RNA–Protein interactions for RNA: ENST00000510997.1

CALCOCO2-218, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 674 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-218ENST00000510997 NLRP2Q9NX02 1062 aa8.49□□□□□ -1.05
CALCOCO2-218ENST00000510997 RAD54L2Q9Y4B4 1467 aa8.49□□□□□ -1.05
CALCOCO2-218ENST00000510997 ABCA10Q8WWZ4 1543 aa8.49□□□□□ -1.05
CALCOCO2-218ENST00000510997 ITPKAP23677 461 aa8.48□□□□□ -1.05
CALCOCO2-218ENST00000510997 GATA4P43694 442 aa8.48□□□□□ -1.05
CALCOCO2-218ENST00000510997 PTPN12Q05209 780 aaKnown RBP8.48□□□□□ -1.05
CALCOCO2-218ENST00000510997 IKBKEQ14164 716 aa8.48□□□□□ -1.05
CALCOCO2-218ENST00000510997 FOXD4L6Q3SYB3 417 aaPredicted RBP8.48□□□□□ -1.05
CALCOCO2-218ENST00000510997 FOXD4L3Q6VB84 417 aaPredicted RBP8.48□□□□□ -1.05
CALCOCO2-218ENST00000510997 SOX17Q9H6I2 414 aaPredicted RBP8.48□□□□□ -1.05
CALCOCO2-218ENST00000510997 ABCB6Q9NP58 842 aa8.48□□□□□ -1.05
CALCOCO2-218ENST00000510997 KCNK4Q9NYG8 393 aa8.48□□□□□ -1.05
CALCOCO2-218ENST00000510997 TRAK1Q9UPV9 953 aa8.48□□□□□ -1.05
CALCOCO2-218ENST00000510997 EEA1Q15075 1411 aa8.47□□□□□ -1.05
CALCOCO2-218ENST00000510997 ERCC6Q03468 1493 aa8.47□□□□□ -1.05
CALCOCO2-218ENST00000510997 RECKO95980 971 aa8.47□□□□□ -1.05
CALCOCO2-218ENST00000510997 ESRRAP11474 423 aaPredicted RBP8.47□□□□□ -1.05
CALCOCO2-218ENST00000510997 SUZ12Q15022 739 aaKnown RBP8.47□□□□□ -1.05
CALCOCO2-218ENST00000510997 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.47□□□□□ -1.05
CALCOCO2-218ENST00000510997 HGSNATQ68CP4 663 aa8.47□□□□□ -1.05
CALCOCO2-218ENST00000510997 ALG1LQ6GMV1 187 aa8.47□□□□□ -1.05
CALCOCO2-218ENST00000510997 C8orf37Q96NL8 207 aa8.47□□□□□ -1.05
CALCOCO2-218ENST00000510997 SETDB2Q96T68 719 aa8.47□□□□□ -1.05
CALCOCO2-218ENST00000510997 CLEC4MQ9H2X3 399 aaPredicted RBP8.47□□□□□ -1.05
CALCOCO2-218ENST00000510997 USP21Q9UK80 565 aa8.47□□□□□ -1.05
CALCOCO2-218ENST00000510997 WWC3Q9ULE0 1092 aa8.47□□□□□ -1.05
CALCOCO2-218ENST00000510997 TMEM238LA0A1B0GVL6 79 aa8.46□□□□□ -1.06
CALCOCO2-218ENST00000510997 ADAM11O75078 769 aa8.46□□□□□ -1.06
CALCOCO2-218ENST00000510997 C19orf57Q0VDD7 668 aa8.46□□□□□ -1.06
CALCOCO2-218ENST00000510997 EAPPQ56P03 285 aaPredicted RBP8.46□□□□□ -1.06
CALCOCO2-218ENST00000510997 TXNRD3Q86VQ6 643 aa8.46□□□□□ -1.06
CALCOCO2-218ENST00000510997 WFDC12Q8WWY7 111 aa8.46□□□□□ -1.06
CALCOCO2-218ENST00000510997 BCO2Q9BYV7 579 aa8.46□□□□□ -1.06
CALCOCO2-218ENST00000510997 ARL4DP49703 201 aa8.45□□□□□ -1.06
CALCOCO2-218ENST00000510997 PCDH1Q08174 1060 aa8.45□□□□□ -1.06
CALCOCO2-218ENST00000510997 ZNF423Q2M1K9 1284 aa8.45□□□□□ -1.06
CALCOCO2-218ENST00000510997 SLC7A3Q8WY07 619 aa8.45□□□□□ -1.06
CALCOCO2-218ENST00000510997 ZNF576Q9H609 170 aa8.45□□□□□ -1.06
CALCOCO2-218ENST00000510997 F8W735 103 aaPredicted RBP8.44□□□□□ -1.06
CALCOCO2-218ENST00000510997 DDX3YO15523 660 aaKnown RBP8.44□□□□□ -1.06
CALCOCO2-218ENST00000510997 WISP1O95388 367 aa8.44□□□□□ -1.06
CALCOCO2-218ENST00000510997 NOS3P29474 1203 aa8.44□□□□□ -1.06
CALCOCO2-218ENST00000510997 ATP2B2Q01814 1243 aa8.44□□□□□ -1.06
CALCOCO2-218ENST00000510997 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.44□□□□□ -1.06
CALCOCO2-218ENST00000510997 SSBP4Q9BWG4 385 aaPredicted RBP8.44□□□□□ -1.06
CALCOCO2-218ENST00000510997 ABCA5Q8WWZ7 1642 aa8.43□□□□□ -1.06
CALCOCO2-218ENST00000510997 LDHBP07195 334 aaKnown RBP8.43□□□□□ -1.06
CALCOCO2-218ENST00000510997 IREB2P48200 963 aaKnown RBP8.43□□□□□ -1.06
CALCOCO2-218ENST00000510997 RPS26P11Q5JNZ5 115 aaPredicted RBP8.43□□□□□ -1.06
CALCOCO2-218ENST00000510997 NXPE4Q6UWF7 544 aa8.43□□□□□ -1.06
CALCOCO2-218ENST00000510997 Q6ZS46 218 aa8.43□□□□□ -1.06
CALCOCO2-218ENST00000510997 PUS7Q96PZ0 661 aaKnown RBP8.43□□□□□ -1.06
CALCOCO2-218ENST00000510997 AKTIPQ9H8T0 292 aa8.43□□□□□ -1.06
CALCOCO2-218ENST00000510997 PPP4R2Q9NY27 417 aa8.43□□□□□ -1.06
CALCOCO2-218ENST00000510997 KIF27Q86VH2 1401 aa8.43□□□□□ -1.06
CALCOCO2-218ENST00000510997 IFT140Q96RY7 1462 aa8.43□□□□□ -1.06
CALCOCO2-218ENST00000510997 GIPC1O14908 333 aa8.42□□□□□ -1.06
CALCOCO2-218ENST00000510997 EIF4EBP3O60516 100 aaPredicted RBP8.42□□□□□ -1.06
CALCOCO2-218ENST00000510997 B3GALT4O96024 378 aa8.42□□□□□ -1.06
CALCOCO2-218ENST00000510997 DUOXA2Q1HG44 320 aa8.42□□□□□ -1.06
CALCOCO2-218ENST00000510997 KIAA1211Q6ZU35 1233 aa8.42□□□□□ -1.06
CALCOCO2-218ENST00000510997 SREK1Q8WXA9 508 aaKnown RBP8.42□□□□□ -1.06
CALCOCO2-218ENST00000510997 OSBPL7Q9BZF2 842 aa8.42□□□□□ -1.06
CALCOCO2-218ENST00000510997 PRXQ9BXM0 1461 aa8.42□□□□□ -1.06
CALCOCO2-218ENST00000510997 PRPF40AO75400 957 aaKnown RBP8.41□□□□□ -1.06
CALCOCO2-218ENST00000510997 ALX3O95076 343 aa8.41□□□□□ -1.06
CALCOCO2-218ENST00000510997 XRCC5P13010 732 aaKnown RBP8.41□□□□□ -1.06
CALCOCO2-218ENST00000510997 HSP90B1P14625 803 aaKnown RBP8.41□□□□□ -1.06
CALCOCO2-218ENST00000510997 NLRP12P59046 1061 aa8.41□□□□□ -1.06
CALCOCO2-218ENST00000510997 FAM177A1Q8N128 213 aaPredicted RBP8.41□□□□□ -1.06
CALCOCO2-218ENST00000510997 UBASH3BQ8TF42 649 aa8.41□□□□□ -1.06
CALCOCO2-218ENST00000510997 DRC1Q96MC2 740 aa8.41□□□□□ -1.06
CALCOCO2-218ENST00000510997 SRCIN1Q9C0H9 1055 aa8.41□□□□□ -1.06
CALCOCO2-218ENST00000510997 NRSN2Q9GZP1 204 aa8.41□□□□□ -1.06
CALCOCO2-218ENST00000510997 ZFYVE1Q9HBF4 777 aa8.41□□□□□ -1.06
CALCOCO2-218ENST00000510997 TPSG1Q9NRR2 321 aa8.41□□□□□ -1.06
CALCOCO2-218ENST00000510997 HMGB1P09429 215 aaKnown RBP8.4□□□□□ -1.06
CALCOCO2-218ENST00000510997 FCGRTP55899 365 aa8.4□□□□□ -1.06
CALCOCO2-218ENST00000510997 ZC3H6P61129 1189 aaKnown RBP8.4□□□□□ -1.06
CALCOCO2-218ENST00000510997 FGD1P98174 961 aa8.4□□□□□ -1.06
CALCOCO2-218ENST00000510997 DOC2BQ14184 412 aa8.4□□□□□ -1.06
CALCOCO2-218ENST00000510997 DTHD1Q6ZMT9 781 aa8.4□□□□□ -1.06
CALCOCO2-218ENST00000510997 ACAD11Q709F0 780 aa8.4□□□□□ -1.06
CALCOCO2-218ENST00000510997 DZIP1LQ8IYY4 767 aaKnown RBP8.4□□□□□ -1.06
CALCOCO2-218ENST00000510997 C3orf58Q8NDZ4 430 aa8.4□□□□□ -1.06
CALCOCO2-218ENST00000510997 FRMD6Q96NE9 622 aa8.4□□□□□ -1.06
CALCOCO2-218ENST00000510997 ZNF608Q9ULD9 1512 aaPredicted RBP8.39□□□□□ -1.07
CALCOCO2-218ENST00000510997 GSTM4Q03013 218 aa8.39□□□□□ -1.07
CALCOCO2-218ENST00000510997 FAAP100Q0VG06 881 aa8.39□□□□□ -1.07
CALCOCO2-218ENST00000510997 TSNAXIP1Q2TAA8 658 aa8.39□□□□□ -1.07
CALCOCO2-218ENST00000510997 FAM9AQ8IZU1 332 aaPredicted RBP8.39□□□□□ -1.07
CALCOCO2-218ENST00000510997 AGGF1Q8N302 714 aaeCLIP8.39□□□□□ -1.07
CALCOCO2-218ENST00000510997 MEGF10Q96KG7 1140 aa8.39□□□□□ -1.07
CALCOCO2-218ENST00000510997 SPG7Q9UQ90 795 aa8.39□□□□□ -1.07
CALCOCO2-218ENST00000510997 KIF21BO75037 1637 aa8.39□□□□□ -1.07
CALCOCO2-218ENST00000510997 TDRD9Q8NDG6 1382 aaKnown RBP8.38□□□□□ -1.07
CALCOCO2-218ENST00000510997 MEGF11A6BM72 1044 aa8.38□□□□□ -1.07
CALCOCO2-218ENST00000510997 GAPVD1Q14C86 1478 aa8.38□□□□□ -1.07
CALCOCO2-218ENST00000510997 LOC100289279A0A1B0GTE1 492 aa8.37□□□□□ -1.07
CALCOCO2-218ENST00000510997 DLGAP3O95886 979 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms