RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 PI16Q6UXB8 463 aa6.65□□□□□ -1.34
PROM1-211ENST00000511153 GPIHBP1Q8IV16 184 aa6.65□□□□□ -1.34
PROM1-211ENST00000511153 RTKN2Q8IZC4 609 aa6.65□□□□□ -1.34
PROM1-211ENST00000511153 VGLL2Q8N8G2 317 aa6.65□□□□□ -1.34
PROM1-211ENST00000511153 EAF2Q96CJ1 260 aaPredicted RBP6.65□□□□□ -1.34
PROM1-211ENST00000511153 ZC3H12CQ9C0D7 883 aaKnown RBP6.65□□□□□ -1.34
PROM1-211ENST00000511153 ANKRD2Q9GZV1 360 aa6.65□□□□□ -1.34
PROM1-211ENST00000511153 DCTPP1Q9H773 170 aa6.65□□□□□ -1.34
PROM1-211ENST00000511153 CDHR5Q9HBB8 845 aa6.65□□□□□ -1.34
PROM1-211ENST00000511153 GJA3Q9Y6H8 435 aa6.65□□□□□ -1.34
PROM1-211ENST00000511153 FPGT-TNNI3KV9GXZ4 949 aa6.65□□□□□ -1.34
PROM1-211ENST00000511153 CHD4Q14839 1912 aa6.65□□□□□ -1.34
PROM1-211ENST00000511153 LRRC37AA6NMS7 1700 aa6.65□□□□□ -1.34
PROM1-211ENST00000511153 SBF1O95248 1867 aa6.65□□□□□ -1.34
PROM1-211ENST00000511153 SHTN1A0MZ66 631 aa6.65□□□□□ -1.35
PROM1-211ENST00000511153 F8W031 263 aaPredicted RBP6.65□□□□□ -1.35
PROM1-211ENST00000511153 GPR37O15354 613 aa6.65□□□□□ -1.35
PROM1-211ENST00000511153 ECE2O60344 883 aa6.65□□□□□ -1.35
PROM1-211ENST00000511153 FRAT2O75474 233 aaPredicted RBP6.65□□□□□ -1.35
PROM1-211ENST00000511153 CIAO1O76071 339 aa6.65□□□□□ -1.35
PROM1-211ENST00000511153 IFIT2P09913 472 aaKnown RBP6.65□□□□□ -1.35
PROM1-211ENST00000511153 SLC5A1P13866 664 aa6.65□□□□□ -1.35
PROM1-211ENST00000511153 HDAC1Q13547 482 aaPredicted RBP6.65□□□□□ -1.35
PROM1-211ENST00000511153 SCARF1Q14162 830 aa6.65□□□□□ -1.35
PROM1-211ENST00000511153 PUM3Q15397 648 aaKnown RBP6.65□□□□□ -1.35
PROM1-211ENST00000511153 VPS37DQ86XT2 251 aa6.65□□□□□ -1.35
PROM1-211ENST00000511153 NIM1KQ8IY84 436 aa6.65□□□□□ -1.35
PROM1-211ENST00000511153 ZNF454Q8N9F8 522 aa6.65□□□□□ -1.35
PROM1-211ENST00000511153 EDC3Q96F86 508 aaKnown RBP6.65□□□□□ -1.35
PROM1-211ENST00000511153 XAGE2Q96GT9 111 aa6.65□□□□□ -1.35
PROM1-211ENST00000511153 LRRCC1Q9C099 1032 aa6.65□□□□□ -1.35
PROM1-211ENST00000511153 DBNLQ9UJU6 430 aaKnown RBP6.65□□□□□ -1.35
PROM1-211ENST00000511153 NOP58Q9Y2X3 529 aaKnown RBP6.65□□□□□ -1.35
PROM1-211ENST00000511153 ZNF541Q9H0D2 1346 aa6.64□□□□□ -1.35
PROM1-211ENST00000511153 SCN9AQ15858 1988 aa6.64□□□□□ -1.35
PROM1-211ENST00000511153 ZNF609O15014 1411 aa6.64□□□□□ -1.35
PROM1-211ENST00000511153 LTBP1Q14766 1721 aa6.64□□□□□ -1.35
PROM1-211ENST00000511153 YDJCA8MPS7 323 aa6.64□□□□□ -1.35
PROM1-211ENST00000511153 IFIT1P09914 478 aaKnown RBP6.64□□□□□ -1.35
PROM1-211ENST00000511153 FGFR2P21802 821 aa6.64□□□□□ -1.35
PROM1-211ENST00000511153 FECHP22830 423 aa6.64□□□□□ -1.35
PROM1-211ENST00000511153 RGS3P49796 1198 aa6.64□□□□□ -1.35
PROM1-211ENST00000511153 TTC39AQ5SRH9 613 aa6.64□□□□□ -1.35
PROM1-211ENST00000511153 TBC1D9Q6ZT07 1266 aa6.64□□□□□ -1.35
PROM1-211ENST00000511153 KIF1BPQ96EK5 621 aa6.64□□□□□ -1.35
PROM1-211ENST00000511153 PPP4R2Q9NY27 417 aa6.64□□□□□ -1.35
PROM1-211ENST00000511153 SNED1Q8TER0 1413 aa6.63□□□□□ -1.35
PROM1-211ENST00000511153 ZMYND10O75800 440 aa6.63□□□□□ -1.35
PROM1-211ENST00000511153 HOXB1P14653 301 aaPredicted RBP6.63□□□□□ -1.35
PROM1-211ENST00000511153 LMNB1P20700 586 aa6.63□□□□□ -1.35
PROM1-211ENST00000511153 HIBADHP31937 336 aaKnown RBP6.63□□□□□ -1.35
PROM1-211ENST00000511153 FOSBP53539 338 aa6.63□□□□□ -1.35
PROM1-211ENST00000511153 GTF2IP78347 998 aa6.63□□□□□ -1.35
PROM1-211ENST00000511153 GRIK5Q16478 980 aa6.63□□□□□ -1.35
PROM1-211ENST00000511153 SLFNL1Q499Z3 407 aa6.63□□□□□ -1.35
PROM1-211ENST00000511153 CCDC102BQ68D86 513 aa6.63□□□□□ -1.35
PROM1-211ENST00000511153 TMC4Q7Z404 712 aa6.63□□□□□ -1.35
PROM1-211ENST00000511153 ERC1Q8IUD2 1116 aa6.63□□□□□ -1.35
PROM1-211ENST00000511153 CLASRPQ8N2M8 674 aaKnown RBP6.63□□□□□ -1.35
PROM1-211ENST00000511153 LPIN2Q92539 896 aa6.63□□□□□ -1.35
PROM1-211ENST00000511153 FAM84BQ96KN1 310 aaPredicted RBP6.63□□□□□ -1.35
PROM1-211ENST00000511153 EYA3Q99504 573 aa6.63□□□□□ -1.35
PROM1-211ENST00000511153 DNAJC2Q99543 621 aaKnown RBP6.63□□□□□ -1.35
PROM1-211ENST00000511153 BOLA2Q9H3K6 86 aa6.63□□□□□ -1.35
PROM1-211ENST00000511153 SLC24A3Q9HC58 644 aa6.63□□□□□ -1.35
PROM1-211ENST00000511153 PODXL2Q9NZ53 605 aa6.63□□□□□ -1.35
PROM1-211ENST00000511153 SCAF8Q9UPN6 1271 aaKnown RBP6.63□□□□□ -1.35
PROM1-211ENST00000511153 LEMD3Q9Y2U8 911 aa6.63□□□□□ -1.35
PROM1-211ENST00000511153 TIAM2Q8IVF5 1701 aa6.62□□□□□ -1.35
PROM1-211ENST00000511153 MYO5AQ9Y4I1 1855 aaKnown RBP6.62□□□□□ -1.35
PROM1-211ENST00000511153 ST18O60284 1047 aa6.62□□□□□ -1.35
PROM1-211ENST00000511153 GRIN3BO60391 1043 aa6.62□□□□□ -1.35
PROM1-211ENST00000511153 RAB11FIP3O75154 756 aa6.62□□□□□ -1.35
PROM1-211ENST00000511153 DDNO94850 711 aaPredicted RBP6.62□□□□□ -1.35
PROM1-211ENST00000511153 CHGBP05060 677 aa6.62□□□□□ -1.35
PROM1-211ENST00000511153 KIAA2012Q0VF49 1180 aa6.62□□□□□ -1.35
PROM1-211ENST00000511153 UBE4AQ14139 1066 aa6.62□□□□□ -1.35
PROM1-211ENST00000511153 HSP90AB4PQ58FF6 505 aa6.62□□□□□ -1.35
PROM1-211ENST00000511153 CAVIN4Q5BKX8 364 aa6.62□□□□□ -1.35
PROM1-211ENST00000511153 SOGA3Q5TF21 947 aa6.62□□□□□ -1.35
PROM1-211ENST00000511153 SUPT20HQ8NEM7 779 aa6.62□□□□□ -1.35
PROM1-211ENST00000511153 MARVELD3Q96A59 401 aa6.62□□□□□ -1.35
PROM1-211ENST00000511153 FAM163AQ96GL9 167 aaPredicted RBP6.62□□□□□ -1.35
PROM1-211ENST00000511153 PSMD1Q99460 953 aa6.62□□□□□ -1.35
PROM1-211ENST00000511153 ADAM33Q9BZ11 813 aa6.62□□□□□ -1.35
PROM1-211ENST00000511153 ZSWIM6Q9HCJ5 1215 aa6.62□□□□□ -1.35
PROM1-211ENST00000511153 CD209Q9NNX6 404 aa6.62□□□□□ -1.35
PROM1-211ENST00000511153 AKAP2Q9Y2D5 859 aa6.62□□□□□ -1.35
PROM1-211ENST00000511153 PCDHAC2Q9Y5I4 1007 aa6.62□□□□□ -1.35
PROM1-211ENST00000511153 MYH13Q9UKX3 1938 aa6.62□□□□□ -1.35
PROM1-211ENST00000511153 COL1A1P02452 1464 aaPredicted RBP6.62□□□□□ -1.35
PROM1-211ENST00000511153 PSMD14O00487 310 aa6.61□□□□□ -1.35
PROM1-211ENST00000511153 SNPHO15079 494 aa6.61□□□□□ -1.35
PROM1-211ENST00000511153 MAP3K7O43318 606 aa6.61□□□□□ -1.35
PROM1-211ENST00000511153 ZAP70P43403 619 aa6.61□□□□□ -1.35
PROM1-211ENST00000511153 SCNN1DP51172 638 aa6.61□□□□□ -1.35
PROM1-211ENST00000511153 NUCB1Q02818 461 aa6.61□□□□□ -1.35
PROM1-211ENST00000511153 CXCL9Q07325 125 aa6.61□□□□□ -1.35
PROM1-211ENST00000511153 RASGRF1Q13972 1273 aa6.61□□□□□ -1.35
PROM1-211ENST00000511153 CC2D2BQ6DHV5 1058 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms