RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 TMEM39BQ9GZU3 492 aa16.86■□□□□ 0.29
POLR2J3-216ENST00000511773 TTF2Q9UNY4 1162 aaKnown RBP16.86■□□□□ 0.29
POLR2J3-216ENST00000511773 CSADQ9Y600 493 aa16.86■□□□□ 0.29
POLR2J3-216ENST00000511773 TAF7LQ5H9L4 462 aa16.85■□□□□ 0.29
POLR2J3-216ENST00000511773 LINS1Q8NG48 757 aa16.85■□□□□ 0.29
POLR2J3-216ENST00000511773 DNAAF4Q8WXU2 420 aa16.85■□□□□ 0.29
POLR2J3-216ENST00000511773 ZNF594Q96JF6 807 aaPredicted RBP16.85■□□□□ 0.29
POLR2J3-216ENST00000511773 TEPSINQ96N21 525 aa16.85■□□□□ 0.29
POLR2J3-216ENST00000511773 RANBP2P49792 3224 aaKnown RBP16.85■□□□□ 0.29
POLR2J3-216ENST00000511773 MAP3K9P80192 1104 aa16.84■□□□□ 0.29
POLR2J3-216ENST00000511773 FOXO4P98177 505 aa16.84■□□□□ 0.29
POLR2J3-216ENST00000511773 KIF22Q14807 665 aa16.84■□□□□ 0.29
POLR2J3-216ENST00000511773 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.84■□□□□ 0.29
POLR2J3-216ENST00000511773 WDHD1O75717 1129 aaPredicted RBP16.83■□□□□ 0.28
POLR2J3-216ENST00000511773 DZIP1LQ8IYY4 767 aaKnown RBP16.83■□□□□ 0.28
POLR2J3-216ENST00000511773 DPF3Q92784 378 aa16.83■□□□□ 0.28
POLR2J3-216ENST00000511773 CNNM1Q9NRU3 951 aa16.83■□□□□ 0.28
POLR2J3-216ENST00000511773 SERPINA10Q9UK55 444 aa16.83■□□□□ 0.28
POLR2J3-216ENST00000511773 FAM205AQ6ZU69 1335 aa16.82■□□□□ 0.28
POLR2J3-216ENST00000511773 GYG1P46976 350 aa16.82■□□□□ 0.28
POLR2J3-216ENST00000511773 TNNI2P48788 182 aa16.82■□□□□ 0.28
POLR2J3-216ENST00000511773 CACNB3P54284 484 aa16.82■□□□□ 0.28
POLR2J3-216ENST00000511773 LACTBP83111 547 aaPredicted RBP16.82■□□□□ 0.28
POLR2J3-216ENST00000511773 LMBR1LQ6UX01 489 aa16.82■□□□□ 0.28
POLR2J3-216ENST00000511773 LDHAL6AQ6ZMR3 332 aa16.82■□□□□ 0.28
POLR2J3-216ENST00000511773 BTBD19C9JJ37 291 aa16.81■□□□□ 0.28
POLR2J3-216ENST00000511773 TLR2O60603 784 aa16.81■□□□□ 0.28
POLR2J3-216ENST00000511773 CETPP11597 493 aa16.81■□□□□ 0.28
POLR2J3-216ENST00000511773 CRKP46108 304 aa16.81■□□□□ 0.28
POLR2J3-216ENST00000511773 CCDC57Q2TAC2 916 aa16.81■□□□□ 0.28
POLR2J3-216ENST00000511773 RBM27Q9P2N5 1060 aaKnown RBP16.81■□□□□ 0.28
POLR2J3-216ENST00000511773 SNCAIPQ9Y6H5 919 aa16.81■□□□□ 0.28
POLR2J3-216ENST00000511773 SPDYE5A6NIY4 337 aa16.8■□□□□ 0.28
POLR2J3-216ENST00000511773 MTFR1Q15390 333 aa16.8■□□□□ 0.28
POLR2J3-216ENST00000511773 EPHA10Q5JZY3 1008 aa16.8■□□□□ 0.28
POLR2J3-216ENST00000511773 TDRD7Q8NHU6 1098 aaKnown RBP16.8■□□□□ 0.28
POLR2J3-216ENST00000511773 ZKSCAN4Q969J2 545 aaPredicted RBP16.8■□□□□ 0.28
POLR2J3-216ENST00000511773 SHISA4Q96DD7 197 aa16.8■□□□□ 0.28
POLR2J3-216ENST00000511773 WRNIP1Q96S55 665 aa16.8■□□□□ 0.28
POLR2J3-216ENST00000511773 IQSEC3Q9UPP2 1182 aaPredicted RBP16.8■□□□□ 0.28
POLR2J3-216ENST00000511773 F6X3S4 739 aa16.79■□□□□ 0.28
POLR2J3-216ENST00000511773 HIBADHP31937 336 aaKnown RBP16.79■□□□□ 0.28
POLR2J3-216ENST00000511773 CHAF1AQ13111 956 aaPredicted RBP16.79■□□□□ 0.28
POLR2J3-216ENST00000511773 GRIK5Q16478 980 aa16.79■□□□□ 0.28
POLR2J3-216ENST00000511773 PRKRIP1Q9H875 184 aaPredicted RBP16.79■□□□□ 0.28
POLR2J3-216ENST00000511773 IRF6O14896 467 aa16.78■□□□□ 0.28
POLR2J3-216ENST00000511773 SNAPC2Q13487 334 aa16.78■□□□□ 0.28
POLR2J3-216ENST00000511773 ERO1BQ86YB8 467 aa16.78■□□□□ 0.28
POLR2J3-216ENST00000511773 CPA4Q9UI42 421 aa16.78■□□□□ 0.28
POLR2J3-216ENST00000511773 CACNA1FO60840 1977 aa16.77■□□□□ 0.28
POLR2J3-216ENST00000511773 GNRH1P01148 92 aa16.77■□□□□ 0.28
POLR2J3-216ENST00000511773 FAM84BQ96KN1 310 aaPredicted RBP16.77■□□□□ 0.28
POLR2J3-216ENST00000511773 CTGFP29279 349 aa16.76■□□□□ 0.27
POLR2J3-216ENST00000511773 PSMC4P43686 418 aa16.76■□□□□ 0.27
POLR2J3-216ENST00000511773 PRMT2P55345 433 aa16.76■□□□□ 0.27
POLR2J3-216ENST00000511773 PPIL2Q13356 520 aa16.76■□□□□ 0.27
POLR2J3-216ENST00000511773 VPS37DQ86XT2 251 aa16.76■□□□□ 0.27
POLR2J3-216ENST00000511773 WWC1Q8IX03 1113 aa16.76■□□□□ 0.27
POLR2J3-216ENST00000511773 RAET1EQ8TD07 263 aa16.76■□□□□ 0.27
POLR2J3-216ENST00000511773 TRIM47Q96LD4 638 aa16.76■□□□□ 0.27
POLR2J3-216ENST00000511773 ZCCHC17Q9NP64 241 aaKnown RBP16.76■□□□□ 0.27
POLR2J3-216ENST00000511773 FRAT2O75474 233 aaPredicted RBP16.75■□□□□ 0.27
POLR2J3-216ENST00000511773 FMNL1O95466 1100 aaPredicted RBP16.75■□□□□ 0.27
POLR2J3-216ENST00000511773 UBE4AQ14139 1066 aa16.75■□□□□ 0.27
POLR2J3-216ENST00000511773 BEND3Q5T5X7 828 aa16.75■□□□□ 0.27
POLR2J3-216ENST00000511773 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.75■□□□□ 0.27
POLR2J3-216ENST00000511773 TEKT1Q969V4 418 aa16.75■□□□□ 0.27
POLR2J3-216ENST00000511773 PUS3Q9BZE2 481 aaKnown RBP16.75■□□□□ 0.27
POLR2J3-216ENST00000511773 TMOD2Q9NZR1 351 aa16.75■□□□□ 0.27
POLR2J3-216ENST00000511773 BIN2Q9UBW5 565 aaPredicted RBP16.75■□□□□ 0.27
POLR2J3-216ENST00000511773 SRRDQ9UH36 339 aa16.75■□□□□ 0.27
POLR2J3-216ENST00000511773 FANCIQ9NVI1 1328 aa16.74■□□□□ 0.27
POLR2J3-216ENST00000511773 GRM8O00222 908 aa16.74■□□□□ 0.27
POLR2J3-216ENST00000511773 CCL5P13501 91 aa16.74■□□□□ 0.27
POLR2J3-216ENST00000511773 OSBPP22059 807 aa16.74■□□□□ 0.27
POLR2J3-216ENST00000511773 GRK4P32298 578 aa16.74■□□□□ 0.27
POLR2J3-216ENST00000511773 C17orf99Q6UX52 265 aa16.74■□□□□ 0.27
POLR2J3-216ENST00000511773 NKX2-3Q8TAU0 364 aa16.74■□□□□ 0.27
POLR2J3-216ENST00000511773 RIPOR2Q9Y4F9 1068 aa16.74■□□□□ 0.27
POLR2J3-216ENST00000511773 CUL9Q8IWT3 2517 aa16.73■□□□□ 0.27
POLR2J3-216ENST00000511773 MYPNQ86TC9 1320 aa16.73■□□□□ 0.27
POLR2J3-216ENST00000511773 PDHXO00330 501 aa16.73■□□□□ 0.27
POLR2J3-216ENST00000511773 DLL1O00548 723 aa16.73■□□□□ 0.27
POLR2J3-216ENST00000511773 MIGA2Q7L4E1 593 aa16.73■□□□□ 0.27
POLR2J3-216ENST00000511773 SLC17A8Q8NDX2 589 aa16.73■□□□□ 0.27
POLR2J3-216ENST00000511773 HTATIP2Q9BUP3 242 aa16.73■□□□□ 0.27
POLR2J3-216ENST00000511773 RNF208Q9H0X6 261 aa16.73■□□□□ 0.27
POLR2J3-216ENST00000511773 C9orf78Q9NZ63 289 aaPredicted RBP16.73■□□□□ 0.27
POLR2J3-216ENST00000511773 HOXD10P28358 340 aa16.72■□□□□ 0.27
POLR2J3-216ENST00000511773 INPP5BP32019 993 aa16.72■□□□□ 0.27
POLR2J3-216ENST00000511773 GJA8P48165 433 aa16.72■□□□□ 0.27
POLR2J3-216ENST00000511773 CCDC27Q2M243 656 aa16.72■□□□□ 0.27
POLR2J3-216ENST00000511773 DCAF15Q66K64 600 aa16.72■□□□□ 0.27
POLR2J3-216ENST00000511773 HOOK2Q96ED9 719 aa16.72■□□□□ 0.27
POLR2J3-216ENST00000511773 VAMP4O75379 141 aa16.71■□□□□ 0.27
POLR2J3-216ENST00000511773 GJB1P08034 283 aa16.71■□□□□ 0.27
POLR2J3-216ENST00000511773 HDLBPQ00341 1268 aaKnown RBP16.71■□□□□ 0.27
POLR2J3-216ENST00000511773 PPATQ06203 517 aa16.71■□□□□ 0.27
POLR2J3-216ENST00000511773 ANKRD23Q86SG2 305 aa16.71■□□□□ 0.27
POLR2J3-216ENST00000511773 FAM83AQ86UY5 434 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms