RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.48□□□□□ -1.21
NFKB1-208ENST00000509165 DNAJC14Q6Y2X3 702 aaPredicted RBP7.48□□□□□ -1.21
NFKB1-208ENST00000509165 FBF1Q8TES7 1133 aa7.48□□□□□ -1.21
NFKB1-208ENST00000509165 UBL7Q96S82 380 aaPredicted RBP7.48□□□□□ -1.21
NFKB1-208ENST00000509165 NLRP2Q9NX02 1062 aa7.48□□□□□ -1.21
NFKB1-208ENST00000509165 TRAK1Q9UPV9 953 aa7.48□□□□□ -1.21
NFKB1-208ENST00000509165 B3GALT4O96024 378 aa7.47□□□□□ -1.21
NFKB1-208ENST00000509165 H2AFB1P0C5Y9 115 aa7.47□□□□□ -1.21
NFKB1-208ENST00000509165 H2AFB2P0C5Z0 115 aa7.47□□□□□ -1.21
NFKB1-208ENST00000509165 TP53INP1Q96A56 240 aa7.47□□□□□ -1.21
NFKB1-208ENST00000509165 BCO2Q9BYV7 579 aa7.47□□□□□ -1.21
NFKB1-208ENST00000509165 CUX2O14529 1486 aa7.47□□□□□ -1.21
NFKB1-208ENST00000509165 DLGAP3O95886 979 aa7.46□□□□□ -1.22
NFKB1-208ENST00000509165 FAAP100Q0VG06 881 aa7.46□□□□□ -1.22
NFKB1-208ENST00000509165 EIF4G1Q04637 1599 aaKnown RBP7.46□□□□□ -1.22
NFKB1-208ENST00000509165 LOC100289279A0A1B0GTE1 492 aa7.45□□□□□ -1.22
NFKB1-208ENST00000509165 MEGF11A6BM72 1044 aa7.45□□□□□ -1.22
NFKB1-208ENST00000509165 ANKRD33BA6NCL7 494 aa7.45□□□□□ -1.22
NFKB1-208ENST00000509165 GSTM4Q03013 218 aa7.45□□□□□ -1.22
NFKB1-208ENST00000509165 COL19A1Q14993 1142 aa7.45□□□□□ -1.22
NFKB1-208ENST00000509165 RPS26P11Q5JNZ5 115 aaPredicted RBP7.45□□□□□ -1.22
NFKB1-208ENST00000509165 ALG1LQ6GMV1 187 aa7.45□□□□□ -1.22
NFKB1-208ENST00000509165 NXPE4Q6UWF7 544 aa7.45□□□□□ -1.22
NFKB1-208ENST00000509165 TRIM56Q9BRZ2 755 aaKnown RBP7.45□□□□□ -1.22
NFKB1-208ENST00000509165 OSBPL7Q9BZF2 842 aa7.45□□□□□ -1.22
NFKB1-208ENST00000509165 GZF1Q9H116 711 aaPredicted RBP7.45□□□□□ -1.22
NFKB1-208ENST00000509165 CTSBP07858 339 aa7.44□□□□□ -1.22
NFKB1-208ENST00000509165 GLB1P16278 677 aa7.44□□□□□ -1.22
NFKB1-208ENST00000509165 FCGRTP55899 365 aa7.44□□□□□ -1.22
NFKB1-208ENST00000509165 MCTP1Q6DN14 999 aa7.44□□□□□ -1.22
NFKB1-208ENST00000509165 NPAS4Q8IUM7 802 aa7.44□□□□□ -1.22
NFKB1-208ENST00000509165 C3orf58Q8NDZ4 430 aa7.44□□□□□ -1.22
NFKB1-208ENST00000509165 FAM46AQ96IP4 442 aaKnown RBP7.44□□□□□ -1.22
NFKB1-208ENST00000509165 RUSC1Q9BVN2 902 aa7.44□□□□□ -1.22
NFKB1-208ENST00000509165 TMPRSS13Q9BYE2 586 aa7.44□□□□□ -1.22
NFKB1-208ENST00000509165 RNF208Q9H0X6 261 aa7.44□□□□□ -1.22
NFKB1-208ENST00000509165 EIF4EBP3O60516 100 aaPredicted RBP7.43□□□□□ -1.22
NFKB1-208ENST00000509165 ARMC10Q8N2F6 343 aa7.43□□□□□ -1.22
NFKB1-208ENST00000509165 USP26Q9BXU7 913 aa7.43□□□□□ -1.22
NFKB1-208ENST00000509165 CEP41Q9BYV8 373 aa7.43□□□□□ -1.22
NFKB1-208ENST00000509165 LDHBP07195 334 aaKnown RBP7.42□□□□□ -1.22
NFKB1-208ENST00000509165 XRCC5P13010 732 aaKnown RBP7.42□□□□□ -1.22
NFKB1-208ENST00000509165 SUGCTQ9HAC7 445 aa7.42□□□□□ -1.22
NFKB1-208ENST00000509165 ECEL1O95672 775 aa7.41□□□□□ -1.22
NFKB1-208ENST00000509165 MAOBP27338 520 aa7.41□□□□□ -1.22
NFKB1-208ENST00000509165 PREPP48147 710 aa7.41□□□□□ -1.22
NFKB1-208ENST00000509165 ATP2B2Q01814 1243 aa7.41□□□□□ -1.22
NFKB1-208ENST00000509165 ANKRD34AQ69YU3 496 aa7.41□□□□□ -1.22
NFKB1-208ENST00000509165 DTHD1Q6ZMT9 781 aa7.41□□□□□ -1.22
NFKB1-208ENST00000509165 PRR23CQ6ZRP0 262 aa7.41□□□□□ -1.22
NFKB1-208ENST00000509165 SMG8Q8ND04 991 aaKnown RBP7.41□□□□□ -1.22
NFKB1-208ENST00000509165 SRCIN1Q9C0H9 1055 aa7.41□□□□□ -1.22
NFKB1-208ENST00000509165 GIPC1O14908 333 aa7.4□□□□□ -1.22
NFKB1-208ENST00000509165 TIAF1O95411 115 aa7.4□□□□□ -1.22
NFKB1-208ENST00000509165 CYP11A1P05108 521 aa7.4□□□□□ -1.22
NFKB1-208ENST00000509165 YBX3P16989 372 aaKnown RBP eCLIP7.4□□□□□ -1.22
NFKB1-208ENST00000509165 ZNF157P51786 506 aaPredicted RBP7.4□□□□□ -1.22
NFKB1-208ENST00000509165 POU4F3Q15319 338 aa7.4□□□□□ -1.22
NFKB1-208ENST00000509165 EXOSC6Q5RKV6 272 aaKnown RBP7.4□□□□□ -1.22
NFKB1-208ENST00000509165 KRTAP4-9Q9BYQ8 210 aa7.4□□□□□ -1.22
NFKB1-208ENST00000509165 RNF19AQ9NV58 838 aa7.4□□□□□ -1.22
NFKB1-208ENST00000509165 PPP4R2Q9NY27 417 aa7.4□□□□□ -1.22
NFKB1-208ENST00000509165 PRPF40AO75400 957 aaKnown RBP7.39□□□□□ -1.23
NFKB1-208ENST00000509165 UVSSAQ2YD98 709 aa7.39□□□□□ -1.23
NFKB1-208ENST00000509165 HOMEZQ8IX15 550 aa7.39□□□□□ -1.23
NFKB1-208ENST00000509165 ANKRD24Q8TF21 1146 aa7.39□□□□□ -1.23
NFKB1-208ENST00000509165 C12orf49Q9H741 205 aa7.39□□□□□ -1.23
NFKB1-208ENST00000509165 ZFYVE1Q9HBF4 777 aa7.39□□□□□ -1.23
NFKB1-208ENST00000509165 GSTT1P30711 240 aa7.38□□□□□ -1.23
NFKB1-208ENST00000509165 TXKP42681 527 aa7.38□□□□□ -1.23
NFKB1-208ENST00000509165 AP3B2Q13367 1082 aa7.38□□□□□ -1.23
NFKB1-208ENST00000509165 CCDC27Q2M243 656 aa7.38□□□□□ -1.23
NFKB1-208ENST00000509165 EAPPQ56P03 285 aaPredicted RBP7.38□□□□□ -1.23
NFKB1-208ENST00000509165 NUTM2GQ5VZR2 741 aa7.38□□□□□ -1.23
NFKB1-208ENST00000509165 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.38□□□□□ -1.23
NFKB1-208ENST00000509165 FBXO33Q7Z6M2 555 aa7.38□□□□□ -1.23
NFKB1-208ENST00000509165 DDX54Q8TDD1 881 aaKnown RBP7.38□□□□□ -1.23
NFKB1-208ENST00000509165 MYRFLQ96LU7 910 aa7.38□□□□□ -1.23
NFKB1-208ENST00000509165 FRMD6Q96NE9 622 aa7.38□□□□□ -1.23
NFKB1-208ENST00000509165 SPG7Q9UQ90 795 aa7.38□□□□□ -1.23
NFKB1-208ENST00000509165 AKAP2Q9Y2D5 859 aa7.38□□□□□ -1.23
NFKB1-208ENST00000509165 PAX4O43316 350 aa7.37□□□□□ -1.23
NFKB1-208ENST00000509165 GNA15P30679 374 aa7.37□□□□□ -1.23
NFKB1-208ENST00000509165 FDX2Q6P4F2 183 aa7.37□□□□□ -1.23
NFKB1-208ENST00000509165 STK35Q8TDR2 534 aa7.37□□□□□ -1.23
NFKB1-208ENST00000509165 UTP4Q969X6 686 aaKnown RBP7.37□□□□□ -1.23
NFKB1-208ENST00000509165 CYP4F12Q9HCS2 524 aa7.37□□□□□ -1.23
NFKB1-208ENST00000509165 TMEM39AQ9NV64 488 aa7.37□□□□□ -1.23
NFKB1-208ENST00000509165 RAXQ9Y2V3 346 aa7.37□□□□□ -1.23
NFKB1-208ENST00000509165 DRD2P14416 443 aa7.36□□□□□ -1.23
NFKB1-208ENST00000509165 PDZD3Q86UT5 571 aa7.36□□□□□ -1.23
NFKB1-208ENST00000509165 FAM20CQ8IXL6 584 aa7.36□□□□□ -1.23
NFKB1-208ENST00000509165 NECAB3Q96P71 396 aaPredicted RBP7.36□□□□□ -1.23
NFKB1-208ENST00000509165 DUSP9Q99956 384 aaKnown RBP7.36□□□□□ -1.23
NFKB1-208ENST00000509165 CORO1BQ9BR76 489 aa7.36□□□□□ -1.23
NFKB1-208ENST00000509165 FAM8A1Q9UBU6 413 aa7.36□□□□□ -1.23
NFKB1-208ENST00000509165 GPN3Q9UHW5 284 aaPredicted RBP7.36□□□□□ -1.23
NFKB1-208ENST00000509165 PPM1HQ9ULR3 514 aa7.36□□□□□ -1.23
NFKB1-208ENST00000509165 ENC1O14682 589 aa7.35□□□□□ -1.23
NFKB1-208ENST00000509165 DHX15O43143 795 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms