RNA–Protein interactions for RNA: ENST00000511452.1

NFXL1-208, Transcript of nuclear transcription factor, X-box binding like 1, human

TSL 5

Gene NFXL1, Length 419 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFXL1-208	ENST00000511452	GRM2	Q14416	872 aa		6.3	□□□□□ -1.4
NFXL1-208	ENST00000511452	RNF43	Q68DV7	783 aa		6.3	□□□□□ -1.4
NFXL1-208	ENST00000511452	TMEM102	Q8N9M5	508 aa	Predicted RBP	6.3	□□□□□ -1.4
NFXL1-208	ENST00000511452	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	6.3	□□□□□ -1.4
NFXL1-208	ENST00000511452	NXPE3	Q969Y0	559 aa		6.3	□□□□□ -1.4
NFXL1-208	ENST00000511452	DUSP9	Q99956	384 aa	Known RBP	6.3	□□□□□ -1.4
NFXL1-208	ENST00000511452	LACRT	Q9GZZ8	138 aa		6.3	□□□□□ -1.4
NFXL1-208	ENST00000511452	C7orf69	Q9H7B7	122 aa		6.3	□□□□□ -1.4
NFXL1-208	ENST00000511452	CCDC9	Q9Y3X0	531 aa	Known RBP	6.3	□□□□□ -1.4
NFXL1-208	ENST00000511452	PDE2A	O00408	941 aa	Predicted RBP	6.29	□□□□□ -1.4
NFXL1-208	ENST00000511452	PRPF40A	O75400	957 aa	Known RBP	6.29	□□□□□ -1.4
NFXL1-208	ENST00000511452	GRIA4	P48058	902 aa		6.29	□□□□□ -1.4
NFXL1-208	ENST00000511452	GDF6	Q6KF10	455 aa	Predicted RBP	6.29	□□□□□ -1.4
NFXL1-208	ENST00000511452	CCNJL	Q8IV13	435 aa		6.29	□□□□□ -1.4
NFXL1-208	ENST00000511452	TRIM42	Q8IWZ5	723 aa		6.29	□□□□□ -1.4
NFXL1-208	ENST00000511452	GLIS3	Q8NEA6	775 aa		6.29	□□□□□ -1.4
NFXL1-208	ENST00000511452	UBL7	Q96S82	380 aa	Predicted RBP	6.29	□□□□□ -1.4
NFXL1-208	ENST00000511452	BCL2L13	Q9BXK5	485 aa		6.29	□□□□□ -1.4
NFXL1-208	ENST00000511452	BHLHE41	Q9C0J9	482 aa	Predicted RBP	6.29	□□□□□ -1.4
NFXL1-208	ENST00000511452	RBSN	Q9H1K0	784 aa		6.29	□□□□□ -1.4
NFXL1-208	ENST00000511452	HMX2	A2RU54	273 aa		6.28	□□□□□ -1.4
NFXL1-208	ENST00000511452	SMNDC1	O75940	238 aa	Known RBP eCLIP	6.28	□□□□□ -1.4
NFXL1-208	ENST00000511452	ATP2B2	Q01814	1243 aa		6.28	□□□□□ -1.4
NFXL1-208	ENST00000511452	ALG1L	Q6GMV1	187 aa		6.28	□□□□□ -1.4
NFXL1-208	ENST00000511452	FBF1	Q8TES7	1133 aa		6.28	□□□□□ -1.4
NFXL1-208	ENST00000511452	GIPC2	Q8TF65	315 aa		6.28	□□□□□ -1.4
NFXL1-208	ENST00000511452	FAM161B	Q96MY7	647 aa		6.28	□□□□□ -1.4
NFXL1-208	ENST00000511452	KRTAP9-3	Q9BYQ3	159 aa		6.28	□□□□□ -1.4
NFXL1-208	ENST00000511452	OSBPL7	Q9BZF2	842 aa		6.28	□□□□□ -1.4
NFXL1-208	ENST00000511452	EHD4	Q9H223	541 aa		6.28	□□□□□ -1.4
NFXL1-208	ENST00000511452	LIN7B	Q9HAP6	207 aa		6.28	□□□□□ -1.4
NFXL1-208	ENST00000511452	ABCB6	Q9NP58	842 aa		6.28	□□□□□ -1.4
NFXL1-208	ENST00000511452	SH2B1	Q9NRF2	756 aa	Predicted RBP	6.28	□□□□□ -1.4
NFXL1-208	ENST00000511452	GADD45B	O75293	160 aa	Predicted RBP	6.27	□□□□□ -1.41
NFXL1-208	ENST00000511452	ZNF16	P17020	682 aa	Predicted RBP	6.27	□□□□□ -1.41
NFXL1-208	ENST00000511452	EPHA1	P21709	976 aa		6.27	□□□□□ -1.41
NFXL1-208	ENST00000511452	SPRED3	Q2MJR0	410 aa		6.27	□□□□□ -1.41
NFXL1-208	ENST00000511452	PRPF40B	Q6NWY9	871 aa	Known RBP	6.27	□□□□□ -1.41
NFXL1-208	ENST00000511452	NXPE4	Q6UWF7	544 aa		6.27	□□□□□ -1.41
NFXL1-208	ENST00000511452	ARMC10	Q8N2F6	343 aa		6.27	□□□□□ -1.41
NFXL1-208	ENST00000511452	IL22RA1	Q8N6P7	574 aa		6.27	□□□□□ -1.41
NFXL1-208	ENST00000511452	SHKBP1	Q8TBC3	707 aa		6.27	□□□□□ -1.41
NFXL1-208	ENST00000511452	BCO2	Q9BYV7	579 aa		6.27	□□□□□ -1.41
NFXL1-208	ENST00000511452	MUC3B	Q9H195	1237 aa		6.27	□□□□□ -1.41
NFXL1-208	ENST00000511452	NLRP2	Q9NX02	1062 aa		6.27	□□□□□ -1.41
NFXL1-208	ENST00000511452	SOX13	Q9UN79	622 aa		6.27	□□□□□ -1.41
NFXL1-208	ENST00000511452	GNA15	P30679	374 aa		6.26	□□□□□ -1.41
NFXL1-208	ENST00000511452	PKN1	Q16512	942 aa		6.26	□□□□□ -1.41
NFXL1-208	ENST00000511452	TXNDC11	Q6PKC3	985 aa		6.26	□□□□□ -1.41
NFXL1-208	ENST00000511452	ASAP3	Q8TDY4	903 aa		6.26	□□□□□ -1.41
NFXL1-208	ENST00000511452	UTP4	Q969X6	686 aa	Known RBP	6.26	□□□□□ -1.41
NFXL1-208	ENST00000511452	ADAM19	Q9H013	955 aa		6.26	□□□□□ -1.41
NFXL1-208	ENST00000511452	PARP2	Q9UGN5	583 aa		6.26	□□□□□ -1.41
NFXL1-208	ENST00000511452		A0A096LPE4	126 aa		6.25	□□□□□ -1.41
NFXL1-208	ENST00000511452		A0A1W2PPZ6	126 aa		6.25	□□□□□ -1.41
NFXL1-208	ENST00000511452		B8ZZF3	427 aa		6.25	□□□□□ -1.41
NFXL1-208	ENST00000511452	PTPRA	P18433	802 aa		6.25	□□□□□ -1.41
NFXL1-208	ENST00000511452	CDC27	P30260	824 aa		6.25	□□□□□ -1.41
NFXL1-208	ENST00000511452	CDC25B	P30305	580 aa		6.25	□□□□□ -1.41
NFXL1-208	ENST00000511452	HOXA10	P31260	410 aa	Predicted RBP	6.25	□□□□□ -1.41
NFXL1-208	ENST00000511452	KRTAP19-4	Q3LI73	84 aa		6.25	□□□□□ -1.41
NFXL1-208	ENST00000511452	HGSNAT	Q68CP4	663 aa		6.25	□□□□□ -1.41
NFXL1-208	ENST00000511452	LILRA6	Q6PI73	481 aa		6.25	□□□□□ -1.41
NFXL1-208	ENST00000511452	VN1R5	Q7Z5H4	357 aa		6.25	□□□□□ -1.41
NFXL1-208	ENST00000511452	TMEM238L	A0A1B0GVL6	79 aa		6.24	□□□□□ -1.41
NFXL1-208	ENST00000511452	RBM47	A0AV96	593 aa	Known RBP	6.24	□□□□□ -1.41
NFXL1-208	ENST00000511452	TM4SF5	O14894	197 aa		6.24	□□□□□ -1.41
NFXL1-208	ENST00000511452	ITPKA	P23677	461 aa		6.24	□□□□□ -1.41
NFXL1-208	ENST00000511452	TP53INP2	Q8IXH6	220 aa		6.24	□□□□□ -1.41
NFXL1-208	ENST00000511452	C3orf58	Q8NDZ4	430 aa		6.24	□□□□□ -1.41
NFXL1-208	ENST00000511452	BSND	Q8WZ55	320 aa		6.24	□□□□□ -1.41
NFXL1-208	ENST00000511452	C12orf49	Q9H741	205 aa		6.24	□□□□□ -1.41
NFXL1-208	ENST00000511452	LINC01387	J3KSC0	135 aa		6.23	□□□□□ -1.41
NFXL1-208	ENST00000511452	BUD31	P41223	144 aa	Predicted RBP	6.23	□□□□□ -1.41
NFXL1-208	ENST00000511452	FCGRT	P55899	365 aa		6.23	□□□□□ -1.41
NFXL1-208	ENST00000511452	DAB2	P98082	770 aa		6.23	□□□□□ -1.41
NFXL1-208	ENST00000511452	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	6.23	□□□□□ -1.41
NFXL1-208	ENST00000511452	TMC4	Q7Z404	712 aa		6.23	□□□□□ -1.41
NFXL1-208	ENST00000511452	ZNF428	Q96B54	188 aa		6.23	□□□□□ -1.41
NFXL1-208	ENST00000511452	ZNF576	Q9H609	170 aa		6.23	□□□□□ -1.41
NFXL1-208	ENST00000511452	TRAK1	Q9UPV9	953 aa		6.23	□□□□□ -1.41
NFXL1-208	ENST00000511452	SPG7	Q9UQ90	795 aa		6.23	□□□□□ -1.41
NFXL1-208	ENST00000511452	PPME1	Q9Y570	386 aa		6.23	□□□□□ -1.41
NFXL1-208	ENST00000511452	FAAP100	Q0VG06	881 aa		6.22	□□□□□ -1.41
NFXL1-208	ENST00000511452	SETDB1	Q15047	1291 aa		6.22	□□□□□ -1.41
NFXL1-208	ENST00000511452	GALNT11	Q8NCW6	608 aa		6.22	□□□□□ -1.41
NFXL1-208	ENST00000511452	FBXL18	Q96ME1	805 aa		6.22	□□□□□ -1.41
NFXL1-208	ENST00000511452	CARD10	Q9BWT7	1032 aa		6.22	□□□□□ -1.41
NFXL1-208	ENST00000511452	CEP41	Q9BYV8	373 aa		6.22	□□□□□ -1.41
NFXL1-208	ENST00000511452	CCDC39	Q9UFE4	941 aa		6.22	□□□□□ -1.41
NFXL1-208	ENST00000511452	UNCX	A6NJT0	531 aa		6.21	□□□□□ -1.42
NFXL1-208	ENST00000511452	WDR64	B1ANS9	1081 aa		6.21	□□□□□ -1.42
NFXL1-208	ENST00000511452		H3BRJ5	948 aa		6.21	□□□□□ -1.42
NFXL1-208	ENST00000511452	SOX1	O00570	391 aa	Predicted RBP	6.21	□□□□□ -1.42
NFXL1-208	ENST00000511452	CTSH	P09668	335 aa		6.21	□□□□□ -1.42
NFXL1-208	ENST00000511452	USP17L7	P0C7H9	530 aa		6.21	□□□□□ -1.42
NFXL1-208	ENST00000511452	ESRRA	P11474	423 aa	Predicted RBP	6.21	□□□□□ -1.42
NFXL1-208	ENST00000511452	PSMD2	Q13200	908 aa		6.21	□□□□□ -1.42
NFXL1-208	ENST00000511452	ZNF423	Q2M1K9	1284 aa		6.21	□□□□□ -1.42
NFXL1-208	ENST00000511452	CACTIN-AS1	Q8N1I8	211 aa		6.21	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms