDN1-205ENST00000512925 DDX10Q13206 875 aaKnown RBP13.23□□□□□ -0.29
PFDN1-205ENST00000512925 LDHAL6AQ6ZMR3 332 aa13.23□□□□□ -0.29
PFDN1-205ENST00000512925 SLC17A8Q8NDX2 589 aa13.23□□□□□ -0.29
PFDN1-205ENST00000512925 WDHD1O75717 1129 aaPredicted RBP13.22□□□□□ -0.29
PFDN1-205ENST00000512925 GJB1P08034 283 aa13.22□□□□□ -0.29
PFDN1-205ENST00000512925 OSBPP22059 807 aa13.22□□□□□ -0.29
PFDN1-205ENST00000512925 HIBADHP31937 336 aaKnown RBP13.22□□□□□ -0.29
PFDN1-205ENST00000512925 PSMC4P43686 418 aa13.22□□□□□ -0.29
PFDN1-205ENST00000512925 CACNB3P54284 484 aa13.22□□□□□ -0.29
PFDN1-205ENST00000512925 PPIL2Q13356 520 aa13.22□□□□□ -0.29
PFDN1-205ENST00000512925 FKBP5Q13451 457 aaPredicted RBP13.22□□□□□ -0.29
PFDN1-205ENST00000512925 SNAPC2Q13487 334 aa13.22□□□□□ -0.29
PFDN1-205ENST00000512925 LMBR1LQ6UX01 489 aa13.22□□□□□ -0.29
PFDN1-205ENST00000512925 NKX2-3Q8TAU0 364 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms